RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 C5orf66Q9H5L9 145 aa12.91□□□□□ -0.34
H3F3B-208ENST00000589599 NAA60Q9H7X0 242 aa12.91□□□□□ -0.34
H3F3B-208ENST00000589599 SIGLEC8Q9NYZ4 499 aa12.91□□□□□ -0.34
H3F3B-208ENST00000589599 KCNIP3Q9Y2W7 256 aa12.91□□□□□ -0.34
H3F3B-208ENST00000589599 V9GYH0 126 aa12.91□□□□□ -0.34
H3F3B-208ENST00000589599 CSN3P07498 182 aa12.9□□□□□ -0.34
H3F3B-208ENST00000589599 ERHP84090 104 aaKnown RBP12.9□□□□□ -0.34
H3F3B-208ENST00000589599 PRCDQ00LT1 54 aa12.9□□□□□ -0.34
H3F3B-208ENST00000589599 CD69Q07108 199 aa12.9□□□□□ -0.34
H3F3B-208ENST00000589599 GPHB5Q86YW7 130 aa12.9□□□□□ -0.34
H3F3B-208ENST00000589599 SGPP2Q8IWX5 399 aa12.9□□□□□ -0.34
H3F3B-208ENST00000589599 TOMM5Q8N4H5 51 aa12.9□□□□□ -0.34
H3F3B-208ENST00000589599 CCDC140Q96MF4 163 aa12.9□□□□□ -0.34
H3F3B-208ENST00000589599 PDCD10Q9BUL8 212 aa12.9□□□□□ -0.34
H3F3B-208ENST00000589599 PLEKHA3Q9HB20 300 aa12.9□□□□□ -0.34
H3F3B-208ENST00000589599 LSM4Q9Y4Z0 139 aaKnown RBP12.9□□□□□ -0.34
H3F3B-208ENST00000589599 DMRT1Q9Y5R6 373 aa12.9□□□□□ -0.34
H3F3B-208ENST00000589599 MFSD2BA6NFX1 497 aa12.89□□□□□ -0.35
H3F3B-208ENST00000589599 CRYM-AS1A6NIL9 109 aa12.89□□□□□ -0.35
H3F3B-208ENST00000589599 CDS2O95674 445 aa12.89□□□□□ -0.35
H3F3B-208ENST00000589599 IFNA17P01571 189 aa12.89□□□□□ -0.35
H3F3B-208ENST00000589599 HLA-AP01891 365 aaKnown RBP12.89□□□□□ -0.35
H3F3B-208ENST00000589599 OR5AC1P0C628 307 aa12.89□□□□□ -0.35
H3F3B-208ENST00000589599 GP9P14770 177 aa12.89□□□□□ -0.35
H3F3B-208ENST00000589599 KLF9Q13886 244 aaPredicted RBP12.89□□□□□ -0.35
H3F3B-208ENST00000589599 IZUMO4Q1ZYL8 232 aa12.89□□□□□ -0.35
H3F3B-208ENST00000589599 OR2C3Q8N628 320 aa12.89□□□□□ -0.35
H3F3B-208ENST00000589599 OR1P1Q8NH06 330 aa12.89□□□□□ -0.35
H3F3B-208ENST00000589599 ZNF502Q8TBZ5 544 aa12.89□□□□□ -0.35
H3F3B-208ENST00000589599 B9D2Q9BPU9 175 aa12.89□□□□□ -0.35
H3F3B-208ENST00000589599 A0A0B4J293 547 aa12.88□□□□□ -0.35
H3F3B-208ENST00000589599 ZNF320A2RRD8 509 aa12.88□□□□□ -0.35
H3F3B-208ENST00000589599 LGALS9O00182 355 aa12.88□□□□□ -0.35
H3F3B-208ENST00000589599 P0C879 139 aa12.88□□□□□ -0.35
H3F3B-208ENST00000589599 GPR183P32249 361 aa12.88□□□□□ -0.35
H3F3B-208ENST00000589599 ETV6P41212 452 aa12.88□□□□□ -0.35
H3F3B-208ENST00000589599 ZNF79Q15937 498 aa12.88□□□□□ -0.35
H3F3B-208ENST00000589599 PLET1Q6UQ28 207 aa12.88□□□□□ -0.35
H3F3B-208ENST00000589599 HAPLN4Q86UW8 402 aa12.88□□□□□ -0.35
H3F3B-208ENST00000589599 FAM219AQ8IW50 185 aa12.88□□□□□ -0.35
H3F3B-208ENST00000589599 SLC35G3Q8N808 338 aa12.88□□□□□ -0.35
H3F3B-208ENST00000589599 GLYATL2Q8WU03 294 aa12.88□□□□□ -0.35
H3F3B-208ENST00000589599 DEDD2Q8WXF8 326 aa12.88□□□□□ -0.35
H3F3B-208ENST00000589599 RBPMSQ93062 196 aaKnown RBP12.88□□□□□ -0.35
H3F3B-208ENST00000589599 TRIM63Q969Q1 353 aa12.88□□□□□ -0.35
H3F3B-208ENST00000589599 SMAD5-AS1Q9Y6J3 95 aa12.88□□□□□ -0.35
H3F3B-208ENST00000589599 SNCAP37840 140 aa12.87□□□□□ -0.35
H3F3B-208ENST00000589599 INPP1P49441 399 aa12.87□□□□□ -0.35
H3F3B-208ENST00000589599 MFAP2P55001 183 aa12.87□□□□□ -0.35
H3F3B-208ENST00000589599 LCN12Q6JVE5 192 aa12.87□□□□□ -0.35
H3F3B-208ENST00000589599 ATP6V0BQ99437 205 aa12.87□□□□□ -0.35
H3F3B-208ENST00000589599 ENY2Q9NPA8 101 aa12.87□□□□□ -0.35
H3F3B-208ENST00000589599 C21orf62Q9NYP8 219 aa12.87□□□□□ -0.35
H3F3B-208ENST00000589599 ST8SIA3O43173 380 aa12.86□□□□□ -0.35
H3F3B-208ENST00000589599 AKR1C4P17516 323 aa12.86□□□□□ -0.35
H3F3B-208ENST00000589599 TMEM268Q5VZI3 342 aa12.86□□□□□ -0.35
H3F3B-208ENST00000589599 ZNF57Q68EA5 555 aaPredicted RBP12.86□□□□□ -0.35
H3F3B-208ENST00000589599 SELENOHQ8IZQ5 122 aaKnown RBP12.86□□□□□ -0.35
H3F3B-208ENST00000589599 OR2K2Q8NGT1 345 aa12.86□□□□□ -0.35
H3F3B-208ENST00000589599 DYNLRB2Q8TF09 96 aa12.86□□□□□ -0.35
H3F3B-208ENST00000589599 SCARB1Q8WTV0 552 aa12.86□□□□□ -0.35
H3F3B-208ENST00000589599 MISP3Q96FF7 219 aa12.86□□□□□ -0.35
H3F3B-208ENST00000589599 PALMDQ9NP74 551 aa12.86□□□□□ -0.35
H3F3B-208ENST00000589599 ZC4H2Q9NQZ6 224 aa12.86□□□□□ -0.35
H3F3B-208ENST00000589599 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.86□□□□□ -0.35
H3F3B-208ENST00000589599 GAR1Q9NY12 217 aaKnown RBP12.86□□□□□ -0.35
H3F3B-208ENST00000589599 C2orf70A6NJV1 201 aa12.85□□□□□ -0.35
H3F3B-208ENST00000589599 TGOLN2O43493 480 aa12.85□□□□□ -0.35
H3F3B-208ENST00000589599 ANXA3P12429 323 aa12.85□□□□□ -0.35
H3F3B-208ENST00000589599 FOLR2P14207 255 aa12.85□□□□□ -0.35
H3F3B-208ENST00000589599 SUB1P53999 127 aaKnown RBP eCLIP12.85□□□□□ -0.35
H3F3B-208ENST00000589599 SPINK9Q5DT21 86 aa12.85□□□□□ -0.35
H3F3B-208ENST00000589599 SPSB3Q6PJ21 355 aa12.85□□□□□ -0.35
H3F3B-208ENST00000589599 ZNF114Q8NC26 417 aa12.85□□□□□ -0.35
H3F3B-208ENST00000589599 IL22RA2Q969J5 263 aa12.85□□□□□ -0.35
H3F3B-208ENST00000589599 GALNT14Q96FL9 552 aa12.85□□□□□ -0.35
H3F3B-208ENST00000589599 BSCL2Q96G97 398 aaPredicted RBP12.85□□□□□ -0.35
H3F3B-208ENST00000589599 CACFD1Q9UGQ2 172 aa12.85□□□□□ -0.35
H3F3B-208ENST00000589599 TMEM56-RWDD3S4R434 201 aa12.85□□□□□ -0.35
H3F3B-208ENST00000589599 IGHV3-21A0A0B4J1V1 117 aa12.84□□□□□ -0.35
H3F3B-208ENST00000589599 PIGBOS1A0A0B4J2F0 54 aa12.84□□□□□ -0.35
H3F3B-208ENST00000589599 OR2T8A6NH00 312 aa12.84□□□□□ -0.35
H3F3B-208ENST00000589599 K7EIM0 57 aa12.84□□□□□ -0.35
H3F3B-208ENST00000589599 NHLRC4P0CG21 123 aaPredicted RBP12.84□□□□□ -0.35
H3F3B-208ENST00000589599 HOXA1P49639 335 aaPredicted RBP12.84□□□□□ -0.35
H3F3B-208ENST00000589599 SPCS3P61009 180 aa12.84□□□□□ -0.35
H3F3B-208ENST00000589599 SRPXP78539 464 aa12.84□□□□□ -0.35
H3F3B-208ENST00000589599 Q56UQ5 140 aa12.84□□□□□ -0.35
H3F3B-208ENST00000589599 TRIQKQ629K1 86 aa12.84□□□□□ -0.35
H3F3B-208ENST00000589599 UBAC2Q8NBM4 344 aa12.84□□□□□ -0.35
H3F3B-208ENST00000589599 LHFPL5Q8TAF8 219 aa12.84□□□□□ -0.35
H3F3B-208ENST00000589599 SLC25A21Q9BQT8 299 aaPredicted RBP12.84□□□□□ -0.35
H3F3B-208ENST00000589599 SRRQ9GZT4 340 aa12.84□□□□□ -0.35
H3F3B-208ENST00000589599 TECRQ9NZ01 308 aaKnown RBP12.84□□□□□ -0.35
H3F3B-208ENST00000589599 UFC1Q9Y3C8 167 aa12.84□□□□□ -0.35
H3F3B-208ENST00000589599 SORL1Q92673 2214 aa12.84□□□□□ -0.35
H3F3B-208ENST00000589599 A0A0G2JRQ6 117 aa12.83□□□□□ -0.36
H3F3B-208ENST00000589599 INS-IGF2F8WCM5 200 aa12.83□□□□□ -0.36
H3F3B-208ENST00000589599 CBLN1P23435 193 aa12.83□□□□□ -0.36
H3F3B-208ENST00000589599 MFAP4P55083 255 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms