RNA–Protein interactions for RNA: ENST00000591598.5

CTDP1-207, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best)

Gene CTDP1, Length 3,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-207ENST00000591598 RAB9BQ9NP90 201 aa13.69□□□□□ -0.22
CTDP1-207ENST00000591598 FOXA2Q9Y261 457 aaPredicted RBP13.69□□□□□ -0.22
CTDP1-207ENST00000591598 TRAPPC1Q9Y5R8 145 aa13.69□□□□□ -0.22
CTDP1-207ENST00000591598 WNK2Q9Y3S1 2297 aa13.69□□□□□ -0.22
CTDP1-207ENST00000591598 NKX6-3A6NJ46 265 aa13.69□□□□□ -0.22
CTDP1-207ENST00000591598 FAM90A9PA6NNJ1 464 aa13.69□□□□□ -0.22
CTDP1-207ENST00000591598 TGOLN2O43493 480 aa13.69□□□□□ -0.22
CTDP1-207ENST00000591598 GATA4P43694 442 aa13.69□□□□□ -0.22
CTDP1-207ENST00000591598 NUBP1P53384 320 aa13.69□□□□□ -0.22
CTDP1-207ENST00000591598 LYPD2Q6UXB3 125 aa13.69□□□□□ -0.22
CTDP1-207ENST00000591598 TMEM183AQ8IXX5 376 aa13.69□□□□□ -0.22
CTDP1-207ENST00000591598 COMMD5Q9GZQ3 224 aa13.69□□□□□ -0.22
CTDP1-207ENST00000591598 LSM4Q9Y4Z0 139 aaKnown RBP13.69□□□□□ -0.22
CTDP1-207ENST00000591598 DMRT1Q9Y5R6 373 aa13.69□□□□□ -0.22
CTDP1-207ENST00000591598 ZNF729A6NN14 1252 aaPredicted RBP13.68□□□□□ -0.22
CTDP1-207ENST00000591598 VENTXO95231 258 aa13.68□□□□□ -0.22
CTDP1-207ENST00000591598 TNFRSF1AP19438 455 aa13.68□□□□□ -0.22
CTDP1-207ENST00000591598 USF2Q15853 346 aaPredicted RBP13.68□□□□□ -0.22
CTDP1-207ENST00000591598 CACNA1BQ00975 2339 aa13.68□□□□□ -0.22
CTDP1-207ENST00000591598 IGKV1OR2-108A0A075B7D4 117 aa13.68□□□□□ -0.22
CTDP1-207ENST00000591598 REG1AP05451 166 aa13.68□□□□□ -0.22
CTDP1-207ENST00000591598 CEACAM8P31997 349 aaPredicted RBP13.68□□□□□ -0.22
CTDP1-207ENST00000591598 SLC35B1P78383 322 aa13.68□□□□□ -0.22
CTDP1-207ENST00000591598 HLA-DRB5Q30154 266 aa13.68□□□□□ -0.22
CTDP1-207ENST00000591598 LHFPL4Q7Z7J7 247 aa13.68□□□□□ -0.22
CTDP1-207ENST00000591598 MRPL41Q8IXM3 137 aaKnown RBP13.68□□□□□ -0.22
CTDP1-207ENST00000591598 ZNF439Q8NDP4 499 aa13.68□□□□□ -0.22
CTDP1-207ENST00000591598 IMMP2LQ96T52 175 aa13.68□□□□□ -0.22
CTDP1-207ENST00000591598 NABP2Q9BQ15 211 aa13.68□□□□□ -0.22
CTDP1-207ENST00000591598 TEX50A0A1B0GTY4 177 aa13.68□□□□□ -0.22
CTDP1-207ENST00000591598 GRIFINA4D1Z8 144 aa13.68□□□□□ -0.22
CTDP1-207ENST00000591598 C17orf100A8MU93 164 aa13.68□□□□□ -0.22
CTDP1-207ENST00000591598 ENSAO43768 121 aaKnown RBP13.68□□□□□ -0.22
CTDP1-207ENST00000591598 TCF15Q12870 199 aa13.68□□□□□ -0.22
CTDP1-207ENST00000591598 OR2T6Q8NHC8 308 aa13.68□□□□□ -0.22
CTDP1-207ENST00000591598 FAM222BQ8WU58 562 aa13.68□□□□□ -0.22
CTDP1-207ENST00000591598 RAB1CQ92928 201 aa13.68□□□□□ -0.22
CTDP1-207ENST00000591598 PRNDQ9UKY0 176 aa13.68□□□□□ -0.22
CTDP1-207ENST00000591598 TRGV8A0A0C4DH27 118 aa13.67□□□□□ -0.22
CTDP1-207ENST00000591598 E7EUB6 86 aa13.67□□□□□ -0.22
CTDP1-207ENST00000591598 AARDQ4LEZ3 155 aa13.67□□□□□ -0.22
CTDP1-207ENST00000591598 ADTRPQ96IZ2 230 aa13.67□□□□□ -0.22
CTDP1-207ENST00000591598 PRDM13Q9H4Q3 707 aa13.67□□□□□ -0.22
CTDP1-207ENST00000591598 DYNLRB1Q9NP97 96 aa13.67□□□□□ -0.22
CTDP1-207ENST00000591598 UPK2O00526 184 aa13.67□□□□□ -0.22
CTDP1-207ENST00000591598 HIST1H1BP16401 226 aaKnown RBP13.67□□□□□ -0.22
CTDP1-207ENST00000591598 CRYBB3P26998 211 aa13.67□□□□□ -0.22
CTDP1-207ENST00000591598 ZNF90Q03938 601 aa13.67□□□□□ -0.22
CTDP1-207ENST00000591598 SLC25A48Q6ZT89 311 aaKnown RBP13.67□□□□□ -0.22
CTDP1-207ENST00000591598 ZNF714Q96N38 554 aa13.67□□□□□ -0.22
CTDP1-207ENST00000591598 PYGO2Q9BRQ0 406 aa13.67□□□□□ -0.22
CTDP1-207ENST00000591598 DVL1O14640 695 aa13.66□□□□□ -0.22
CTDP1-207ENST00000591598 ZZEF1O43149 2961 aa13.66□□□□□ -0.22
CTDP1-207ENST00000591598 GPX4P36969 197 aaPredicted RBP13.66□□□□□ -0.22
CTDP1-207ENST00000591598 ASH1LQ9NR48 2969 aaKnown RBP13.66□□□□□ -0.22
CTDP1-207ENST00000591598 APOA2P02652 100 aa13.66□□□□□ -0.22
CTDP1-207ENST00000591598 CBLN1P23435 193 aa13.66□□□□□ -0.22
CTDP1-207ENST00000591598 TMEM200BQ69YZ2 307 aa13.66□□□□□ -0.22
CTDP1-207ENST00000591598 OR10G8Q8NGN5 311 aa13.66□□□□□ -0.22
CTDP1-207ENST00000591598 PLAUP00749 431 aa13.66□□□□□ -0.22
CTDP1-207ENST00000591598 ERVFC1-1P60608 527 aa13.66□□□□□ -0.22
CTDP1-207ENST00000591598 DMRTC2Q8IXT2 367 aaPredicted RBP13.66□□□□□ -0.22
CTDP1-207ENST00000591598 NHLRC2Q8NBF2 726 aa13.66□□□□□ -0.22
CTDP1-207ENST00000591598 SPTBN4Q9H254 2564 aa13.65□□□□□ -0.22
CTDP1-207ENST00000591598 PPIAL4EA0A075B759 164 aa13.65□□□□□ -0.22
CTDP1-207ENST00000591598 IGHV3-21A0A0B4J1V1 117 aa13.65□□□□□ -0.22
CTDP1-207ENST00000591598 PPIAL4DF5H284 164 aa13.65□□□□□ -0.22
CTDP1-207ENST00000591598 GGCTO75223 188 aaKnown RBP13.65□□□□□ -0.22
CTDP1-207ENST00000591598 PPIAL4FP0DN26 164 aa13.65□□□□□ -0.22
CTDP1-207ENST00000591598 SRP14P37108 136 aaKnown RBP13.65□□□□□ -0.22
CTDP1-207ENST00000591598 TMPRSS3P57727 454 aa13.65□□□□□ -0.22
CTDP1-207ENST00000591598 KRTCAP3Q53RY4 240 aa13.65□□□□□ -0.22
CTDP1-207ENST00000591598 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.65□□□□□ -0.22
CTDP1-207ENST00000591598 PPIAL4AQ9Y536 164 aa13.65□□□□□ -0.22
CTDP1-207ENST00000591598 DCHS2Q6V1P9 2916 aa13.65□□□□□ -0.22
CTDP1-207ENST00000591598 TRAV5A0A0B4J249 113 aa13.65□□□□□ -0.22
CTDP1-207ENST00000591598 LYNX1G3V0Z9 82 aa13.65□□□□□ -0.22
CTDP1-207ENST00000591598 FRMD6-AS1P0C7T7 363 aa13.65□□□□□ -0.22
CTDP1-207ENST00000591598 LYNX1P0DP58 116 aa13.65□□□□□ -0.22
CTDP1-207ENST00000591598 TCL1AP56279 114 aa13.65□□□□□ -0.22
CTDP1-207ENST00000591598 SUMO1P63165 101 aaKnown RBP13.65□□□□□ -0.22
CTDP1-207ENST00000591598 PRCDQ00LT1 54 aa13.65□□□□□ -0.22
CTDP1-207ENST00000591598 FXYD3Q14802 87 aa13.65□□□□□ -0.22
CTDP1-207ENST00000591598 GAL3ST2Q9H3Q3 398 aa13.65□□□□□ -0.22
CTDP1-207ENST00000591598 SVEP1Q4LDE5 3571 aa13.64□□□□□ -0.23
CTDP1-207ENST00000591598 FCN3O75636 299 aa13.64□□□□□ -0.23
CTDP1-207ENST00000591598 CD33P20138 364 aa13.64□□□□□ -0.23
CTDP1-207ENST00000591598 TMEM256Q8N2U0 113 aa13.64□□□□□ -0.23
CTDP1-207ENST00000591598 UHRF2Q96PU4 802 aa13.64□□□□□ -0.23
CTDP1-207ENST00000591598 LINC00312Q9Y6C7 94 aa13.64□□□□□ -0.23
CTDP1-207ENST00000591598 K7EN84 100 aa13.64□□□□□ -0.23
CTDP1-207ENST00000591598 MT-CO2P00403 227 aa13.64□□□□□ -0.23
CTDP1-207ENST00000591598 CNN1P51911 297 aaKnown RBP13.64□□□□□ -0.23
CTDP1-207ENST00000591598 SSBP2P81877 361 aaPredicted RBP13.64□□□□□ -0.23
CTDP1-207ENST00000591598 FOXC1Q12948 553 aa13.64□□□□□ -0.23
CTDP1-207ENST00000591598 ACTL10Q5JWF8 245 aa13.64□□□□□ -0.23
CTDP1-207ENST00000591598 TEX38Q6PEX7 206 aa13.64□□□□□ -0.23
CTDP1-207ENST00000591598 FLYWCH2Q96CP2 140 aaKnown RBP13.64□□□□□ -0.23
CTDP1-207ENST00000591598 ARHGAP32A7KAX9 2087 aa13.64□□□□□ -0.23
CTDP1-207ENST00000591598 THBDP07204 575 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms