RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 SIGLEC9Q9Y336 463 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 C15orf62A8K5M9 175 aa10.03□□□□□ -0.8
SRSF1-204ENST00000581979 NBR2O15453 112 aa10.03□□□□□ -0.8
SRSF1-204ENST00000581979 ACTL6BO94805 426 aa10.03□□□□□ -0.8
SRSF1-204ENST00000581979 SCAF4O95104 1147 aaKnown RBP10.03□□□□□ -0.8
SRSF1-204ENST00000581979 BRS3P32247 399 aa10.03□□□□□ -0.8
SRSF1-204ENST00000581979 RAB11AP62491 216 aa10.03□□□□□ -0.8
SRSF1-204ENST00000581979 TNXAQ16473 311 aa10.03□□□□□ -0.8
SRSF1-204ENST00000581979 PRSS8Q16651 343 aa10.03□□□□□ -0.8
SRSF1-204ENST00000581979 FAM74A1Q5RGS3 127 aa10.03□□□□□ -0.8
SRSF1-204ENST00000581979 SLC25A24Q6NUK1 477 aa10.03□□□□□ -0.8
SRSF1-204ENST00000581979 STPG2Q8N412 459 aa10.03□□□□□ -0.8
SRSF1-204ENST00000581979 HSD17B11Q8NBQ5 300 aa10.03□□□□□ -0.8
SRSF1-204ENST00000581979 PCNPQ8WW12 178 aaKnown RBP10.03□□□□□ -0.8
SRSF1-204ENST00000581979 TMED6Q8WW62 240 aa10.03□□□□□ -0.8
SRSF1-204ENST00000581979 C22orf15Q8WYQ4 148 aa10.03□□□□□ -0.8
SRSF1-204ENST00000581979 NDUFA4L2Q9NRX3 87 aa10.03□□□□□ -0.8
SRSF1-204ENST00000581979 A0A1W2PN81 502 aa10.02□□□□□ -0.8
SRSF1-204ENST00000581979 PMS2P5A8MQ11 134 aa10.02□□□□□ -0.8
SRSF1-204ENST00000581979 RRHO14718 337 aa10.02□□□□□ -0.8
SRSF1-204ENST00000581979 FBXO24O75426 580 aa10.02□□□□□ -0.8
SRSF1-204ENST00000581979 IFNA5P01569 189 aa10.02□□□□□ -0.8
SRSF1-204ENST00000581979 TMEM11P17152 192 aa10.02□□□□□ -0.8
SRSF1-204ENST00000581979 MAS1LP35410 378 aa10.02□□□□□ -0.8
SRSF1-204ENST00000581979 CHRNA7P36544 502 aa10.02□□□□□ -0.8
SRSF1-204ENST00000581979 GNB1P62873 340 aa10.02□□□□□ -0.8
SRSF1-204ENST00000581979 PJVKQ0ZLH3 352 aa10.02□□□□□ -0.8
SRSF1-204ENST00000581979 CLLU1Q5K131 121 aa10.02□□□□□ -0.8
SRSF1-204ENST00000581979 BRD3OSQ6XYD6 125 aa10.02□□□□□ -0.8
SRSF1-204ENST00000581979 PPP1R27Q86WC6 154 aa10.02□□□□□ -0.8
SRSF1-204ENST00000581979 THNSL2Q86YJ6 484 aa10.02□□□□□ -0.8
SRSF1-204ENST00000581979 SLC24A4Q8NFF2 622 aa10.02□□□□□ -0.8
SRSF1-204ENST00000581979 PINX1Q96BK5 328 aaKnown RBP10.02□□□□□ -0.8
SRSF1-204ENST00000581979 AJUBAQ96IF1 538 aa10.02□□□□□ -0.8
SRSF1-204ENST00000581979 GINS3Q9BRX5 216 aa10.02□□□□□ -0.8
SRSF1-204ENST00000581979 ARV1Q9H2C2 271 aa10.02□□□□□ -0.8
SRSF1-204ENST00000581979 SLC25A32Q9H2D1 315 aa10.02□□□□□ -0.8
SRSF1-204ENST00000581979 FAM106CPP0CH98 169 aa10.02□□□□□ -0.81
SRSF1-204ENST00000581979 IGHV4-38-2P0DP08 117 aa10.02□□□□□ -0.81
SRSF1-204ENST00000581979 NPY1RP25929 384 aa10.02□□□□□ -0.81
SRSF1-204ENST00000581979 ERHP84090 104 aaKnown RBP10.02□□□□□ -0.81
SRSF1-204ENST00000581979 ATP6V1FQ16864 119 aa10.02□□□□□ -0.81
SRSF1-204ENST00000581979 MRGPRG-AS1Q2M3A8 158 aa10.02□□□□□ -0.81
SRSF1-204ENST00000581979 C10orf55Q5SWW7 151 aa10.02□□□□□ -0.81
SRSF1-204ENST00000581979 RBMS3Q6XE24 437 aaKnown RBP10.02□□□□□ -0.81
SRSF1-204ENST00000581979 ETV3LQ6ZN32 361 aa10.02□□□□□ -0.81
SRSF1-204ENST00000581979 C9orf139Q6ZV77 190 aa10.02□□□□□ -0.81
SRSF1-204ENST00000581979 SIGLECL1Q8N7X8 197 aa10.02□□□□□ -0.81
SRSF1-204ENST00000581979 NPBQ8NG41 125 aa10.02□□□□□ -0.81
SRSF1-204ENST00000581979 RPS10-NUDT3A0A1W2PQS6 291 aa10.01□□□□□ -0.81
SRSF1-204ENST00000581979 IFNA4P05014 189 aa10.01□□□□□ -0.81
SRSF1-204ENST00000581979 SNCAP37840 140 aa10.01□□□□□ -0.81
SRSF1-204ENST00000581979 RPL27AP46776 148 aaKnown RBP10.01□□□□□ -0.81
SRSF1-204ENST00000581979 EBI3Q14213 229 aa10.01□□□□□ -0.81
SRSF1-204ENST00000581979 OR10W1Q8NGF6 305 aa10.01□□□□□ -0.81
SRSF1-204ENST00000581979 SCGB1C1Q8TD33 95 aa10.01□□□□□ -0.81
SRSF1-204ENST00000581979 UBE2L5PA0A1B0GUS4 154 aa10□□□□□ -0.81
SRSF1-204ENST00000581979 E7EUB6 86 aa10□□□□□ -0.81
SRSF1-204ENST00000581979 NDUFA3O95167 84 aa10□□□□□ -0.81
SRSF1-204ENST00000581979 CA2P00918 260 aa10□□□□□ -0.81
SRSF1-204ENST00000581979 SEC11BP0C7V7 166 aa10□□□□□ -0.81
SRSF1-204ENST00000581979 FBLN7Q53RD9 439 aa10□□□□□ -0.81
SRSF1-204ENST00000581979 MRPL41Q8IXM3 137 aaKnown RBP10□□□□□ -0.81
SRSF1-204ENST00000581979 SLC7A5P1Q8MH63 180 aa10□□□□□ -0.81
SRSF1-204ENST00000581979 BCL6BQ8N143 479 aaPredicted RBP10□□□□□ -0.81
SRSF1-204ENST00000581979 RNF141Q8WVD5 230 aa10□□□□□ -0.81
SRSF1-204ENST00000581979 ZNF48Q96MX3 618 aaPredicted RBP10□□□□□ -0.81
SRSF1-204ENST00000581979 TMEM147Q9BVK8 224 aa10□□□□□ -0.81
SRSF1-204ENST00000581979 A0A0U1RQK1 487 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 CGB1A6NKQ9 187 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 NCBP2LA6PVI3 153 aaKnown RBP9.99□□□□□ -0.81
SRSF1-204ENST00000581979 INS-IGF2F8WCM5 200 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 SPP1P10451 314 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 ATP6V0CP27449 155 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 Q8N6K4 173 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 C3orf56Q8N813 242 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 LRRC20Q8TCA0 184 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 GNPNAT1Q96EK6 184 aaPredicted RBP9.99□□□□□ -0.81
SRSF1-204ENST00000581979 SH3BGRL3Q9H299 93 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 UQCC1Q9NVA1 299 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 FAM96BQ9Y3D0 163 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 DNAJC9-AS1A6NH13 148 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 CLDN34H7C241 214 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 FCN1O00602 326 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 CNIH1O95406 144 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 NMBP08949 121 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 ATP5IP56385 69 aaPredicted RBP9.99□□□□□ -0.81
SRSF1-204ENST00000581979 RUNX1Q01196 453 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 C5orf64Q2M2E5 130 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 LRRC75BQ2VPJ9 315 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 TMEM170AQ8WVE7 144 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 C1RLQ9NZP8 487 aa9.99□□□□□ -0.81
SRSF1-204ENST00000581979 A0A1B0GW64 132 aa9.98□□□□□ -0.81
SRSF1-204ENST00000581979 OR13C7P0DN81 318 aa9.98□□□□□ -0.81
SRSF1-204ENST00000581979 RNASE2P10153 161 aaKnown RBP9.98□□□□□ -0.81
SRSF1-204ENST00000581979 SUB1P53999 127 aaKnown RBP eCLIP9.98□□□□□ -0.813e-12■■■□□ 15.2
SRSF1-204ENST00000581979 WT1-ASQ06250 92 aa9.98□□□□□ -0.81
SRSF1-204ENST00000581979 C2orf83Q53S99 150 aa9.98□□□□□ -0.81
SRSF1-204ENST00000581979 AWAT1Q58HT5 328 aa9.98□□□□□ -0.81
SRSF1-204ENST00000581979 TMEM182Q6ZP80 229 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms