RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 NACAE9PAV3 2078 aa6.38□□□□□ -1.39
NUP85-223ENST00000583877 IGHV3-21A0A0B4J1V1 117 aa6.37□□□□□ -1.39
NUP85-223ENST00000583877 C15orf62A8K5M9 175 aa6.37□□□□□ -1.39
NUP85-223ENST00000583877 DEFB4AO15263 64 aa6.37□□□□□ -1.39
NUP85-223ENST00000583877 TNFSF12O43508 249 aa6.37□□□□□ -1.39
NUP85-223ENST00000583877 FGF2P09038 288 aa6.37□□□□□ -1.39
NUP85-223ENST00000583877 CDNFQ49AH0 187 aa6.37□□□□□ -1.39
NUP85-223ENST00000583877 Q56UQ5 140 aa6.37□□□□□ -1.39
NUP85-223ENST00000583877 CT83Q5H943 113 aa6.37□□□□□ -1.39
NUP85-223ENST00000583877 CNIH2Q6PI25 160 aa6.37□□□□□ -1.39
NUP85-223ENST00000583877 GDPD1Q8N9F7 314 aa6.37□□□□□ -1.39
NUP85-223ENST00000583877 UBAC2Q8NBM4 344 aa6.37□□□□□ -1.39
NUP85-223ENST00000583877 TSPAN14Q8NG11 270 aa6.37□□□□□ -1.39
NUP85-223ENST00000583877 GPHA2Q96T91 129 aa6.37□□□□□ -1.39
NUP85-223ENST00000583877 RNF2Q99496 336 aa6.37□□□□□ -1.39
NUP85-223ENST00000583877 COMMD5Q9GZQ3 224 aa6.37□□□□□ -1.39
NUP85-223ENST00000583877 CCDC90BQ9GZT6 254 aa6.37□□□□□ -1.39
NUP85-223ENST00000583877 RSL24D1Q9UHA3 163 aaKnown RBP6.37□□□□□ -1.39
NUP85-223ENST00000583877 ELF5Q9UKW6 265 aaPredicted RBP6.37□□□□□ -1.39
NUP85-223ENST00000583877 UPK2O00526 184 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 RBFOX2O43251 390 aaKnown RBP eCLIP6.36□□□□□ -1.391e-8■□□□□ 10.4
NUP85-223ENST00000583877 MRPS14O60783 128 aaKnown RBP6.36□□□□□ -1.39
NUP85-223ENST00000583877 CA1P00915 261 aaPredicted RBP6.36□□□□□ -1.39
NUP85-223ENST00000583877 SERPINE2P07093 398 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 CLEC2LP0C7M8 214 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 MYL9P24844 172 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 OR10A3P58181 314 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 TAS2R31P59538 309 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 FABP5Q01469 135 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 TMEM187Q14656 261 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 MSMO1Q15800 293 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 POU2AF1Q16633 256 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 THOC7Q6I9Y2 204 aaKnown RBP6.36□□□□□ -1.39
NUP85-223ENST00000583877 HSD17B13Q7Z5P4 300 aaPredicted RBP6.36□□□□□ -1.39
NUP85-223ENST00000583877 NR2C2APQ86WQ0 139 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 SPAG16Q8N0X2 631 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 DMBX1Q8NFW5 382 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 OR10W1Q8NGF6 305 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 SECTM1Q8WVN6 248 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 CMTM3Q96MX0 182 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 CHRDL1Q9BU40 450 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 HINT2Q9BX68 163 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 QTRT1Q9BXR0 403 aaKnown RBP6.36□□□□□ -1.39
NUP85-223ENST00000583877 DCSTAMPQ9H295 470 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 ACOT13Q9NPJ3 140 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 SMPXQ9UHP9 88 aa6.36□□□□□ -1.39
NUP85-223ENST00000583877 IGHV4-4A0A075B6R2 117 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 IGHV3-49A0A0A0MS15 119 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 TRAV1-2A0A0B4J238 106 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 TRAV3A0A0B4J244 114 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 IGHV7-4-1A0A0J9YVY3 117 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 CCDC160A6NGH7 325 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 PRSS29PA6NIE9 313 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 IFITM5A6NNB3 132 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 C15orf61A6NNL5 157 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 CHEK1O14757 476 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 YIF1AO95070 293 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 OR13C7P0DN81 318 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 NQO2P16083 231 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 GNG2P59768 71 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 ARPC4P59998 168 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 WT1-ASQ06250 92 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 MLLT11Q13015 90 aaPredicted RBP6.35□□□□□ -1.39
NUP85-223ENST00000583877 CATR1Q13166 79 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 TOR2AQ5JU69 321 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 HACD4Q5VWC8 232 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 LINC00299Q6ZSB3 139 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 GBGT1Q8N5D6 347 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 Q8NAQ8 132 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 TMEM116Q8NCL8 245 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 SCARB1Q8WTV0 552 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 CNBD2Q96M20 576 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 RHPN1-AS1Q9BWJ2 59 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 CCL28Q9NRJ3 127 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 C21orf62Q9NYP8 219 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 TPRKBQ9Y3C4 175 aa6.35□□□□□ -1.39
NUP85-223ENST00000583877 LRP1BQ9NZR2 4599 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 IGHV3OR16-13A0A075B7E8 117 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 IGHV3-74A0A0B4J1X5 117 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 TRAV10A0A0B4J240 114 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 SULT1C2O00338 296 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 RTL8CO15255 209 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 RGS10O43665 173 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 NOL3O60936 208 aaKnown RBP6.34□□□□□ -1.39
NUP85-223ENST00000583877 HPRT1P00492 218 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 EIF4EP06730 217 aaKnown RBP6.34□□□□□ -1.39
NUP85-223ENST00000583877 CTSGP08311 255 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 TRAPPC2P0DI81 140 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 TRAPPC2BP0DI82 140 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 RAB3BP20337 219 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 HLA-DMBP28068 263 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 PAFAH1B2P68402 229 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 RELQ04864 619 aaPredicted RBP6.34□□□□□ -1.39
NUP85-223ENST00000583877 FAM90A2PQ658T7 463 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 PVRIGQ6DKI7 326 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 TEPPQ6URK8 271 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 GPR141Q7Z602 305 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 ZBTB34Q8NCN2 500 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 NUDCD2Q8WVJ2 157 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 OR10C1Q96KK4 312 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms