RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, human

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-222	ENST00000590619	EIF4EBP1	Q13541	118 aa	Predicted RBP	4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619	RRN3P1	Q2M238	152 aa		4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619		Q499Y3	187 aa		4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619	OGFRL1	Q5TC84	451 aa	Predicted RBP	4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619	ZNF773	Q6PK81	442 aa		4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619	KCTD9	Q7L273	389 aa		4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619	AQP12A	Q8IXF9	295 aa		4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619	H1FOO	Q8IZA3	346 aa	Predicted RBP	4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619	FAM89B	Q8N5H3	189 aa		4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619	CIB1	Q99828	191 aa		4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619	CABLES2	Q9BTV7	478 aa		4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619	TMEM59	Q9BXS4	323 aa		4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619	LPAR5	Q9H1C0	372 aa		4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619	KCNK15	Q9H427	330 aa		4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619	AMBN	Q9NP70	447 aa		4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619	C12orf4	Q9NQ89	552 aa		4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619	MRPS7	Q9Y2R9	242 aa	Known RBP	4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619	RBMX2	Q9Y388	322 aa	Known RBP	4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619	MRPS16	Q9Y3D3	137 aa	Known RBP	4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619	F11R	Q9Y624	299 aa	Known RBP	4.38	□□□□□ -1.71
DNMT1-222	ENST00000590619	IGLV5-52	A0A0A0MRZ9	124 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619		A0A1B0GU03	582 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	HELT	A6NFD8	242 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	CBY3	A6NI87	242 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	SAC3D1	A6NKF1	404 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	TMEM14DP	A8MWL7	114 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619		I3L2K1	104 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	LALBA	P00709	142 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	IGKV3-20	P01619	116 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	UBB	P0CG47	229 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	TRAPPC2	P0DI81	140 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	TRAPPC2B	P0DI82	140 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	HOXB6	P17509	224 aa	Known RBP	4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	NPPC	P23582	126 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	DEFB1	P60022	68 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	DHRS2	Q13268	280 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	KIR3DS1	Q14943	382 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	RCN1	Q15293	331 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	TIMM50	Q3ZCQ8	353 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	PLAC9	Q5JTB6	97 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	RBM48	Q5RL73	367 aa	Known RBP	4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	GDF5OS	Q5U4N7	250 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	MEDAG	Q5VYS4	303 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	ZNF709	Q8N972	641 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	ZNF114	Q8NC26	417 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	OR52I1	Q8NGK6	324 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	OR4S2	Q8NH73	311 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	SLC25A46	Q96AG3	418 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	SMIM19	Q96E16	107 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	ARHGAP5-AS1	Q96IT6	56 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	GPHA2	Q96T91	129 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	TXN2	Q99757	166 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	SLC29A1	Q99808	456 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	GINS3	Q9BRX5	216 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	QTRT1	Q9BXR0	403 aa	Known RBP	4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	PECR	Q9BY49	303 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	COMMD5	Q9GZQ3	224 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	ZFAND3	Q9H8U3	227 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	HRASLS	Q9HDD0	168 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	BABAM2	Q9NXR7	383 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619	FSIP2	Q5CZC0	6907 aa		4.37	□□□□□ -1.71
DNMT1-222	ENST00000590619		A0A1W2PS18	150 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	LYRM9	A8MSI8	78 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	DIRAS3	O95661	229 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	C1QB	P02746	253 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	ATP5G1	P05496	136 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	CDK1	P06493	297 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	HLA-DRB4	P13762	266 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	P2RY1	P47900	373 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	ATP5G3	P48201	142 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	HOXA1	P49639	335 aa	Predicted RBP	4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	SSX1	Q16384	188 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	HSP90B2P	Q58FF3	399 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	C1orf100	Q5SVJ3	147 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	RXFP4	Q8TDU9	374 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	TCTEX1D2	Q8WW35	142 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	MAFIP	Q8WZ33	124 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	FCGR1B	Q92637	280 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	CCDC124	Q96CT7	223 aa	Known RBP	4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	C7orf50	Q9BRJ6	194 aa	Known RBP	4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	GINS4	Q9BRT9	223 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	GABARAPL3	Q9BY60	117 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	SLC35B3	Q9H1N7	401 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	TMEM231	Q9H6L2	316 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	MED4	Q9NPJ6	270 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	NDUFA4L2	Q9NRX3	87 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	SPATA2	Q9UM82	520 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	KCNK7	Q9Y2U2	307 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	GOLT1B	Q9Y3E0	138 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	HLA-DRB4	X5D2U9	266 aa		4.36	□□□□□ -1.71
DNMT1-222	ENST00000590619	IGKV1D-8	A0A087WSZ0	117 aa		4.35	□□□□□ -1.71
DNMT1-222	ENST00000590619	TRAV26-1	A0A087WT03	109 aa		4.35	□□□□□ -1.71
DNMT1-222	ENST00000590619		A0A0J9YY99	117 aa		4.35	□□□□□ -1.71
DNMT1-222	ENST00000590619	TCRBV3S1	A0A5B6	114 aa		4.35	□□□□□ -1.71
DNMT1-222	ENST00000590619	PLAC8L1	A1L4L8	177 aa		4.35	□□□□□ -1.71
DNMT1-222	ENST00000590619	SNTN	A6NMZ2	147 aa		4.35	□□□□□ -1.71
DNMT1-222	ENST00000590619	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.35	□□□□□ -1.71
DNMT1-222	ENST00000590619	FAM90A26	D6RGX4	464 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms