RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 MAGT1Q9H0U3 335 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 ENY2Q9NPA8 101 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 TMEM140Q9NV12 185 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 BET1LQ9NYM9 111 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 FOXA2Q9Y261 457 aaPredicted RBP6.25□□□□□ -1.41
VMP1-204ENST00000587259 WASHC3Q9Y3C0 194 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 KPTNQ9Y664 436 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 RYR3Q15413 4870 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 IGHV2-26A0A0B4J1V2 119 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 A0A1W2PRX2 142 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 MEX3AA1L020 520 aaKnown RBP6.24□□□□□ -1.41
VMP1-204ENST00000587259 IGSF23A1L1A6 192 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 CEBPZOSA8MTT3 80 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 TEX46H3BTG2 121 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 H7C2Y5 167 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 SHOXO15266 292 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 FGF16O43320 207 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 IFNA17P01571 189 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 OR8U8P0C7N1 319 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 SPP1P10451 314 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 SULT1A2P50226 295 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 F2RL1P55085 397 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 RAB11AP62491 216 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 HLA-DRB5Q30154 266 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 TMEM177Q53S58 311 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 RPL7L1Q6DKI1 246 aaKnown RBP6.24□□□□□ -1.41
VMP1-204ENST00000587259 UQCC3Q6UW78 93 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 DPPA3Q6W0C5 159 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 IL34Q6ZMJ4 242 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 Q6ZRM9 215 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 HSD17B13Q7Z5P4 300 aaPredicted RBP6.24□□□□□ -1.41
VMP1-204ENST00000587259 SLC7A5P1Q8MH63 180 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 LILRB2Q8N423 598 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 COMMD1Q8N668 190 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 ZNF383Q8NA42 475 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 OR10P1Q8NGE3 313 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 OR5B3Q8NH48 314 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 SCGB1C1Q8TD33 95 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 TMED6Q8WW62 240 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 CFHR4Q92496 578 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 LEAP2Q969E1 77 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 FLYWCH2Q96CP2 140 aaKnown RBP6.24□□□□□ -1.41
VMP1-204ENST00000587259 SSX3Q99909 188 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 GGACTQ9BVM4 153 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 RBKSQ9H477 322 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 PARP11Q9NR21 331 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 KCNIP2Q9NS61 270 aa6.24□□□□□ -1.41
VMP1-204ENST00000587259 RAB19A4D1S5 217 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 FAM24AA6NFZ4 105 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 ZNF705EA8MWA4 302 aaPredicted RBP6.23□□□□□ -1.41
VMP1-204ENST00000587259 OOSP1A8MZH6 123 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 KRBOX1C9JBD0 128 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 H0YJW9 148 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 MPDU1O75352 247 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 PROP1O75360 226 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 MMP23AO75900 390 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 IGLV1-47P01700 117 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 CT45A6P0DMU7 189 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 CT45A5P0DMU8 189 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 CT45A7P0DMV0 189 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 IGLL1P15814 213 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 LGALS7P47929 136 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 DYNLT3P51808 116 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 PAX9P55771 341 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 BRWD1-AS2P59051 145 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 RAB2AP61019 212 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 NHLH2Q02577 135 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 TMEM95Q3KNT9 176 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 VMA21Q3ZAQ7 101 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 SPANXN5Q5MJ07 72 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 OR4A47Q6IF82 309 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 FAM53AQ6NSI3 398 aaPredicted RBP6.23□□□□□ -1.41
VMP1-204ENST00000587259 CCDC144NLQ6NUI1 221 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 TMEM14EPQ6UXP3 125 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 Q6ZS46 218 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 LFNGQ8NES3 379 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 ST6GALNAC6Q969X2 333 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 RPEQ96AT9 228 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 HARBI1Q96MB7 349 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 RNF5Q99942 180 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 NABP2Q9BQ15 211 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 PSMG3Q9BT73 122 aaPredicted RBP6.23□□□□□ -1.41
VMP1-204ENST00000587259 SMIM3Q9BZL3 60 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 TMEM14BQ9NUH8 114 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 TIMM9Q9Y5J7 89 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 COL7A1Q02388 2944 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 TNCP24821 2201 aa6.23□□□□□ -1.41
VMP1-204ENST00000587259 A0A1W2PN81 502 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 A0A1W2PPE3 182 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 LEUTXA8MZ59 168 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 FNDC10F2Z333 226 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 BUB1B-PAK6H3BSN5 160 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 K7EIL1 84 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 CST7O76096 145 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 KBTBD11O94819 623 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 NXPH3O95157 252 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 IGHV3-7P01780 117 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 ARG1P05089 322 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 IAPPP10997 89 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 CHRNA7P36544 502 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms