RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 LGI3Q8N145 548 aa7.73□□□□□ -1.17
MKS1-208ENST00000579358 OR2C3Q8N628 320 aa7.73□□□□□ -1.17
MKS1-208ENST00000579358 SLC35G3Q8N808 338 aa7.73□□□□□ -1.17
MKS1-208ENST00000579358 LRTM2Q8N967 370 aa7.73□□□□□ -1.17
MKS1-208ENST00000579358 ZNF114Q8NC26 417 aa7.73□□□□□ -1.17
MKS1-208ENST00000579358 CXorf58Q96LI9 332 aa7.73□□□□□ -1.17
MKS1-208ENST00000579358 PDCD10Q9BUL8 212 aa7.73□□□□□ -1.17
MKS1-208ENST00000579358 PLEKHA3Q9HB20 300 aa7.73□□□□□ -1.17
MKS1-208ENST00000579358 SHPKQ9UHJ6 478 aa7.73□□□□□ -1.17
MKS1-208ENST00000579358 MGAM2Q2M2H8 2515 aa7.73□□□□□ -1.17
MKS1-208ENST00000579358 TRBV7-1A0A0A6YYK4 115 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 LINC00854A0A1B0GVQ3 168 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 ANKRD34BA5PLL1 514 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 OVOL1O14753 267 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 PLA2G10O15496 165 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 ST8SIA3O43173 380 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 NDUFB8O95169 186 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 SFT2D2O95562 160 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 VAMP1P23763 118 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 HOXD3P31249 432 aaPredicted RBP7.72□□□□□ -1.17
MKS1-208ENST00000579358 INSL3P51460 131 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 MECP2P51608 486 aaKnown RBP7.72□□□□□ -1.17
MKS1-208ENST00000579358 SLURP1P55000 103 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 PPP1R1AQ13522 171 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 ZNF846Q147U1 533 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 PDLIM3Q53GG5 364 aaPredicted RBP7.72□□□□□ -1.17
MKS1-208ENST00000579358 NMSQ5H8A3 153 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 C9orf66Q5T8R8 295 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 Q6ZRM9 215 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 C1QL4Q86Z23 238 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 OR1P1Q8NH06 330 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 OR52E5Q8NH55 327 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 DCUN1D4Q92564 292 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 DLX4Q92988 240 aaPredicted RBP7.72□□□□□ -1.17
MKS1-208ENST00000579358 EEF1AKMT3Q96AZ1 226 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 GPR146Q96CH1 333 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.72□□□□□ -1.17
MKS1-208ENST00000579358 DMRT1Q9Y5R6 373 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 PLXNB1O43157 2135 aa7.72□□□□□ -1.17
MKS1-208ENST00000579358 WNK1Q9H4A3 2382 aa7.71□□□□□ -1.17
MKS1-208ENST00000579358 IFNA17P01571 189 aa7.71□□□□□ -1.18
MKS1-208ENST00000579358 TRBV12-3P01733 135 aa7.71□□□□□ -1.18
MKS1-208ENST00000579358 SULT1A3P0DMM9 295 aa7.71□□□□□ -1.18
MKS1-208ENST00000579358 SULT1A4P0DMN0 295 aa7.71□□□□□ -1.18
MKS1-208ENST00000579358 SPCS3P61009 180 aa7.71□□□□□ -1.18
MKS1-208ENST00000579358 ERHP84090 104 aaKnown RBP7.71□□□□□ -1.18
MKS1-208ENST00000579358 EGFEM1PQ0D2K5 195 aa7.71□□□□□ -1.18
MKS1-208ENST00000579358 RPEL1Q2QD12 228 aa7.71□□□□□ -1.18
MKS1-208ENST00000579358 SLC25A24Q6NUK1 477 aa7.71□□□□□ -1.18
MKS1-208ENST00000579358 VN1R17PQ8TDU5 208 aa7.71□□□□□ -1.18
MKS1-208ENST00000579358 CCDC140Q96MF4 163 aa7.71□□□□□ -1.18
MKS1-208ENST00000579358 ATP6V0BQ99437 205 aa7.71□□□□□ -1.18
MKS1-208ENST00000579358 PRR13Q9NZ81 148 aa7.71□□□□□ -1.18
MKS1-208ENST00000579358 ZMAT5Q9UDW3 170 aaKnown RBP7.71□□□□□ -1.18
MKS1-208ENST00000579358 CACNG5Q9UF02 275 aa7.71□□□□□ -1.18
MKS1-208ENST00000579358 A0A1B0GU03 582 aa7.7□□□□□ -1.18
MKS1-208ENST00000579358 MFSD2BA6NFX1 497 aa7.7□□□□□ -1.18
MKS1-208ENST00000579358 SEC14L6B5MCN3 397 aa7.7□□□□□ -1.18
MKS1-208ENST00000579358 BMPR1BO00238 502 aa7.7□□□□□ -1.18
MKS1-208ENST00000579358 UPK1BO75841 260 aa7.7□□□□□ -1.18
MKS1-208ENST00000579358 SLC25A6P12236 298 aa7.7□□□□□ -1.18
MKS1-208ENST00000579358 HOXA1P49639 335 aaPredicted RBP7.7□□□□□ -1.18
MKS1-208ENST00000579358 MFAP2P55001 183 aa7.7□□□□□ -1.18
MKS1-208ENST00000579358 DEFA6Q01524 100 aa7.7□□□□□ -1.18
MKS1-208ENST00000579358 KLF5Q13887 457 aaPredicted RBP7.7□□□□□ -1.18
MKS1-208ENST00000579358 SMCO1Q147U7 214 aa7.7□□□□□ -1.18
MKS1-208ENST00000579358 ANKRD55Q3KP44 614 aa7.7□□□□□ -1.18
MKS1-208ENST00000579358 ACSM6Q6P461 480 aa7.7□□□□□ -1.18
MKS1-208ENST00000579358 REC114Q7Z4M0 266 aa7.7□□□□□ -1.18
MKS1-208ENST00000579358 LYZL2Q7Z4W2 148 aa7.7□□□□□ -1.18
MKS1-208ENST00000579358 ZNF502Q8TBZ5 544 aa7.7□□□□□ -1.18
MKS1-208ENST00000579358 C20orf85Q9H1P6 137 aa7.7□□□□□ -1.18
MKS1-208ENST00000579358 ENY2Q9NPA8 101 aa7.7□□□□□ -1.18
MKS1-208ENST00000579358 FLVCR2Q9UPI3 526 aa7.7□□□□□ -1.18
MKS1-208ENST00000579358 TNCP24821 2201 aa7.7□□□□□ -1.18
MKS1-208ENST00000579358 VWFP04275 2813 aa7.69□□□□□ -1.18
MKS1-208ENST00000579358 C9orf170A2RU37 121 aa7.69□□□□□ -1.18
MKS1-208ENST00000579358 K7EIM0 57 aa7.69□□□□□ -1.18
MKS1-208ENST00000579358 CORTO00230 105 aa7.69□□□□□ -1.18
MKS1-208ENST00000579358 GGCTO75223 188 aaKnown RBP7.69□□□□□ -1.18
MKS1-208ENST00000579358 HLA-AP01891 365 aaKnown RBP7.69□□□□□ -1.18
MKS1-208ENST00000579358 TCRBP04435 133 aa7.69□□□□□ -1.18
MKS1-208ENST00000579358 OR4E1P0C645 316 aa7.69□□□□□ -1.18
MKS1-208ENST00000579358 SNCAP37840 140 aa7.69□□□□□ -1.18
MKS1-208ENST00000579358 ASAH1Q13510 395 aa7.69□□□□□ -1.18
MKS1-208ENST00000579358 TATDN3Q17R31 274 aa7.69□□□□□ -1.18
MKS1-208ENST00000579358 BSXQ3C1V8 233 aa7.69□□□□□ -1.18
MKS1-208ENST00000579358 SPINK9Q5DT21 86 aa7.69□□□□□ -1.18
MKS1-208ENST00000579358 PVRIGQ6DKI7 326 aa7.69□□□□□ -1.18
MKS1-208ENST00000579358 MZT2BQ6NZ67 158 aa7.69□□□□□ -1.18
MKS1-208ENST00000579358 LYG2Q86SG7 212 aa7.69□□□□□ -1.18
MKS1-208ENST00000579358 TBC1D24Q9ULP9 559 aa7.69□□□□□ -1.18
MKS1-208ENST00000579358 TMED3Q9Y3Q3 217 aa7.69□□□□□ -1.18
MKS1-208ENST00000579358 SAP30O75446 220 aa7.68□□□□□ -1.18
MKS1-208ENST00000579358 IGHV3-23P01764 117 aa7.68□□□□□ -1.18
MKS1-208ENST00000579358 RNASE2P10153 161 aaKnown RBP7.68□□□□□ -1.18
MKS1-208ENST00000579358 ANXA7P20073 488 aaKnown RBP7.68□□□□□ -1.18
MKS1-208ENST00000579358 ARL3P36405 182 aa7.68□□□□□ -1.18
MKS1-208ENST00000579358 SUB1P53999 127 aaKnown RBP eCLIP7.68□□□□□ -1.18
MKS1-208ENST00000579358 SYNJ2BPP57105 145 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms