RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 SCARB1Q8WTV0 552 aa6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 TMEM190Q8WZ59 177 aa6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 SLC25A46Q96AG3 418 aa6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 MISP3Q96FF7 219 aa6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 TSC22D3Q99576 134 aa6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 BCL7BQ9BQE9 202 aa6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 DAZ1Q9NQZ3 744 aaKnown RBP6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 NDUFA4L2Q9NRX3 87 aa6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 FKBP11Q9NYL4 201 aa6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 PRNDQ9UKY0 176 aa6.88□□□□□ -1.31
CDK5RAP3-211ENST00000578996 DBX1A6NMT0 343 aa6.87□□□□□ -1.31
CDK5RAP3-211ENST00000578996 C15orf61A6NNL5 157 aa6.87□□□□□ -1.31
CDK5RAP3-211ENST00000578996 NDUFA4O00483 81 aa6.87□□□□□ -1.31
CDK5RAP3-211ENST00000578996 YIF1AO95070 293 aa6.87□□□□□ -1.31
CDK5RAP3-211ENST00000578996 C8orf88P0DMB2 117 aa6.87□□□□□ -1.31
CDK5RAP3-211ENST00000578996 NAT1P18440 290 aa6.87□□□□□ -1.31
CDK5RAP3-211ENST00000578996 VBP1P61758 197 aa6.87□□□□□ -1.31
CDK5RAP3-211ENST00000578996 LPCAT3Q6P1A2 487 aa6.87□□□□□ -1.31
CDK5RAP3-211ENST00000578996 SPSB3Q6PJ21 355 aa6.87□□□□□ -1.31
CDK5RAP3-211ENST00000578996 H2BFWTQ7Z2G1 175 aa6.87□□□□□ -1.31
CDK5RAP3-211ENST00000578996 GPR141Q7Z602 305 aa6.87□□□□□ -1.31
CDK5RAP3-211ENST00000578996 LYSMD2Q8IV50 215 aa6.87□□□□□ -1.31
CDK5RAP3-211ENST00000578996 OR5B3Q8NH48 314 aa6.87□□□□□ -1.31
CDK5RAP3-211ENST00000578996 OR4A16Q8NH70 328 aa6.87□□□□□ -1.31
CDK5RAP3-211ENST00000578996 PINX1Q96BK5 328 aaKnown RBP6.87□□□□□ -1.31
CDK5RAP3-211ENST00000578996 SPAG8Q99932 426 aaPredicted RBP6.87□□□□□ -1.31
CDK5RAP3-211ENST00000578996 OVOL2Q9BRP0 275 aa6.87□□□□□ -1.31
CDK5RAP3-211ENST00000578996 CHRDL1Q9BU40 450 aa6.87□□□□□ -1.31
CDK5RAP3-211ENST00000578996 C5orf66Q9H5L9 145 aa6.87□□□□□ -1.31
CDK5RAP3-211ENST00000578996 IGKV3-7A0A075B6H7 116 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 IGHV3-49A0A0A0MS15 119 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 CXorf65A6NEN9 183 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 FAM25AB3EWG3 89 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 FAM25CB3EWG5 89 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 FAM25GB3EWG6 89 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 K7EIM0 57 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 M0QYG6 137 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 TSPAN4O14817 238 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 NUPL2O15504 423 aaKnown RBP6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 HPGDSO60760 199 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 IGHV3-48P01763 117 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 PGAM2P15259 253 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 RPL35AP18077 110 aaKnown RBP6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 RCVRNP35243 200 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 TFPI2P48307 235 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 APOC4P55056 127 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 TMBIM6P55061 237 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 DEFB135Q30KP9 77 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 SPINK9Q5DT21 86 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 GPX8Q8TED1 209 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 MRGPRFQ96AM1 343 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 FUNDC2Q9BWH2 189 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 TMEM14BQ9NUH8 114 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 HYDINQ4G0P3 5121 aa6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 EPPK1P58107 5090 aaKnown RBP6.86□□□□□ -1.31
CDK5RAP3-211ENST00000578996 A0A0J9YWU9 116 aa6.85□□□□□ -1.31
CDK5RAP3-211ENST00000578996 OR4C46A6NHA9 309 aa6.85□□□□□ -1.31
CDK5RAP3-211ENST00000578996 F8W735 103 aaPredicted RBP6.85□□□□□ -1.31
CDK5RAP3-211ENST00000578996 SPRY2O43597 315 aa6.85□□□□□ -1.31
CDK5RAP3-211ENST00000578996 APOA1P02647 267 aa6.85□□□□□ -1.31
CDK5RAP3-211ENST00000578996 CTSDP07339 412 aaPredicted RBP6.85□□□□□ -1.31
CDK5RAP3-211ENST00000578996 ELK1P19419 428 aa6.85□□□□□ -1.31
CDK5RAP3-211ENST00000578996 ADMP35318 185 aa6.85□□□□□ -1.31
CDK5RAP3-211ENST00000578996 RELQ04864 619 aaPredicted RBP6.85□□□□□ -1.31
CDK5RAP3-211ENST00000578996 ODF3L2Q3SX64 289 aa6.85□□□□□ -1.31
CDK5RAP3-211ENST00000578996 OR1P1Q8NH06 330 aa6.85□□□□□ -1.31
CDK5RAP3-211ENST00000578996 SCPEP1Q9HB40 452 aa6.85□□□□□ -1.31
CDK5RAP3-211ENST00000578996 PTTG2Q9NZH5 202 aa6.85□□□□□ -1.31
CDK5RAP3-211ENST00000578996 RSL24D1Q9UHA3 163 aaKnown RBP6.85□□□□□ -1.31
CDK5RAP3-211ENST00000578996 IGHV3OR16-13A0A075B7E8 117 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 IGHV3-74A0A0B4J1X5 117 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 C15orf62A8K5M9 175 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 K7EMT4 169 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 GNG7O60262 68 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 MT-CO2P00403 227 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 IGKV1-39P01597 117 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 IGKV1D-39P04432 117 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 CTSGP08311 255 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 PI3P19957 117 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 BMI1P35226 326 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 RORCP51449 518 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 AKR1C2P52895 323 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 MFAP4P55083 255 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 ERHP84090 104 aaKnown RBP6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 PRCDQ00LT1 54 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 IZUMO4Q1ZYL8 232 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 CNPY1Q3B7I2 92 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 MZT2AQ6P582 158 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 LYG2Q86SG7 212 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 APRG1Q8IVJ8 170 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 STPG3Q8N7X2 389 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 TMEM116Q8NCL8 245 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 RAB2BQ8WUD1 216 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 SEC22AQ96IW7 307 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 ATP6V0BQ99437 205 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 RNF2Q99496 336 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 PDCD10Q9BUL8 212 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 RHPN1-AS1Q9BWJ2 59 aa6.84□□□□□ -1.31
CDK5RAP3-211ENST00000578996 TRAV14DV4A0A0A6YYC5 116 aa6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 IGHV7-4-1A0A0J9YVY3 117 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms