RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 TMEM218A2RU14 115 aa11.74□□□□□ -0.53
MKS1-211ENST00000581761 OOSP1A8MZH6 123 aa11.74□□□□□ -0.53
MKS1-211ENST00000581761 VWC2LB2RUY7 222 aa11.74□□□□□ -0.53
MKS1-211ENST00000581761 INS-IGF2F8WCM5 200 aa11.74□□□□□ -0.53
MKS1-211ENST00000581761 VENTXO95231 258 aa11.74□□□□□ -0.53
MKS1-211ENST00000581761 MDKP21741 143 aaPredicted RBP11.74□□□□□ -0.53
MKS1-211ENST00000581761 MAS1LP35410 378 aa11.74□□□□□ -0.53
MKS1-211ENST00000581761 GUK1Q16774 197 aa11.74□□□□□ -0.53
MKS1-211ENST00000581761 MRGPRG-AS1Q2M3A8 158 aa11.74□□□□□ -0.53
MKS1-211ENST00000581761 TUSC1Q2TAM9 212 aa11.74□□□□□ -0.53
MKS1-211ENST00000581761 FFAR4Q5NUL3 377 aa11.74□□□□□ -0.53
MKS1-211ENST00000581761 ACSM6Q6P461 480 aa11.74□□□□□ -0.53
MKS1-211ENST00000581761 SPSB3Q6PJ21 355 aa11.74□□□□□ -0.53
MKS1-211ENST00000581761 KRTAP1-3Q8IUG1 177 aa11.74□□□□□ -0.53
MKS1-211ENST00000581761 CFHR4Q92496 578 aa11.74□□□□□ -0.53
MKS1-211ENST00000581761 RPRMQ9NS64 109 aa11.74□□□□□ -0.53
MKS1-211ENST00000581761 SIGLEC9Q9Y336 463 aa11.74□□□□□ -0.53
MKS1-211ENST00000581761 IGHV4-30-2A0A087WSY4 118 aa11.73□□□□□ -0.53
MKS1-211ENST00000581761 BTBD17A6NE02 478 aa11.73□□□□□ -0.53
MKS1-211ENST00000581761 CGB1A6NKQ9 187 aa11.73□□□□□ -0.53
MKS1-211ENST00000581761 ACTL6BO94805 426 aa11.73□□□□□ -0.53
MKS1-211ENST00000581761 MBP02144 154 aa11.73□□□□□ -0.53
MKS1-211ENST00000581761 RPL27AP46776 148 aaKnown RBP11.73□□□□□ -0.53
MKS1-211ENST00000581761 PLGLAQ15195 96 aa11.73□□□□□ -0.53
MKS1-211ENST00000581761 SSX2Q16385 188 aa11.73□□□□□ -0.53
MKS1-211ENST00000581761 TNXAQ16473 311 aa11.73□□□□□ -0.53
MKS1-211ENST00000581761 BSXQ3C1V8 233 aa11.73□□□□□ -0.53
MKS1-211ENST00000581761 CCDC144NLQ6NUI1 221 aa11.73□□□□□ -0.53
MKS1-211ENST00000581761 TREML4Q6UXN2 200 aa11.73□□□□□ -0.53
MKS1-211ENST00000581761 MRPL41Q8IXM3 137 aaKnown RBP11.73□□□□□ -0.53
MKS1-211ENST00000581761 SFT2D1Q8WV19 159 aa11.73□□□□□ -0.53
MKS1-211ENST00000581761 PBDC1Q9BVG4 233 aa11.73□□□□□ -0.53
MKS1-211ENST00000581761 FBXL15Q9H469 300 aa11.73□□□□□ -0.53
MKS1-211ENST00000581761 BEX4Q9NWD9 120 aaPredicted RBP11.73□□□□□ -0.53
MKS1-211ENST00000581761 POLR3KQ9Y2Y1 108 aaPredicted RBP11.73□□□□□ -0.53
MKS1-211ENST00000581761 TBL2Q9Y4P3 447 aaKnown RBP11.73□□□□□ -0.53
MKS1-211ENST00000581761 E7EUB6 86 aa11.72□□□□□ -0.53
MKS1-211ENST00000581761 MPDU1O75352 247 aa11.72□□□□□ -0.53
MKS1-211ENST00000581761 IGKV1D-33P01593 117 aa11.72□□□□□ -0.53
MKS1-211ENST00000581761 IGKV1-33P01594 117 aa11.72□□□□□ -0.53
MKS1-211ENST00000581761 CD5P06127 495 aa11.72□□□□□ -0.53
MKS1-211ENST00000581761 PAX1P15863 534 aa11.72□□□□□ -0.53
MKS1-211ENST00000581761 UBE2E1P51965 193 aa11.72□□□□□ -0.53
MKS1-211ENST00000581761 SUB1P53999 127 aaKnown RBP eCLIP11.72□□□□□ -0.53
MKS1-211ENST00000581761 DSCR9P59020 149 aa11.72□□□□□ -0.53
MKS1-211ENST00000581761 GNB1P62873 340 aa11.72□□□□□ -0.53
MKS1-211ENST00000581761 CCL20P78556 96 aa11.72□□□□□ -0.53
MKS1-211ENST00000581761 HABP2Q14520 560 aaPredicted RBP11.72□□□□□ -0.53
MKS1-211ENST00000581761 PEA15Q15121 130 aa11.72□□□□□ -0.53
MKS1-211ENST00000581761 ARSJQ5FYB0 599 aaPredicted RBP11.72□□□□□ -0.53
MKS1-211ENST00000581761 NPVFQ9HCQ7 196 aa11.72□□□□□ -0.53
MKS1-211ENST00000581761 ACANP16112 2415 aa11.72□□□□□ -0.53
MKS1-211ENST00000581761 A0A1B0GW64 132 aa11.71□□□□□ -0.53
MKS1-211ENST00000581761 FNDC10F2Z333 226 aa11.71□□□□□ -0.53
MKS1-211ENST00000581761 F8W036 122 aa11.71□□□□□ -0.53
MKS1-211ENST00000581761 MOSP00540 346 aa11.71□□□□□ -0.53
MKS1-211ENST00000581761 APOC3P02656 99 aa11.71□□□□□ -0.53
MKS1-211ENST00000581761 OR13C7P0DN81 318 aa11.71□□□□□ -0.53
MKS1-211ENST00000581761 CD99P14209 185 aa11.71□□□□□ -0.53
MKS1-211ENST00000581761 PAX6P26367 422 aa11.71□□□□□ -0.53
MKS1-211ENST00000581761 WT1-ASQ06250 92 aa11.71□□□□□ -0.53
MKS1-211ENST00000581761 HES1Q14469 280 aa11.71□□□□□ -0.53
MKS1-211ENST00000581761 MMDQ15546 238 aa11.71□□□□□ -0.53
MKS1-211ENST00000581761 ZNF726P1Q15940 193 aa11.71□□□□□ -0.53
MKS1-211ENST00000581761 ACOT6Q3I5F7 207 aaPredicted RBP11.71□□□□□ -0.53
MKS1-211ENST00000581761 LCN15Q6UWW0 184 aa11.71□□□□□ -0.53
MKS1-211ENST00000581761 DYNAPQ8N1N2 210 aa11.71□□□□□ -0.53
MKS1-211ENST00000581761 OR2T10Q8NGZ9 312 aa11.71□□□□□ -0.53
MKS1-211ENST00000581761 MBD3L1Q8WWY6 194 aa11.71□□□□□ -0.53
MKS1-211ENST00000581761 RCC1LQ96I51 464 aaKnown RBP11.71□□□□□ -0.53
MKS1-211ENST00000581761 MGST2Q99735 147 aa11.71□□□□□ -0.53
MKS1-211ENST00000581761 EIF5A2Q9GZV4 153 aaKnown RBP11.71□□□□□ -0.53
MKS1-211ENST00000581761 KIAA1456Q9P272 454 aa11.71□□□□□ -0.53
MKS1-211ENST00000581761 TNCP24821 2201 aa11.7□□□□□ -0.54
MKS1-211ENST00000581761 TRAV1-1A0A0B4J248 108 aa11.7□□□□□ -0.54
MKS1-211ENST00000581761 MAP1LC3B2A6NCE7 125 aa11.7□□□□□ -0.54
MKS1-211ENST00000581761 NBR2O15453 112 aa11.7□□□□□ -0.54
MKS1-211ENST00000581761 SOX15O60248 233 aa11.7□□□□□ -0.54
MKS1-211ENST00000581761 SNRNP70P08621 437 aaKnown RBP11.7□□□□□ -0.54
MKS1-211ENST00000581761 COMPP49747 757 aaPredicted RBP11.7□□□□□ -0.54
MKS1-211ENST00000581761 FAM122CQ6P4D5 195 aa11.7□□□□□ -0.54
MKS1-211ENST00000581761 SSX7Q7RTT5 188 aa11.7□□□□□ -0.54
MKS1-211ENST00000581761 PPP1R27Q86WC6 154 aa11.7□□□□□ -0.54
MKS1-211ENST00000581761 OR10G4Q8NGN3 311 aa11.7□□□□□ -0.54
MKS1-211ENST00000581761 OR10G9Q8NGN4 311 aa11.7□□□□□ -0.54
MKS1-211ENST00000581761 OR10G7Q8NGN6 311 aa11.7□□□□□ -0.54
MKS1-211ENST00000581761 C17orf50Q8WW18 174 aa11.7□□□□□ -0.54
MKS1-211ENST00000581761 EAF1Q96JC9 268 aaPredicted RBP11.7□□□□□ -0.54
MKS1-211ENST00000581761 ACTR3CQ9C0K3 210 aaPredicted RBP11.7□□□□□ -0.54
MKS1-211ENST00000581761 MAP1LC3BQ9GZQ8 125 aa11.7□□□□□ -0.54
MKS1-211ENST00000581761 KCNIP2Q9NS61 270 aa11.7□□□□□ -0.54
MKS1-211ENST00000581761 SLC39A9Q9NUM3 307 aa11.7□□□□□ -0.54
MKS1-211ENST00000581761 CTXND1A0A1B0GTU2 59 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 C9JQL5 133 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 SCO1O75880 301 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 REG1AP05451 166 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 SFTA3P0C7M3 94 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 ADCYAP1P18509 176 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 CD24P25063 80 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 OPRK1P41145 380 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms