RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 CEP250Q9BV73 2442 aa15.23■□□□□ 0.03
DDX39A-206ENST00000587730 SNURFLB1AK76 121 aa15.22■□□□□ 0.03
DDX39A-206ENST00000587730 INS-IGF2F8WCM5 200 aa15.22■□□□□ 0.03
DDX39A-206ENST00000587730 STUMQ69YW2 141 aa15.22■□□□□ 0.03
DDX39A-206ENST00000587730 MIR17HGQ75NE6 70 aa15.22■□□□□ 0.03
DDX39A-206ENST00000587730 OSR1Q8TAX0 266 aaPredicted RBP15.22■□□□□ 0.03
DDX39A-206ENST00000587730 ITLN1Q8WWA0 313 aa15.22■□□□□ 0.03
DDX39A-206ENST00000587730 SERF1AO75920 110 aa15.22■□□□□ 0.03
DDX39A-206ENST00000587730 HLA-DQA1P01909 254 aa15.22■□□□□ 0.03
DDX39A-206ENST00000587730 BRS3P32247 399 aa15.22■□□□□ 0.03
DDX39A-206ENST00000587730 ZNF83P51522 516 aa15.22■□□□□ 0.03
DDX39A-206ENST00000587730 GTF3C1Q12789 2109 aa15.22■□□□□ 0.03
DDX39A-206ENST00000587730 RASL11AQ6T310 242 aa15.22■□□□□ 0.03
DDX39A-206ENST00000587730 SLC25A48Q6ZT89 311 aaKnown RBP15.22■□□□□ 0.03
DDX39A-206ENST00000587730 MIEN1Q9BRT3 115 aa15.22■□□□□ 0.03
DDX39A-206ENST00000587730 SAMD10Q9BYL1 202 aa15.22■□□□□ 0.03
DDX39A-206ENST00000587730 COMMD5Q9GZQ3 224 aa15.22■□□□□ 0.03
DDX39A-206ENST00000587730 SLC35D1Q9NTN3 355 aa15.22■□□□□ 0.03
DDX39A-206ENST00000587730 ZNF586Q9NXT0 402 aa15.22■□□□□ 0.03
DDX39A-206ENST00000587730 M0R1B8 84 aa15.21■□□□□ 0.03
DDX39A-206ENST00000587730 SLC17A3O00476 420 aa15.21■□□□□ 0.03
DDX39A-206ENST00000587730 NKX2-8O15522 239 aa15.21■□□□□ 0.03
DDX39A-206ENST00000587730 FOXH1O75593 365 aa15.21■□□□□ 0.03
DDX39A-206ENST00000587730 C8orf88P0DMB2 117 aa15.21■□□□□ 0.03
DDX39A-206ENST00000587730 HNF1AP20823 631 aa15.21■□□□□ 0.03
DDX39A-206ENST00000587730 IER3P46695 156 aa15.21■□□□□ 0.03
DDX39A-206ENST00000587730 TOMM20LQ6UXN7 152 aa15.21■□□□□ 0.03
DDX39A-206ENST00000587730 LRP11Q86VZ4 500 aa15.21■□□□□ 0.03
DDX39A-206ENST00000587730 SIGLECL1Q8N7X8 197 aa15.21■□□□□ 0.03
DDX39A-206ENST00000587730 HINT2Q9BX68 163 aa15.21■□□□□ 0.03
DDX39A-206ENST00000587730 SNHG12Q9BXW3 62 aa15.21■□□□□ 0.03
DDX39A-206ENST00000587730 RPUSD1Q9UJJ7 312 aaKnown RBP15.21■□□□□ 0.03
DDX39A-206ENST00000587730 CACNA1GO43497 2377 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 hADV38S2A0JD32 116 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 GRIFINA4D1Z8 144 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 EREGO14944 169 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 NUPR1O60356 82 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 TPTE2P1Q5T6R2 138 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 Q6ZWC4 215 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 HSPB9Q9BQS6 159 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 TP53TG3Q9ULZ0 132 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 DOCK11Q5JSL3 2073 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 PCNX2A6NKB5 2137 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 CACNA1AO00555 2505 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 SPRY3O43610 288 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 OR7C2O60412 319 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 APOA2P02652 100 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 REG1AP05451 166 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 PPOXP50336 477 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 C1orf229Q6ZS94 237 aaPredicted RBP15.2■□□□□ 0.02
DDX39A-206ENST00000587730 OR8I2Q8N0Y5 310 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 OR4A5Q8NH83 315 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 ZNF714Q96N38 554 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 VAMP8Q9BV40 100 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 GAL3ST2Q9H3Q3 398 aa15.2■□□□□ 0.02
DDX39A-206ENST00000587730 CNOT1A5YKK6 2376 aaKnown RBP15.19■□□□□ 0.02
DDX39A-206ENST00000587730 AMY1AP04745 511 aa15.19■□□□□ 0.02
DDX39A-206ENST00000587730 IRF2P14316 349 aa15.19■□□□□ 0.02
DDX39A-206ENST00000587730 CRYBB3P26998 211 aa15.19■□□□□ 0.02
DDX39A-206ENST00000587730 ERHP84090 104 aaKnown RBP15.19■□□□□ 0.02
DDX39A-206ENST00000587730 TNFAIP6P98066 277 aaPredicted RBP15.19■□□□□ 0.02
DDX39A-206ENST00000587730 CD69Q07108 199 aa15.19■□□□□ 0.02
DDX39A-206ENST00000587730 MSMPQ1L6U9 139 aa15.19■□□□□ 0.02
DDX39A-206ENST00000587730 KRTCAP3Q53RY4 240 aa15.19■□□□□ 0.02
DDX39A-206ENST00000587730 ZNF788Q6ZQV5 615 aa15.19■□□□□ 0.02
DDX39A-206ENST00000587730 DMRTC2Q8IXT2 367 aaPredicted RBP15.19■□□□□ 0.02
DDX39A-206ENST00000587730 OR4B1Q8NGF8 309 aa15.19■□□□□ 0.02
DDX39A-206ENST00000587730 CHRDL1Q9BU40 450 aa15.19■□□□□ 0.02
DDX39A-206ENST00000587730 CBLN4Q9NTU7 201 aa15.19■□□□□ 0.02
DDX39A-206ENST00000587730 NAT8BQ9UHF3 227 aa15.19■□□□□ 0.02
DDX39A-206ENST00000587730 TEX50A0A1B0GTY4 177 aa15.18■□□□□ 0.02
DDX39A-206ENST00000587730 A0A1W2PN81 502 aa15.18■□□□□ 0.02
DDX39A-206ENST00000587730 NKX6-3A6NJ46 265 aa15.18■□□□□ 0.02
DDX39A-206ENST00000587730 MMP23AO75900 390 aa15.18■□□□□ 0.02
DDX39A-206ENST00000587730 ACTL6BO94805 426 aa15.18■□□□□ 0.02
DDX39A-206ENST00000587730 IGHV3-7P01780 117 aa15.18■□□□□ 0.02
DDX39A-206ENST00000587730 TDGF1P3P51864 188 aa15.18■□□□□ 0.02
DDX39A-206ENST00000587730 MEF2CQ06413 473 aaPredicted RBP15.18■□□□□ 0.02
DDX39A-206ENST00000587730 SVIPQ8NHG7 77 aa15.18■□□□□ 0.02
DDX39A-206ENST00000587730 WFIKKN1Q96NZ8 548 aa15.18■□□□□ 0.02
DDX39A-206ENST00000587730 GAFA1Q96PS6 74 aa15.18■□□□□ 0.02
DDX39A-206ENST00000587730 GCM1Q9NP62 436 aa15.18■□□□□ 0.02
DDX39A-206ENST00000587730 LINC00312Q9Y6C7 94 aa15.18■□□□□ 0.02
DDX39A-206ENST00000587730 SMIM27A0A1W2PRY6 76 aa15.17■□□□□ 0.02
DDX39A-206ENST00000587730 LINC00310P59036 64 aa15.17■□□□□ 0.02
DDX39A-206ENST00000587730 ZNF124Q15973 351 aa15.17■□□□□ 0.02
DDX39A-206ENST00000587730 TEX36Q5VZQ5 186 aa15.17■□□□□ 0.02
DDX39A-206ENST00000587730 FAM71F2Q6NXP2 309 aa15.17■□□□□ 0.02
DDX39A-206ENST00000587730 OR1L4Q8NGR5 311 aa15.17■□□□□ 0.02
DDX39A-206ENST00000587730 VSTM2AQ8TAG5 236 aa15.17■□□□□ 0.02
DDX39A-206ENST00000587730 LEAP2Q969E1 77 aa15.17■□□□□ 0.02
DDX39A-206ENST00000587730 SLC25A33Q9BSK2 321 aa15.17■□□□□ 0.02
DDX39A-206ENST00000587730 CDC42EP3Q9UKI2 254 aa15.17■□□□□ 0.02
DDX39A-206ENST00000587730 CACNA1DQ01668 2161 aa15.17■□□□□ 0.02
DDX39A-206ENST00000587730 A0A1B0GUS0 222 aa15.17■□□□□ 0.02
DDX39A-206ENST00000587730 CT45A6P0DMU7 189 aa15.17■□□□□ 0.02
DDX39A-206ENST00000587730 CT45A5P0DMU8 189 aa15.17■□□□□ 0.02
DDX39A-206ENST00000587730 CT45A7P0DMV0 189 aa15.17■□□□□ 0.02
DDX39A-206ENST00000587730 RNASE2P10153 161 aaKnown RBP15.17■□□□□ 0.02
DDX39A-206ENST00000587730 IBA57Q5T440 356 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms