RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 CYB5BO43169 146 aa11.1□□□□□ -0.63
LIG1-208ENST00000595758 HLA-AP01891 365 aaKnown RBP11.1□□□□□ -0.63
LIG1-208ENST00000595758 OR4E1P0C645 316 aa11.1□□□□□ -0.63
LIG1-208ENST00000595758 ZNF616Q08AN1 781 aa11.1□□□□□ -0.63
LIG1-208ENST00000595758 KLK9Q2XQG4 91 aa11.1□□□□□ -0.63
LIG1-208ENST00000595758 C15orf32Q32M92 178 aa11.1□□□□□ -0.63
LIG1-208ENST00000595758 C4orf46Q504U0 113 aa11.1□□□□□ -0.63
LIG1-208ENST00000595758 SPINK9Q5DT21 86 aa11.1□□□□□ -0.63
LIG1-208ENST00000595758 LRTM2Q8N967 370 aa11.1□□□□□ -0.63
LIG1-208ENST00000595758 KLK9Q9UKQ9 250 aa11.1□□□□□ -0.63
LIG1-208ENST00000595758 IGLV11-55A0A075B6I3 123 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 TRAV6A0A075B6T7 132 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 DUXBA0A1W2PPF3 345 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 ANKRD34BA5PLL1 514 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 NDUFB8O95169 186 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 HSPB1P04792 205 aaKnown RBP11.09□□□□□ -0.63
LIG1-208ENST00000595758 OR8U8P0C7N1 319 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 SULT1A3P0DMM9 295 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 SULT1A4P0DMN0 295 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 SPCS3P61009 180 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 ERHP84090 104 aaKnown RBP11.09□□□□□ -0.63
LIG1-208ENST00000595758 DHRS2Q13268 280 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 FHL3Q13643 280 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 AARDQ4LEZ3 155 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 NMSQ5H8A3 153 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 SLC25A24Q6NUK1 477 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 ZNF343Q6P1L6 599 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 LYG2Q86SG7 212 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 OR2C3Q8N628 320 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 OR52E5Q8NH55 327 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 NUDT15Q9NV35 164 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 F11RQ9Y624 299 aaKnown RBP11.09□□□□□ -0.63
LIG1-208ENST00000595758 CMYA5Q8N3K9 4069 aa11.09□□□□□ -0.63
LIG1-208ENST00000595758 IGHV4OR15-8A0A075B7B6 117 aa11.08□□□□□ -0.64
LIG1-208ENST00000595758 A0A087WW49 117 aa11.08□□□□□ -0.64
LIG1-208ENST00000595758 A0A1B0GU03 582 aa11.08□□□□□ -0.64
LIG1-208ENST00000595758 LINC01619G3V211 115 aa11.08□□□□□ -0.64
LIG1-208ENST00000595758 H2AFB2P0C5Z0 115 aa11.08□□□□□ -0.64
LIG1-208ENST00000595758 HOXA1P49639 335 aaPredicted RBP11.08□□□□□ -0.64
LIG1-208ENST00000595758 EXOSC2Q13868 293 aaKnown RBP11.08□□□□□ -0.64
LIG1-208ENST00000595758 SMCO1Q147U7 214 aa11.08□□□□□ -0.64
LIG1-208ENST00000595758 OR1L6Q8NGR2 347 aa11.08□□□□□ -0.64
LIG1-208ENST00000595758 COQ8AQ8NI60 647 aa11.08□□□□□ -0.64
LIG1-208ENST00000595758 ENKURQ8TC29 256 aa11.08□□□□□ -0.64
LIG1-208ENST00000595758 RANGRFQ9HD47 186 aaPredicted RBP11.08□□□□□ -0.64
LIG1-208ENST00000595758 ENY2Q9NPA8 101 aa11.08□□□□□ -0.64
LIG1-208ENST00000595758 THYN1Q9P016 225 aa11.08□□□□□ -0.64
LIG1-208ENST00000595758 PEF1Q9UBV8 284 aaKnown RBP11.08□□□□□ -0.64
LIG1-208ENST00000595758 CACFD1Q9UGQ2 172 aa11.08□□□□□ -0.64
LIG1-208ENST00000595758 DMRT1Q9Y5R6 373 aa11.08□□□□□ -0.64
LIG1-208ENST00000595758 FBN3Q75N90 2809 aa11.08□□□□□ -0.64
LIG1-208ENST00000595758 INS-IGF2F8WCM5 200 aa11.07□□□□□ -0.64
LIG1-208ENST00000595758 DUS4LO95620 317 aaKnown RBP11.07□□□□□ -0.64
LIG1-208ENST00000595758 HOXB5P09067 269 aa11.07□□□□□ -0.64
LIG1-208ENST00000595758 SNCAP37840 140 aa11.07□□□□□ -0.64
LIG1-208ENST00000595758 MFAP2P55001 183 aa11.07□□□□□ -0.64
LIG1-208ENST00000595758 DEFA1P59665 94 aa11.07□□□□□ -0.64
LIG1-208ENST00000595758 DEFA3P59666 94 aa11.07□□□□□ -0.64
LIG1-208ENST00000595758 OR1P1Q8NH06 330 aa11.07□□□□□ -0.64
LIG1-208ENST00000595758 EEF1AKMT3Q96AZ1 226 aa11.07□□□□□ -0.64
LIG1-208ENST00000595758 TMED3Q9Y3Q3 217 aa11.07□□□□□ -0.64
LIG1-208ENST00000595758 NOTCH1P46531 2555 aa11.06□□□□□ -0.64
LIG1-208ENST00000595758 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.06□□□□□ -0.64
LIG1-208ENST00000595758 TRBV12-3P01733 135 aa11.06□□□□□ -0.64
LIG1-208ENST00000595758 IGLL1P15814 213 aa11.06□□□□□ -0.64
LIG1-208ENST00000595758 ZP3P21754 424 aa11.06□□□□□ -0.64
LIG1-208ENST00000595758 SLURP1P55000 103 aa11.06□□□□□ -0.64
LIG1-208ENST00000595758 PDLIM3Q53GG5 364 aaPredicted RBP11.06□□□□□ -0.64
LIG1-208ENST00000595758 FAM209BQ5JX69 171 aa11.06□□□□□ -0.64
LIG1-208ENST00000595758 ZNF114Q8NC26 417 aa11.06□□□□□ -0.64
LIG1-208ENST00000595758 OR1S1Q8NH92 325 aa11.06□□□□□ -0.64
LIG1-208ENST00000595758 RCC1LQ96I51 464 aaKnown RBP11.06□□□□□ -0.64
LIG1-208ENST00000595758 CXorf58Q96LI9 332 aa11.06□□□□□ -0.64
LIG1-208ENST00000595758 S4R3C0 116 aa11.06□□□□□ -0.64
LIG1-208ENST00000595758 MFSD2BA6NFX1 497 aa11.05□□□□□ -0.64
LIG1-208ENST00000595758 CEBPZOSA8MTT3 80 aa11.05□□□□□ -0.64
LIG1-208ENST00000595758 NXPH3O95157 252 aa11.05□□□□□ -0.64
LIG1-208ENST00000595758 IGHV3-23P01764 117 aa11.05□□□□□ -0.64
LIG1-208ENST00000595758 SLC25A6P12236 298 aa11.05□□□□□ -0.64
LIG1-208ENST00000595758 HOXD3P31249 432 aaPredicted RBP11.05□□□□□ -0.64
LIG1-208ENST00000595758 SUB1P53999 127 aaKnown RBP eCLIP11.05□□□□□ -0.64
LIG1-208ENST00000595758 GGNBP1Q5YKI7 109 aa11.05□□□□□ -0.64
LIG1-208ENST00000595758 NRARPQ7Z6K4 114 aa11.05□□□□□ -0.64
LIG1-208ENST00000595758 OR52B4Q8NGK2 314 aa11.05□□□□□ -0.64
LIG1-208ENST00000595758 VN1R17PQ8TDU5 208 aa11.05□□□□□ -0.64
LIG1-208ENST00000595758 MITD1Q8WV92 249 aa11.05□□□□□ -0.64
LIG1-208ENST00000595758 DCUN1D4Q92564 292 aa11.05□□□□□ -0.64
LIG1-208ENST00000595758 MCRIP2Q9BUT9 160 aaKnown RBP11.05□□□□□ -0.64
LIG1-208ENST00000595758 HEYLQ9NQ87 328 aaPredicted RBP11.05□□□□□ -0.64
LIG1-208ENST00000595758 TRBV7-1A0A0A6YYK4 115 aa11.04□□□□□ -0.64
LIG1-208ENST00000595758 PITX3O75364 302 aa11.04□□□□□ -0.64
LIG1-208ENST00000595758 ADAP1O75689 374 aa11.04□□□□□ -0.64
LIG1-208ENST00000595758 IFNA21P01568 189 aa11.04□□□□□ -0.64
LIG1-208ENST00000595758 TNFRSF9Q07011 255 aa11.04□□□□□ -0.64
LIG1-208ENST00000595758 OXLD1Q5BKU9 147 aa11.04□□□□□ -0.64
LIG1-208ENST00000595758 CLEC19AQ6UXS0 136 aa11.04□□□□□ -0.64
LIG1-208ENST00000595758 DUSP18Q8NEJ0 188 aa11.04□□□□□ -0.64
LIG1-208ENST00000595758 DLX4Q92988 240 aaPredicted RBP11.04□□□□□ -0.64
LIG1-208ENST00000595758 MISP3Q96FF7 219 aa11.04□□□□□ -0.64
LIG1-208ENST00000595758 CCDC140Q96MF4 163 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms