RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 IFNA17P01571 189 aa10.06□□□□□ -0.8
CDK5RAP3-234ENST00000584525 OR13C7P0DN81 318 aa10.06□□□□□ -0.8
CDK5RAP3-234ENST00000584525 RPEL1Q2QD12 228 aa10.06□□□□□ -0.8
CDK5RAP3-234ENST00000584525 ADAMTSL5Q6ZMM2 481 aa10.06□□□□□ -0.8
CDK5RAP3-234ENST00000584525 NECAP1Q8NC96 275 aa10.06□□□□□ -0.8
CDK5RAP3-234ENST00000584525 EEF1AKMT3Q96AZ1 226 aa10.06□□□□□ -0.8
CDK5RAP3-234ENST00000584525 SEC22AQ96IW7 307 aa10.06□□□□□ -0.8
CDK5RAP3-234ENST00000584525 OR4C12Q96R67 309 aa10.06□□□□□ -0.8
CDK5RAP3-234ENST00000584525 SLC25A21Q9BQT8 299 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-234ENST00000584525 TM2D3Q9BRN9 247 aa10.06□□□□□ -0.8
CDK5RAP3-234ENST00000584525 C5orf66Q9H5L9 145 aa10.06□□□□□ -0.8
CDK5RAP3-234ENST00000584525 PLEKHA3Q9HB20 300 aa10.06□□□□□ -0.8
CDK5RAP3-234ENST00000584525 AKIP1Q9NQ31 210 aa10.06□□□□□ -0.8
CDK5RAP3-234ENST00000584525 PEF1Q9UBV8 284 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-234ENST00000584525 FBXL7Q9UJT9 491 aa10.06□□□□□ -0.8
CDK5RAP3-234ENST00000584525 STARD9Q9P2P6 4700 aa10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 CRYM-AS1A6NIL9 109 aa10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 BRI3O95415 125 aa10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 IGHV4-30-4P0DP06 118 aa10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 AREGP15514 252 aa10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 UCP1P25874 307 aa10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 HOXA1P49639 335 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 SRPXP78539 464 aa10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 ERHP84090 104 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 RBMS2Q15434 407 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 C15orf32Q32M92 178 aa10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 TMEM268Q5VZI3 342 aa10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 SLC25A24Q6NUK1 477 aa10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 ACSM6Q6P461 480 aa10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 CADM3Q8N126 398 aa10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 OR1L6Q8NGR2 347 aa10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 S100ZQ8WXG8 99 aa10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 RBPMSQ93062 196 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 C7orf50Q9BRJ6 194 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 RTBDNQ9BSG5 229 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 ELOVL1Q9BW60 279 aa10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 TMEM222Q9H0R3 208 aa10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 BATF3Q9NR55 127 aa10.05□□□□□ -0.8
CDK5RAP3-234ENST00000584525 CTRB1P17538 263 aa10.04□□□□□ -0.8
CDK5RAP3-234ENST00000584525 VAMP1P23763 118 aa10.04□□□□□ -0.8
CDK5RAP3-234ENST00000584525 CNPY1Q3B7I2 92 aa10.04□□□□□ -0.8
CDK5RAP3-234ENST00000584525 CTRB2Q6GPI1 263 aa10.04□□□□□ -0.8
CDK5RAP3-234ENST00000584525 HAPLN4Q86UW8 402 aa10.04□□□□□ -0.8
CDK5RAP3-234ENST00000584525 FAM219AQ8IW50 185 aa10.04□□□□□ -0.8
CDK5RAP3-234ENST00000584525 CENPSQ8N2Z9 138 aa10.04□□□□□ -0.8
CDK5RAP3-234ENST00000584525 CXorf58Q96LI9 332 aa10.04□□□□□ -0.8
CDK5RAP3-234ENST00000584525 EDA2RQ9HAV5 297 aa10.04□□□□□ -0.8
CDK5RAP3-234ENST00000584525 E7EUB6 86 aa10.03□□□□□ -0.8
CDK5RAP3-234ENST00000584525 IGKV1-39P01597 117 aa10.03□□□□□ -0.8
CDK5RAP3-234ENST00000584525 IGKV1D-39P04432 117 aa10.03□□□□□ -0.8
CDK5RAP3-234ENST00000584525 CRYGCP07315 174 aa10.03□□□□□ -0.8
CDK5RAP3-234ENST00000584525 SNCAP37840 140 aa10.03□□□□□ -0.8
CDK5RAP3-234ENST00000584525 HSPE1P61604 102 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-234ENST00000584525 LGI3Q8N145 548 aa10.03□□□□□ -0.8
CDK5RAP3-234ENST00000584525 OR10W1Q8NGF6 305 aa10.03□□□□□ -0.8
CDK5RAP3-234ENST00000584525 NDUFA4L2Q9NRX3 87 aa10.03□□□□□ -0.8
CDK5RAP3-234ENST00000584525 TMEM14BQ9NUH8 114 aa10.03□□□□□ -0.8
CDK5RAP3-234ENST00000584525 TNCP24821 2201 aa10.03□□□□□ -0.8
CDK5RAP3-234ENST00000584525 CSMD3Q7Z407 3707 aa10.02□□□□□ -0.81
CDK5RAP3-234ENST00000584525 IGLC7A0M8Q6 106 aa10.02□□□□□ -0.81
CDK5RAP3-234ENST00000584525 CDS2O95674 445 aa10.02□□□□□ -0.81
CDK5RAP3-234ENST00000584525 IL7P13232 177 aa10.02□□□□□ -0.81
CDK5RAP3-234ENST00000584525 SUB1P53999 127 aaKnown RBP eCLIP10.02□□□□□ -0.81
CDK5RAP3-234ENST00000584525 PRCDQ00LT1 54 aa10.02□□□□□ -0.81
CDK5RAP3-234ENST00000584525 BAK1Q16611 211 aa10.02□□□□□ -0.81
CDK5RAP3-234ENST00000584525 TMEM128Q5BJH2 165 aa10.02□□□□□ -0.81
CDK5RAP3-234ENST00000584525 ZNF343Q6P1L6 599 aa10.02□□□□□ -0.81
CDK5RAP3-234ENST00000584525 C19orf35Q6ZS72 473 aa10.02□□□□□ -0.81
CDK5RAP3-234ENST00000584525 Q8N1Y9 231 aa10.02□□□□□ -0.81
CDK5RAP3-234ENST00000584525 IL22RA2Q969J5 263 aa10.02□□□□□ -0.81
CDK5RAP3-234ENST00000584525 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.02□□□□□ -0.81
CDK5RAP3-234ENST00000584525 PTTG2Q9NZH5 202 aa10.02□□□□□ -0.81
CDK5RAP3-234ENST00000584525 PEMTQ9UBM1 199 aa10.02□□□□□ -0.81
CDK5RAP3-234ENST00000584525 CACFD1Q9UGQ2 172 aa10.02□□□□□ -0.81
CDK5RAP3-234ENST00000584525 TRBV7-1A0A0A6YYK4 115 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 TRBV9A0A0B4J1U6 114 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 CEBPZOSA8MTT3 80 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 NDUFB8O95169 186 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 IGKV1-5P01602 117 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 IGHV3-23P01764 117 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 ARL3P36405 182 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 CCR6P51684 374 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 SPINK9Q5DT21 86 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 CLEC19AQ6UXS0 136 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 LINC00299Q6ZSB3 139 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 SELENOHQ8IZQ5 122 aaKnown RBP10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 UBAC2Q8NBM4 344 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 GLYATL2Q8WU03 294 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 MISP3Q96FF7 219 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 GALNT14Q96FL9 552 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 SPATA25Q9BR10 227 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 CCDC32Q9BV29 185 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 WDR12Q9GZL7 423 aaKnown RBP10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 C19orf73Q9NVV2 129 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 F11RQ9Y624 299 aaKnown RBP10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 S4R3C0 116 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 HYDINQ4G0P3 5121 aa10.01□□□□□ -0.81
CDK5RAP3-234ENST00000584525 IGLV11-55A0A075B6I3 123 aa10□□□□□ -0.81
CDK5RAP3-234ENST00000584525 A0A1B0GW64 132 aa10□□□□□ -0.81
CDK5RAP3-234ENST00000584525 A6NHS1 94 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms