RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 SCARB1Q8WTV0 552 aa9.91□□□□□ -0.82
APOC1-209ENST00000592885 HINT2Q9BX68 163 aa9.91□□□□□ -0.82
APOC1-209ENST00000592885 TP53TG1Q9Y2A0 90 aa9.91□□□□□ -0.82
APOC1-209ENST00000592885 OR4C46A6NHA9 309 aa9.9□□□□□ -0.82
APOC1-209ENST00000592885 C15orf62A8K5M9 175 aa9.9□□□□□ -0.82
APOC1-209ENST00000592885 F8W735 103 aaPredicted RBP9.9□□□□□ -0.82
APOC1-209ENST00000592885 K7EIM0 57 aa9.9□□□□□ -0.82
APOC1-209ENST00000592885 HLA-DMAP28067 261 aa9.9□□□□□ -0.82
APOC1-209ENST00000592885 FCGR2BP31994 310 aaPredicted RBP9.9□□□□□ -0.82
APOC1-209ENST00000592885 MFAP2P55001 183 aa9.9□□□□□ -0.82
APOC1-209ENST00000592885 UCP3P55916 312 aa9.9□□□□□ -0.82
APOC1-209ENST00000592885 TSPAN5P62079 268 aa9.9□□□□□ -0.82
APOC1-209ENST00000592885 RELQ04864 619 aaPredicted RBP9.9□□□□□ -0.82
APOC1-209ENST00000592885 WFDC3Q8IUB2 231 aa9.9□□□□□ -0.82
APOC1-209ENST00000592885 OVOL2Q9BRP0 275 aa9.9□□□□□ -0.82
APOC1-209ENST00000592885 NSG2Q9Y328 171 aa9.9□□□□□ -0.82
APOC1-209ENST00000592885 DNAH1Q9P2D7 4330 aa9.9□□□□□ -0.83
APOC1-209ENST00000592885 IGHV3-35A0A0C4DH35 117 aa9.89□□□□□ -0.83
APOC1-209ENST00000592885 KIR2DL5BA0A0G2JN68 375 aa9.89□□□□□ -0.83
APOC1-209ENST00000592885 KIR2DL5BA0A0G2JPC4 375 aa9.89□□□□□ -0.83
APOC1-209ENST00000592885 UBE2CO00762 179 aa9.89□□□□□ -0.83
APOC1-209ENST00000592885 PHLDA2Q53GA4 152 aa9.89□□□□□ -0.83
APOC1-209ENST00000592885 Q56UQ5 140 aa9.89□□□□□ -0.83
APOC1-209ENST00000592885 Q6ZWC4 215 aa9.89□□□□□ -0.83
APOC1-209ENST00000592885 TBC1D26Q86UD7 250 aa9.89□□□□□ -0.83
APOC1-209ENST00000592885 KIR2DL5AQ8N109 375 aa9.89□□□□□ -0.83
APOC1-209ENST00000592885 KIR2DL5BQ8NHK3 375 aa9.89□□□□□ -0.83
APOC1-209ENST00000592885 SEC22AQ96IW7 307 aa9.89□□□□□ -0.83
APOC1-209ENST00000592885 TXN2Q99757 166 aa9.89□□□□□ -0.83
APOC1-209ENST00000592885 CHRDL1Q9BU40 450 aa9.89□□□□□ -0.83
APOC1-209ENST00000592885 COMMD3Q9UBI1 195 aa9.89□□□□□ -0.83
APOC1-209ENST00000592885 SELENOKQ9Y6D0 94 aa9.89□□□□□ -0.83
APOC1-209ENST00000592885 ADMP35318 185 aa9.88□□□□□ -0.83
APOC1-209ENST00000592885 RND3P61587 244 aa9.88□□□□□ -0.83
APOC1-209ENST00000592885 PRCDQ00LT1 54 aa9.88□□□□□ -0.83
APOC1-209ENST00000592885 H2BFWTQ7Z2G1 175 aa9.88□□□□□ -0.83
APOC1-209ENST00000592885 UBAC2Q8NBM4 344 aa9.88□□□□□ -0.83
APOC1-209ENST00000592885 OR4A16Q8NH70 328 aa9.88□□□□□ -0.83
APOC1-209ENST00000592885 ZNF486Q96H40 463 aaPredicted RBP9.88□□□□□ -0.83
APOC1-209ENST00000592885 FUNDC2Q9BWH2 189 aa9.88□□□□□ -0.83
APOC1-209ENST00000592885 DBX1A6NMT0 343 aa9.87□□□□□ -0.83
APOC1-209ENST00000592885 NUPL2O15504 423 aaKnown RBP9.87□□□□□ -0.83
APOC1-209ENST00000592885 CTSGP08311 255 aa9.87□□□□□ -0.83
APOC1-209ENST00000592885 ATF4P18848 351 aaPredicted RBP9.87□□□□□ -0.83
APOC1-209ENST00000592885 TBPP20226 339 aa9.87□□□□□ -0.83
APOC1-209ENST00000592885 BMI1P35226 326 aa9.87□□□□□ -0.83
APOC1-209ENST00000592885 MFAP4P55083 255 aa9.87□□□□□ -0.83
APOC1-209ENST00000592885 NCS1P62166 190 aa9.87□□□□□ -0.83
APOC1-209ENST00000592885 ODF3L2Q3SX64 289 aa9.87□□□□□ -0.83
APOC1-209ENST00000592885 SNX29P2Q8IUI4 249 aa9.87□□□□□ -0.83
APOC1-209ENST00000592885 AP3S1Q92572 193 aa9.87□□□□□ -0.83
APOC1-209ENST00000592885 OR10C1Q96KK4 312 aa9.87□□□□□ -0.83
APOC1-209ENST00000592885 C20orf24Q9BUV8 137 aa9.87□□□□□ -0.83
APOC1-209ENST00000592885 IGHV3-21A0A0B4J1V1 117 aa9.86□□□□□ -0.83
APOC1-209ENST00000592885 I3L2K1 104 aa9.86□□□□□ -0.83
APOC1-209ENST00000592885 SPRY2O43597 315 aa9.86□□□□□ -0.83
APOC1-209ENST00000592885 ATG12O94817 140 aa9.86□□□□□ -0.83
APOC1-209ENST00000592885 IGKV1-39P01597 117 aa9.86□□□□□ -0.83
APOC1-209ENST00000592885 IGKV1D-39P04432 117 aa9.86□□□□□ -0.83
APOC1-209ENST00000592885 CD5P06127 495 aa9.86□□□□□ -0.83
APOC1-209ENST00000592885 ELK1P19419 428 aa9.86□□□□□ -0.83
APOC1-209ENST00000592885 RORCP51449 518 aa9.86□□□□□ -0.83
APOC1-209ENST00000592885 CMC4P56277 68 aaPredicted RBP9.86□□□□□ -0.83
APOC1-209ENST00000592885 HSPE1P61604 102 aaKnown RBP9.86□□□□□ -0.83
APOC1-209ENST00000592885 VBP1P61758 197 aa9.86□□□□□ -0.83
APOC1-209ENST00000592885 TNFRSF9Q07011 255 aa9.86□□□□□ -0.83
APOC1-209ENST00000592885 MZT2AQ6P582 158 aa9.86□□□□□ -0.83
APOC1-209ENST00000592885 ARRDC1Q8N5I2 433 aa9.86□□□□□ -0.83
APOC1-209ENST00000592885 MRGPRFQ96AM1 343 aa9.86□□□□□ -0.83
APOC1-209ENST00000592885 MISP3Q96FF7 219 aa9.86□□□□□ -0.83
APOC1-209ENST00000592885 GALNT14Q96FL9 552 aa9.86□□□□□ -0.83
APOC1-209ENST00000592885 C6orf62Q9GZU0 229 aaPredicted RBP9.86□□□□□ -0.83
APOC1-209ENST00000592885 SMPXQ9UHP9 88 aa9.86□□□□□ -0.83
APOC1-209ENST00000592885 IGHV7-4-1A0A0J9YVY3 117 aa9.85□□□□□ -0.83
APOC1-209ENST00000592885 INS-IGF2F8WCM5 200 aa9.85□□□□□ -0.83
APOC1-209ENST00000592885 HPGDSO60760 199 aa9.85□□□□□ -0.83
APOC1-209ENST00000592885 CTSDP07339 412 aaPredicted RBP9.85□□□□□ -0.83
APOC1-209ENST00000592885 ERHP84090 104 aaKnown RBP9.85□□□□□ -0.83
APOC1-209ENST00000592885 RNASE10Q5GAN6 216 aaKnown RBP9.85□□□□□ -0.83
APOC1-209ENST00000592885 STPG3Q8N7X2 389 aa9.85□□□□□ -0.83
APOC1-209ENST00000592885 C15orf40Q8WUR7 153 aa9.85□□□□□ -0.83
APOC1-209ENST00000592885 GINS3Q9BRX5 216 aa9.85□□□□□ -0.83
APOC1-209ENST00000592885 NXF2Q9GZY0 626 aaKnown RBP9.85□□□□□ -0.83
APOC1-209ENST00000592885 UBQLN2Q9UHD9 624 aa9.85□□□□□ -0.83
APOC1-209ENST00000592885 NUPR2A6NF83 97 aa9.84□□□□□ -0.83
APOC1-209ENST00000592885 CORTO00230 105 aa9.84□□□□□ -0.83
APOC1-209ENST00000592885 CHEK1O14757 476 aa9.84□□□□□ -0.83
APOC1-209ENST00000592885 GNG7O60262 68 aa9.84□□□□□ -0.83
APOC1-209ENST00000592885 GABARAPO95166 117 aa9.84□□□□□ -0.83
APOC1-209ENST00000592885 MT-CO2P00403 227 aa9.84□□□□□ -0.83
APOC1-209ENST00000592885 DEFB135Q30KP9 77 aa9.84□□□□□ -0.83
APOC1-209ENST00000592885 LHFPL1Q86WI0 220 aa9.84□□□□□ -0.83
APOC1-209ENST00000592885 TMEM217Q8N7C4 229 aa9.84□□□□□ -0.83
APOC1-209ENST00000592885 TMEM116Q8NCL8 245 aa9.84□□□□□ -0.83
APOC1-209ENST00000592885 RNF183Q96D59 192 aa9.84□□□□□ -0.83
APOC1-209ENST00000592885 ZNF414Q96IQ9 312 aa9.84□□□□□ -0.83
APOC1-209ENST00000592885 RHPN1-AS1Q9BWJ2 59 aa9.84□□□□□ -0.83
APOC1-209ENST00000592885 FAM25AB3EWG3 89 aa9.83□□□□□ -0.84
APOC1-209ENST00000592885 FAM25CB3EWG5 89 aa9.83□□□□□ -0.84
APOC1-209ENST00000592885 FAM25GB3EWG6 89 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms