RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 CST7O76096 145 aa11.65□□□□□ -0.54
SHKBP1-211ENST00000595945 CNIH1O95406 144 aa11.65□□□□□ -0.54
SHKBP1-211ENST00000595945 METTL15P1P0C7V9 234 aa11.65□□□□□ -0.54
SHKBP1-211ENST00000595945 AREGP15514 252 aa11.65□□□□□ -0.54
SHKBP1-211ENST00000595945 HTR2BP41595 481 aa11.65□□□□□ -0.54
SHKBP1-211ENST00000595945 RPP30P78346 268 aaKnown RBP11.65□□□□□ -0.54
SHKBP1-211ENST00000595945 ERHP84090 104 aaKnown RBP11.65□□□□□ -0.54
SHKBP1-211ENST00000595945 C2orf83Q53S99 150 aa11.65□□□□□ -0.54
SHKBP1-211ENST00000595945 CLEC9AQ6UXN8 241 aa11.65□□□□□ -0.54
SHKBP1-211ENST00000595945 TMEM86BQ8N661 226 aa11.65□□□□□ -0.54
SHKBP1-211ENST00000595945 ZNF114Q8NC26 417 aa11.65□□□□□ -0.54
SHKBP1-211ENST00000595945 SLC24A4Q8NFF2 622 aa11.65□□□□□ -0.54
SHKBP1-211ENST00000595945 FBXL17Q9UF56 701 aa11.65□□□□□ -0.54
SHKBP1-211ENST00000595945 FBXO7Q9Y3I1 522 aa11.65□□□□□ -0.54
SHKBP1-211ENST00000595945 HOXA3O43365 443 aaPredicted RBP11.64□□□□□ -0.55
SHKBP1-211ENST00000595945 SCAF4O95104 1147 aaKnown RBP11.64□□□□□ -0.55
SHKBP1-211ENST00000595945 IFNA10P01566 189 aa11.64□□□□□ -0.55
SHKBP1-211ENST00000595945 OR13C7P0DN81 318 aa11.64□□□□□ -0.55
SHKBP1-211ENST00000595945 C4BPBP20851 252 aa11.64□□□□□ -0.55
SHKBP1-211ENST00000595945 NPY1RP25929 384 aa11.64□□□□□ -0.55
SHKBP1-211ENST00000595945 CRIP2P52943 208 aaPredicted RBP11.64□□□□□ -0.55
SHKBP1-211ENST00000595945 ASPHD1Q5U4P2 390 aa11.64□□□□□ -0.55
SHKBP1-211ENST00000595945 STX12Q86Y82 276 aa11.64□□□□□ -0.55
SHKBP1-211ENST00000595945 MRPL41Q8IXM3 137 aaKnown RBP11.64□□□□□ -0.55
SHKBP1-211ENST00000595945 P2RX4Q99571 388 aa11.64□□□□□ -0.55
SHKBP1-211ENST00000595945 ARPC5LQ9BPX5 153 aa11.64□□□□□ -0.55
SHKBP1-211ENST00000595945 WFDC1Q9HC57 220 aa11.64□□□□□ -0.55
SHKBP1-211ENST00000595945 ZC4H2Q9NQZ6 224 aa11.64□□□□□ -0.55
SHKBP1-211ENST00000595945 KANTRA0A1W2PQU2 76 aa11.63□□□□□ -0.55
SHKBP1-211ENST00000595945 BTBD17A6NE02 478 aa11.63□□□□□ -0.55
SHKBP1-211ENST00000595945 SH2D7A6NKC9 451 aaPredicted RBP11.63□□□□□ -0.55
SHKBP1-211ENST00000595945 TAAR5O14804 337 aa11.63□□□□□ -0.55
SHKBP1-211ENST00000595945 FAM103A1Q9BTL3 118 aaKnown RBP11.63□□□□□ -0.55
SHKBP1-211ENST00000595945 CDC42EP3Q9UKI2 254 aa11.63□□□□□ -0.55
SHKBP1-211ENST00000595945 NF1P21359 2839 aa11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 LINC01548A6NM66 108 aa11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 NPIPB5A8MRT5 1133 aa11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 IGHG2P01859 326 aa11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 CRYGCP07315 174 aa11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 OR8U8P0C7N1 319 aa11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 CTRB1P17538 263 aa11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 SNCAP37840 140 aa11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 MFAP2P55001 183 aa11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 RAB11AP62491 216 aa11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 SCGB2A2Q13296 93 aa11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 CTRB2Q6GPI1 263 aa11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 ETV3LQ6ZN32 361 aa11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 TTC9CQ8N5M4 171 aa11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 OR1S2Q8NGQ3 325 aa11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 OR5C1Q8NGR4 320 aa11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 OR1P1Q8NH06 330 aa11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 SGMS2Q8NHU3 365 aa11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 SMIM3Q9BZL3 60 aa11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 GSX1Q9H4S2 264 aaPredicted RBP11.62□□□□□ -0.55
SHKBP1-211ENST00000595945 ATP6V0E1O15342 81 aa11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 REG1AP05451 166 aa11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 SUB1P53999 127 aaKnown RBP eCLIP11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 BLCAPP62952 87 aa11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 HBG1P69891 147 aa11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 HBG2P69892 147 aa11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 SLC38A11Q08AI6 406 aa11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 ATP6V1FQ16864 119 aa11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 KLK9Q2XQG4 91 aa11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 C19orf54Q5BKX5 351 aa11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 OR8G2PQ6IF36 304 aa11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 SLC51BQ86UW2 128 aa11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 TMEM217Q8N7C4 229 aa11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 OR10P1Q8NGE3 313 aa11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 STOML3Q8TAV4 291 aa11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 ABHD5Q8WTS1 349 aa11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 GON7Q9BXV9 100 aa11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 ZNF580Q9UK33 172 aa11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 KLK9Q9UKQ9 250 aa11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 PAIP2BQ9ULR5 123 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 F11RQ9Y624 299 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-211ENST00000595945 TEP1Q99973 2627 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-211ENST00000595945 FBXO24O75426 580 aa11.6□□□□□ -0.55
SHKBP1-211ENST00000595945 IGF1P05019 195 aa11.6□□□□□ -0.55
SHKBP1-211ENST00000595945 APELAP0DMC3 54 aa11.6□□□□□ -0.55
SHKBP1-211ENST00000595945 SRD5A1P18405 259 aa11.6□□□□□ -0.55
SHKBP1-211ENST00000595945 DLK1P80370 383 aa11.6□□□□□ -0.55
SHKBP1-211ENST00000595945 IFITM2Q01629 132 aa11.6□□□□□ -0.55
SHKBP1-211ENST00000595945 CLINT1Q14677 625 aa11.6□□□□□ -0.55
SHKBP1-211ENST00000595945 VWC2Q2TAL6 325 aa11.6□□□□□ -0.55
SHKBP1-211ENST00000595945 RPL7L1Q6DKI1 246 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-211ENST00000595945 C19orf35Q6ZS72 473 aa11.6□□□□□ -0.55
SHKBP1-211ENST00000595945 LFNGQ8NES3 379 aa11.6□□□□□ -0.55
SHKBP1-211ENST00000595945 PINX1Q96BK5 328 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-211ENST00000595945 TMEM68Q96MH6 324 aa11.6□□□□□ -0.55
SHKBP1-211ENST00000595945 ATP5SQ99766 215 aa11.6□□□□□ -0.55
SHKBP1-211ENST00000595945 GGACTQ9BVM4 153 aa11.6□□□□□ -0.55
SHKBP1-211ENST00000595945 ARV1Q9H2C2 271 aa11.6□□□□□ -0.55
SHKBP1-211ENST00000595945 PARP11Q9NR21 331 aa11.6□□□□□ -0.55
SHKBP1-211ENST00000595945 DMRT1Q9Y5R6 373 aa11.6□□□□□ -0.55
SHKBP1-211ENST00000595945 DNAJC9-AS1A6NH13 148 aa11.59□□□□□ -0.55
SHKBP1-211ENST00000595945 CLDN34H7C241 214 aa11.59□□□□□ -0.55
SHKBP1-211ENST00000595945 DFFBO76075 338 aa11.59□□□□□ -0.55
SHKBP1-211ENST00000595945 IFNA4P05014 189 aa11.59□□□□□ -0.55
SHKBP1-211ENST00000595945 UBA52P62987 128 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-211ENST00000595945 AKIRIN2Q53H80 203 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms