RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 A0A087WW49 117 aa16.46■□□□□ 0.23
ATG4D-212ENST00000590096 ANKRD34BA5PLL1 514 aa16.46■□□□□ 0.23
ATG4D-212ENST00000590096 ZNF343Q6P1L6 599 aa16.46■□□□□ 0.23
ATG4D-212ENST00000590096 RANGRFQ9HD47 186 aaPredicted RBP16.46■□□□□ 0.23
ATG4D-212ENST00000590096 THYN1Q9P016 225 aa16.46■□□□□ 0.23
ATG4D-212ENST00000590096 CACNG5Q9UF02 275 aa16.46■□□□□ 0.23
ATG4D-212ENST00000590096 IGLV11-55A0A075B6I3 123 aa16.45■□□□□ 0.22
ATG4D-212ENST00000590096 DUXBA0A1W2PPF3 345 aa16.45■□□□□ 0.22
ATG4D-212ENST00000590096 ERHP84090 104 aaKnown RBP16.45■□□□□ 0.22
ATG4D-212ENST00000590096 KLK9Q2XQG4 91 aa16.45■□□□□ 0.22
ATG4D-212ENST00000590096 SPINK9Q5DT21 86 aa16.45■□□□□ 0.22
ATG4D-212ENST00000590096 Q6ZRM9 215 aa16.45■□□□□ 0.22
ATG4D-212ENST00000590096 LYZL2Q7Z4W2 148 aa16.45■□□□□ 0.22
ATG4D-212ENST00000590096 OR1L6Q8NGR2 347 aa16.45■□□□□ 0.22
ATG4D-212ENST00000590096 MCRIP2Q9BUT9 160 aaKnown RBP16.45■□□□□ 0.22
ATG4D-212ENST00000590096 C20orf85Q9H1P6 137 aa16.45■□□□□ 0.22
ATG4D-212ENST00000590096 ENY2Q9NPA8 101 aa16.45■□□□□ 0.22
ATG4D-212ENST00000590096 KLK9Q9UKQ9 250 aa16.45■□□□□ 0.22
ATG4D-212ENST00000590096 F11RQ9Y624 299 aaKnown RBP16.45■□□□□ 0.22
ATG4D-212ENST00000590096 WIPF1O43516 503 aa16.44■□□□□ 0.22
ATG4D-212ENST00000590096 DUS4LO95620 317 aaKnown RBP16.44■□□□□ 0.22
ATG4D-212ENST00000590096 HLA-AP01891 365 aaKnown RBP16.44■□□□□ 0.22
ATG4D-212ENST00000590096 SULT1A3P0DMM9 295 aa16.44■□□□□ 0.22
ATG4D-212ENST00000590096 SULT1A4P0DMN0 295 aa16.44■□□□□ 0.22
ATG4D-212ENST00000590096 HOXA1P49639 335 aaPredicted RBP16.44■□□□□ 0.22
ATG4D-212ENST00000590096 ASAH1Q13510 395 aa16.44■□□□□ 0.22
ATG4D-212ENST00000590096 ANKRD55Q3KP44 614 aa16.44■□□□□ 0.22
ATG4D-212ENST00000590096 FAM209BQ5JX69 171 aa16.44■□□□□ 0.22
ATG4D-212ENST00000590096 SLC25A24Q6NUK1 477 aa16.44■□□□□ 0.22
ATG4D-212ENST00000590096 PEF1Q9UBV8 284 aaKnown RBP16.44■□□□□ 0.22
ATG4D-212ENST00000590096 TBC1D24Q9ULP9 559 aa16.44■□□□□ 0.22
ATG4D-212ENST00000590096 FAM240BA0A1B0GVZ2 78 aa16.43■□□□□ 0.22
ATG4D-212ENST00000590096 C9orf170A2RU37 121 aa16.43■□□□□ 0.22
ATG4D-212ENST00000590096 NDUFB8O95169 186 aa16.43■□□□□ 0.22
ATG4D-212ENST00000590096 TCRBP04435 133 aa16.43■□□□□ 0.22
ATG4D-212ENST00000590096 OR4E1P0C645 316 aa16.43■□□□□ 0.22
ATG4D-212ENST00000590096 IGLL1P15814 213 aa16.43■□□□□ 0.22
ATG4D-212ENST00000590096 ANXA7P20073 488 aaKnown RBP16.43■□□□□ 0.22
ATG4D-212ENST00000590096 C4orf46Q504U0 113 aa16.43■□□□□ 0.22
ATG4D-212ENST00000590096 OR2C3Q8N628 320 aa16.43■□□□□ 0.22
ATG4D-212ENST00000590096 LRTM2Q8N967 370 aa16.43■□□□□ 0.22
ATG4D-212ENST00000590096 EEF1AKMT3Q96AZ1 226 aa16.43■□□□□ 0.22
ATG4D-212ENST00000590096 GPR61Q9BZJ8 451 aa16.43■□□□□ 0.22
ATG4D-212ENST00000590096 CACFD1Q9UGQ2 172 aa16.43■□□□□ 0.22
ATG4D-212ENST00000590096 NOTCH3Q9UM47 2321 aa16.43■□□□□ 0.22
ATG4D-212ENST00000590096 G3V4G9 280 aa16.42■□□□□ 0.22
ATG4D-212ENST00000590096 ZP3P21754 424 aa16.42■□□□□ 0.22
ATG4D-212ENST00000590096 SLURP1P55000 103 aa16.42■□□□□ 0.22
ATG4D-212ENST00000590096 SPCS3P61009 180 aa16.42■□□□□ 0.22
ATG4D-212ENST00000590096 DHRS2Q13268 280 aa16.42■□□□□ 0.22
ATG4D-212ENST00000590096 AARDQ4LEZ3 155 aa16.42■□□□□ 0.22
ATG4D-212ENST00000590096 NMSQ5H8A3 153 aa16.42■□□□□ 0.22
ATG4D-212ENST00000590096 LYG2Q86SG7 212 aa16.42■□□□□ 0.22
ATG4D-212ENST00000590096 OR1P1Q8NH06 330 aa16.42■□□□□ 0.22
ATG4D-212ENST00000590096 OR52E5Q8NH55 327 aa16.42■□□□□ 0.22
ATG4D-212ENST00000590096 CXorf58Q96LI9 332 aa16.42■□□□□ 0.22
ATG4D-212ENST00000590096 TRAV6A0A075B6T7 132 aa16.41■□□□□ 0.22
ATG4D-212ENST00000590096 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.41■□□□□ 0.22
ATG4D-212ENST00000590096 SNCAP37840 140 aa16.41■□□□□ 0.22
ATG4D-212ENST00000590096 SMCO1Q147U7 214 aa16.41■□□□□ 0.22
ATG4D-212ENST00000590096 OXLD1Q5BKU9 147 aa16.41■□□□□ 0.22
ATG4D-212ENST00000590096 SAMD5Q5TGI4 173 aa16.41■□□□□ 0.22
ATG4D-212ENST00000590096 C1QL4Q86Z23 238 aa16.41■□□□□ 0.22
ATG4D-212ENST00000590096 ZNF114Q8NC26 417 aa16.41■□□□□ 0.22
ATG4D-212ENST00000590096 COQ8AQ8NI60 647 aa16.41■□□□□ 0.22
ATG4D-212ENST00000590096 NUDT15Q9NV35 164 aa16.41■□□□□ 0.22
ATG4D-212ENST00000590096 DMRT1Q9Y5R6 373 aa16.41■□□□□ 0.22
ATG4D-212ENST00000590096 TGP01266 2768 aa16.4■□□□□ 0.22
ATG4D-212ENST00000590096 INS-IGF2F8WCM5 200 aa16.4■□□□□ 0.22
ATG4D-212ENST00000590096 OVOL1O14753 267 aa16.4■□□□□ 0.22
ATG4D-212ENST00000590096 TRBV12-3P01733 135 aa16.4■□□□□ 0.22
ATG4D-212ENST00000590096 HOXD3P31249 432 aaPredicted RBP16.4■□□□□ 0.22
ATG4D-212ENST00000590096 ENKURQ8TC29 256 aa16.4■□□□□ 0.22
ATG4D-212ENST00000590096 DCUN1D4Q92564 292 aa16.4■□□□□ 0.22
ATG4D-212ENST00000590096 TMED3Q9Y3Q3 217 aa16.4■□□□□ 0.22
ATG4D-212ENST00000590096 S4R3C0 116 aa16.4■□□□□ 0.22
ATG4D-212ENST00000590096 TRBV7-1A0A0A6YYK4 115 aa16.39■□□□□ 0.21
ATG4D-212ENST00000590096 A0A1B0GU03 582 aa16.39■□□□□ 0.21
ATG4D-212ENST00000590096 MFSD2BA6NFX1 497 aa16.39■□□□□ 0.21
ATG4D-212ENST00000590096 CEBPZOSA8MTT3 80 aa16.39■□□□□ 0.21
ATG4D-212ENST00000590096 IGHV3-23P01764 117 aa16.39■□□□□ 0.21
ATG4D-212ENST00000590096 MFAP2P55001 183 aa16.39■□□□□ 0.21
ATG4D-212ENST00000590096 IFITM3Q01628 133 aa16.39■□□□□ 0.21
ATG4D-212ENST00000590096 RPEL1Q2QD12 228 aa16.39■□□□□ 0.21
ATG4D-212ENST00000590096 OR1S1Q8NH92 325 aa16.39■□□□□ 0.21
ATG4D-212ENST00000590096 DLX4Q92988 240 aaPredicted RBP16.39■□□□□ 0.21
ATG4D-212ENST00000590096 NXPH3O95157 252 aa16.38■□□□□ 0.21
ATG4D-212ENST00000590096 HOXB5P09067 269 aa16.38■□□□□ 0.21
ATG4D-212ENST00000590096 H2AFB2P0C5Z0 115 aa16.38■□□□□ 0.21
ATG4D-212ENST00000590096 SUB1P53999 127 aaKnown RBP eCLIP16.38■□□□□ 0.21
ATG4D-212ENST00000590096 DEFA1P59665 94 aa16.38■□□□□ 0.21
ATG4D-212ENST00000590096 DEFA3P59666 94 aa16.38■□□□□ 0.21
ATG4D-212ENST00000590096 PDLIM3Q53GG5 364 aaPredicted RBP16.38■□□□□ 0.21
ATG4D-212ENST00000590096 CLEC19AQ6UXS0 136 aa16.38■□□□□ 0.21
ATG4D-212ENST00000590096 VN1R17PQ8TDU5 208 aa16.38■□□□□ 0.21
ATG4D-212ENST00000590096 SEC14L6B5MCN3 397 aa16.37■□□□□ 0.21
ATG4D-212ENST00000590096 SLC25A6P12236 298 aa16.37■□□□□ 0.21
ATG4D-212ENST00000590096 MISP3Q96FF7 219 aa16.37■□□□□ 0.21
ATG4D-212ENST00000590096 CCDC140Q96MF4 163 aa16.37■□□□□ 0.21
ATG4D-212ENST00000590096 HEYLQ9NQ87 328 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms