RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 THEM6Q8WUY1 208 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 FAM3DQ96BQ1 224 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 RPUSD4Q96CM3 377 aaKnown RBP3.42□□□□□ -1.86
SMAD4-216ENST00000593223 PLEKHB2Q96CS7 222 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 ZNF382Q96SR6 550 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 RNF126Q9BV68 326 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 CHST6Q9GZX3 395 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 PBOV1Q9GZY1 135 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 RNASE7Q9H1E1 156 aaKnown RBP3.42□□□□□ -1.86
SMAD4-216ENST00000593223 NOX3Q9HBY0 568 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 GPR84Q9NQS5 396 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 TMEM100Q9NV29 134 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 UQCC1Q9NVA1 299 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 ANAPC11Q9NYG5 84 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 ZNF226Q9NYT6 803 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 MTFP1Q9UDX5 166 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 ZNF629Q9UEG4 869 aaPredicted RBP3.42□□□□□ -1.86
SMAD4-216ENST00000593223 BTRCQ9Y297 605 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 PKIGQ9Y2B9 76 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 RFNGQ9Y644 331 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 LRRK1Q38SD2 2015 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 VWA8A3KMH1 1905 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 MAP1AP78559 2803 aaPredicted RBP3.41□□□□□ -1.86
SMAD4-216ENST00000593223 MYLKQ15746 1914 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 TRAV36DV7A0A075B6V5 113 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 A0A0G2JRQ6 117 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 FAM236DA0A1B0GTK5 79 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 PGPA6NDG6 321 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 SERF1AO75920 110 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 IGHMP01871 453 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 CRYBA1P05813 215 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 FAM236CP0DP71 79 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 FMO3P31513 532 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 PRSS3P35030 304 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 APLNRP35414 380 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 RPS23P62266 143 aaKnown RBP3.41□□□□□ -1.86
SMAD4-216ENST00000593223 SELENOTP62341 195 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 RAP1AP62834 184 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 CACNG7P62955 275 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 FABP5Q01469 135 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 TMEM267Q0VDI3 215 aaPredicted RBP3.41□□□□□ -1.86
SMAD4-216ENST00000593223 OR8B8Q15620 311 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 LTC4SQ16873 150 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 MORN2Q502X0 79 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 TEX43Q6ZNM6 134 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 STRADAQ7RTN6 431 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 TMEM179BQ7Z7N9 219 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 ZNF589Q86UQ0 364 aaPredicted RBP3.41□□□□□ -1.86
SMAD4-216ENST00000593223 PDZD9Q8IXQ8 264 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 C6orf223Q8N319 242 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 OR1L1Q8NH94 360 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 LINC01006Q8NI28 216 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 LRRC29Q8WV35 223 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 OR5P3Q8WZ94 311 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 GPR146Q96CH1 333 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 REEP6Q96HR9 211 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 GNB1LQ9BYB4 327 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 SLC25A31Q9H0C2 315 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 WASHC3Q9Y3C0 194 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 U3KQ87 197 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 ZFC3H1O60293 1989 aaKnown RBP3.41□□□□□ -1.86
SMAD4-216ENST00000593223 MXRA5Q9NR99 2828 aa3.41□□□□□ -1.86
SMAD4-216ENST00000593223 DCHS2Q6V1P9 2916 aa3.4□□□□□ -1.86
SMAD4-216ENST00000593223 MEIKINA0A087WXM9 373 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 TRAV26-2A0A0B4J265 109 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 A0A0X1KG70 313 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 C8orf87E5RJ46 101 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 PSPHP1O15172 72 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 SPAG7O75391 227 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 CA2P00918 260 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 FGF6P10767 208 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 EVI2AP22794 236 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 S100A11P31949 105 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 DIO3P55073 304 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 HLA-DRB3P79483 266 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 TNFAIP6P98066 277 aaPredicted RBP3.4□□□□□ -1.87
SMAD4-216ENST00000593223 PSG9Q00887 426 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 IL15RAQ13261 267 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 Q499Y3 187 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 SCGB2B2Q4G0G5 96 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 C2orf83Q53S99 150 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 CENPWQ5EE01 88 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 ZNF620Q6ZNG0 422 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 C14orf178Q8N769 122 aaPredicted RBP3.4□□□□□ -1.87
SMAD4-216ENST00000593223 GDPD1Q8N9F7 314 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 C11orf72Q8NBR9 251 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 TSTD1Q8NFU3 115 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 OR10AD1Q8NGE0 317 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 CCL17Q92583 94 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 STARD4Q96DR4 205 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 RNF185Q96GF1 192 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 LYSMD1Q96S90 227 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 PRSS27Q9BQR3 290 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 C19orf24Q9BVV8 132 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 C20orf27Q9GZN8 174 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 EIF5A2Q9GZV4 153 aaKnown RBP3.4□□□□□ -1.87
SMAD4-216ENST00000593223 CDC42EP4Q9H3Q1 356 aaKnown RBP3.4□□□□□ -1.87
SMAD4-216ENST00000593223 TMEM216Q9P0N5 145 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 LAMTOR3Q9UHA4 124 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 SIGLEC7Q9Y286 467 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms