RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 S100ZQ8WXG8 99 aa8.54□□□□□ -1.04
LIG1-211ENST00000596457 GPR146Q96CH1 333 aa8.54□□□□□ -1.04
LIG1-211ENST00000596457 SLC25A21Q9BQT8 299 aaPredicted RBP8.54□□□□□ -1.04
LIG1-211ENST00000596457 PTTG2Q9NZH5 202 aa8.54□□□□□ -1.04
LIG1-211ENST00000596457 FLVCR2Q9UPI3 526 aa8.54□□□□□ -1.04
LIG1-211ENST00000596457 VWFP04275 2813 aa8.54□□□□□ -1.04
LIG1-211ENST00000596457 PPP5D1E7EU14 171 aa8.53□□□□□ -1.04
LIG1-211ENST00000596457 CYB5BO43169 146 aa8.53□□□□□ -1.04
LIG1-211ENST00000596457 FGF2P09038 288 aa8.53□□□□□ -1.04
LIG1-211ENST00000596457 SUPT4H1P63272 117 aaKnown RBP8.53□□□□□ -1.04
LIG1-211ENST00000596457 ERHP84090 104 aaKnown RBP8.53□□□□□ -1.04
LIG1-211ENST00000596457 PRCDQ00LT1 54 aa8.53□□□□□ -1.04
LIG1-211ENST00000596457 RPEL1Q2QD12 228 aa8.53□□□□□ -1.04
LIG1-211ENST00000596457 C9orf66Q5T8R8 295 aa8.53□□□□□ -1.04
LIG1-211ENST00000596457 CLEC19AQ6UXS0 136 aa8.53□□□□□ -1.04
LIG1-211ENST00000596457 Q6ZRM9 215 aa8.53□□□□□ -1.04
LIG1-211ENST00000596457 LYZL2Q7Z4W2 148 aa8.53□□□□□ -1.04
LIG1-211ENST00000596457 HSD17B13Q7Z5P4 300 aaPredicted RBP8.53□□□□□ -1.04
LIG1-211ENST00000596457 LGI3Q8N145 548 aa8.53□□□□□ -1.04
LIG1-211ENST00000596457 EEF1AKMT3Q96AZ1 226 aa8.53□□□□□ -1.04
LIG1-211ENST00000596457 GALNT14Q96FL9 552 aa8.53□□□□□ -1.04
LIG1-211ENST00000596457 C7orf50Q9BRJ6 194 aaKnown RBP8.53□□□□□ -1.04
LIG1-211ENST00000596457 SRSF8Q9BRL6 282 aaKnown RBP8.53□□□□□ -1.04
LIG1-211ENST00000596457 GPR61Q9BZJ8 451 aa8.53□□□□□ -1.04
LIG1-211ENST00000596457 PLEKHA3Q9HB20 300 aa8.53□□□□□ -1.04
LIG1-211ENST00000596457 ENY2Q9NPA8 101 aa8.53□□□□□ -1.04
LIG1-211ENST00000596457 ZC4H2Q9NQZ6 224 aa8.53□□□□□ -1.04
LIG1-211ENST00000596457 THYN1Q9P016 225 aa8.53□□□□□ -1.04
LIG1-211ENST00000596457 CACNG5Q9UF02 275 aa8.53□□□□□ -1.04
LIG1-211ENST00000596457 IGLV11-55A0A075B6I3 123 aa8.52□□□□□ -1.05
LIG1-211ENST00000596457 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.52□□□□□ -1.05
LIG1-211ENST00000596457 MFSD2BA6NFX1 497 aa8.52□□□□□ -1.05
LIG1-211ENST00000596457 PLA2G10O15496 165 aa8.52□□□□□ -1.05
LIG1-211ENST00000596457 LYRM1O43325 122 aa8.52□□□□□ -1.05
LIG1-211ENST00000596457 SAP30O75446 220 aa8.52□□□□□ -1.05
LIG1-211ENST00000596457 NDUFB6O95139 128 aa8.52□□□□□ -1.05
LIG1-211ENST00000596457 P0C879 139 aa8.52□□□□□ -1.05
LIG1-211ENST00000596457 ZP3P21754 424 aa8.52□□□□□ -1.05
LIG1-211ENST00000596457 HOXA1P49639 335 aaPredicted RBP8.52□□□□□ -1.05
LIG1-211ENST00000596457 SYNJ2BPP57105 145 aa8.52□□□□□ -1.05
LIG1-211ENST00000596457 PPP1R1AQ13522 171 aa8.52□□□□□ -1.05
LIG1-211ENST00000596457 ZNF846Q147U1 533 aa8.52□□□□□ -1.05
LIG1-211ENST00000596457 TMEM128Q5BJH2 165 aa8.52□□□□□ -1.05
LIG1-211ENST00000596457 FAM219AQ8IW50 185 aa8.52□□□□□ -1.05
LIG1-211ENST00000596457 MISP3Q96FF7 219 aa8.52□□□□□ -1.05
LIG1-211ENST00000596457 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.52□□□□□ -1.05
LIG1-211ENST00000596457 DMRT1Q9Y5R6 373 aa8.52□□□□□ -1.05
LIG1-211ENST00000596457 F11RQ9Y624 299 aaKnown RBP8.52□□□□□ -1.05
LIG1-211ENST00000596457 TMEM56-RWDD3S4R434 201 aa8.52□□□□□ -1.05
LIG1-211ENST00000596457 OR2C1O95371 312 aa8.51□□□□□ -1.05
LIG1-211ENST00000596457 SFT2D2O95562 160 aa8.51□□□□□ -1.05
LIG1-211ENST00000596457 HLA-AP01891 365 aaKnown RBP8.51□□□□□ -1.05
LIG1-211ENST00000596457 BTCP35070 178 aa8.51□□□□□ -1.05
LIG1-211ENST00000596457 ARL3P36405 182 aa8.51□□□□□ -1.05
LIG1-211ENST00000596457 SNCAP37840 140 aa8.51□□□□□ -1.05
LIG1-211ENST00000596457 MFAP2P55001 183 aa8.51□□□□□ -1.05
LIG1-211ENST00000596457 KRTAP10-11P60412 298 aa8.51□□□□□ -1.05
LIG1-211ENST00000596457 TATDN3Q17R31 274 aa8.51□□□□□ -1.05
LIG1-211ENST00000596457 ANKRD55Q3KP44 614 aa8.51□□□□□ -1.05
LIG1-211ENST00000596457 ZNF429Q86V71 674 aa8.51□□□□□ -1.05
LIG1-211ENST00000596457 OR2C3Q8N628 320 aa8.51□□□□□ -1.05
LIG1-211ENST00000596457 IL22RA2Q969J5 263 aa8.51□□□□□ -1.05
LIG1-211ENST00000596457 PINX1Q96BK5 328 aaKnown RBP8.51□□□□□ -1.05
LIG1-211ENST00000596457 CXorf58Q96LI9 332 aa8.51□□□□□ -1.05
LIG1-211ENST00000596457 CCDC32Q9BV29 185 aa8.51□□□□□ -1.05
LIG1-211ENST00000596457 WDR12Q9GZL7 423 aaKnown RBP8.51□□□□□ -1.05
LIG1-211ENST00000596457 TRBV7-1A0A0A6YYK4 115 aa8.5□□□□□ -1.05
LIG1-211ENST00000596457 A0A0B4J2A0 478 aa8.5□□□□□ -1.05
LIG1-211ENST00000596457 CEBPZOSA8MTT3 80 aa8.5□□□□□ -1.05
LIG1-211ENST00000596457 BMPR1BO00238 502 aa8.5□□□□□ -1.05
LIG1-211ENST00000596457 CLEC3BP05452 202 aa8.5□□□□□ -1.05
LIG1-211ENST00000596457 HOXB5P09067 269 aa8.5□□□□□ -1.05
LIG1-211ENST00000596457 SULT1A3P0DMM9 295 aa8.5□□□□□ -1.05
LIG1-211ENST00000596457 SULT1A4P0DMN0 295 aa8.5□□□□□ -1.05
LIG1-211ENST00000596457 ANXA7P20073 488 aaKnown RBP8.5□□□□□ -1.05
LIG1-211ENST00000596457 SRPXP78539 464 aa8.5□□□□□ -1.05
LIG1-211ENST00000596457 C4orf46Q504U0 113 aa8.5□□□□□ -1.05
LIG1-211ENST00000596457 LINC00299Q6ZSB3 139 aa8.5□□□□□ -1.05
LIG1-211ENST00000596457 UBAC2Q8NBM4 344 aa8.5□□□□□ -1.05
LIG1-211ENST00000596457 OR1L6Q8NGR2 347 aa8.5□□□□□ -1.05
LIG1-211ENST00000596457 OR1S1Q8NH92 325 aa8.5□□□□□ -1.05
LIG1-211ENST00000596457 CCDC140Q96MF4 163 aa8.5□□□□□ -1.05
LIG1-211ENST00000596457 OR4C12Q96R67 309 aa8.5□□□□□ -1.05
LIG1-211ENST00000596457 ELOVL1Q9BW60 279 aa8.5□□□□□ -1.05
LIG1-211ENST00000596457 AURKAIP1Q9NWT8 199 aaPredicted RBP8.5□□□□□ -1.05
LIG1-211ENST00000596457 SHPKQ9UHJ6 478 aa8.5□□□□□ -1.05
LIG1-211ENST00000596457 TRAV6A0A075B6T7 132 aa8.49□□□□□ -1.05
LIG1-211ENST00000596457 IGHV3-35A0A0C4DH35 117 aa8.49□□□□□ -1.05
LIG1-211ENST00000596457 OR2T8A6NH00 312 aa8.49□□□□□ -1.05
LIG1-211ENST00000596457 GGCTO75223 188 aaKnown RBP8.49□□□□□ -1.05
LIG1-211ENST00000596457 LY86O95711 162 aa8.49□□□□□ -1.05
LIG1-211ENST00000596457 IGHV3-48P01763 117 aa8.49□□□□□ -1.05
LIG1-211ENST00000596457 OR4E1P0C645 316 aa8.49□□□□□ -1.05
LIG1-211ENST00000596457 GPR183P32249 361 aa8.49□□□□□ -1.05
LIG1-211ENST00000596457 SUB1P53999 127 aaKnown RBP eCLIP8.49□□□□□ -1.05
LIG1-211ENST00000596457 SPCS3P61009 180 aa8.49□□□□□ -1.05
LIG1-211ENST00000596457 KLF5Q13887 457 aaPredicted RBP8.49□□□□□ -1.05
LIG1-211ENST00000596457 SMCO1Q147U7 214 aa8.49□□□□□ -1.05
LIG1-211ENST00000596457 Q56UQ5 140 aa8.49□□□□□ -1.05
LIG1-211ENST00000596457 ACSM6Q6P461 480 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms