RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 LRTM2Q8N967 370 aa11.9□□□□□ -0.5
IFT20-208ENST00000578985 WFDC9Q8NEX5 89 aa11.9□□□□□ -0.5
IFT20-208ENST00000578985 PLEKHA3Q9HB20 300 aa11.9□□□□□ -0.5
IFT20-208ENST00000578985 KLK9Q9UKQ9 250 aa11.9□□□□□ -0.5
IFT20-208ENST00000578985 IGLV11-55A0A075B6I3 123 aa11.89□□□□□ -0.51
IFT20-208ENST00000578985 TRAV6A0A075B6T7 132 aa11.89□□□□□ -0.51
IFT20-208ENST00000578985 ANKRD34BA5PLL1 514 aa11.89□□□□□ -0.51
IFT20-208ENST00000578985 CYB5BO43169 146 aa11.89□□□□□ -0.51
IFT20-208ENST00000578985 NDUFB8O95169 186 aa11.89□□□□□ -0.51
IFT20-208ENST00000578985 HLA-AP01891 365 aaKnown RBP11.89□□□□□ -0.51
IFT20-208ENST00000578985 HSPB1P04792 205 aaKnown RBP11.89□□□□□ -0.51
IFT20-208ENST00000578985 H2AFB2P0C5Z0 115 aa11.89□□□□□ -0.51
IFT20-208ENST00000578985 SULT1A3P0DMM9 295 aa11.89□□□□□ -0.51
IFT20-208ENST00000578985 SULT1A4P0DMN0 295 aa11.89□□□□□ -0.51
IFT20-208ENST00000578985 DHRS2Q13268 280 aa11.89□□□□□ -0.51
IFT20-208ENST00000578985 FHL3Q13643 280 aa11.89□□□□□ -0.51
IFT20-208ENST00000578985 C15orf32Q32M92 178 aa11.89□□□□□ -0.51
IFT20-208ENST00000578985 AARDQ4LEZ3 155 aa11.89□□□□□ -0.51
IFT20-208ENST00000578985 NMSQ5H8A3 153 aa11.89□□□□□ -0.51
IFT20-208ENST00000578985 ZNF343Q6P1L6 599 aa11.89□□□□□ -0.51
IFT20-208ENST00000578985 OR2C3Q8N628 320 aa11.89□□□□□ -0.51
IFT20-208ENST00000578985 OR52E5Q8NH55 327 aa11.89□□□□□ -0.51
IFT20-208ENST00000578985 NUDT15Q9NV35 164 aa11.89□□□□□ -0.51
IFT20-208ENST00000578985 F11RQ9Y624 299 aaKnown RBP11.89□□□□□ -0.51
IFT20-208ENST00000578985 IGHV4OR15-8A0A075B7B6 117 aa11.88□□□□□ -0.51
IFT20-208ENST00000578985 A0A087WW49 117 aa11.88□□□□□ -0.51
IFT20-208ENST00000578985 LINC01619G3V211 115 aa11.88□□□□□ -0.51
IFT20-208ENST00000578985 OR8U8P0C7N1 319 aa11.88□□□□□ -0.51
IFT20-208ENST00000578985 DEFA1P59665 94 aa11.88□□□□□ -0.51
IFT20-208ENST00000578985 DEFA3P59666 94 aa11.88□□□□□ -0.51
IFT20-208ENST00000578985 SPCS3P61009 180 aa11.88□□□□□ -0.51
IFT20-208ENST00000578985 ERHP84090 104 aaKnown RBP11.88□□□□□ -0.51
IFT20-208ENST00000578985 EXOSC2Q13868 293 aaKnown RBP11.88□□□□□ -0.51
IFT20-208ENST00000578985 SMCO1Q147U7 214 aa11.88□□□□□ -0.51
IFT20-208ENST00000578985 SLC25A24Q6NUK1 477 aa11.88□□□□□ -0.51
IFT20-208ENST00000578985 COQ8AQ8NI60 647 aa11.88□□□□□ -0.51
IFT20-208ENST00000578985 ENKURQ8TC29 256 aa11.88□□□□□ -0.51
IFT20-208ENST00000578985 ENY2Q9NPA8 101 aa11.88□□□□□ -0.51
IFT20-208ENST00000578985 DMRT1Q9Y5R6 373 aa11.88□□□□□ -0.51
IFT20-208ENST00000578985 NOTCH3Q9UM47 2321 aa11.88□□□□□ -0.51
IFT20-208ENST00000578985 MGAM2Q2M2H8 2515 aa11.87□□□□□ -0.51
IFT20-208ENST00000578985 A0A1B0GU03 582 aa11.87□□□□□ -0.51
IFT20-208ENST00000578985 INS-IGF2F8WCM5 200 aa11.87□□□□□ -0.51
IFT20-208ENST00000578985 DUS4LO95620 317 aaKnown RBP11.87□□□□□ -0.51
IFT20-208ENST00000578985 HOXB5P09067 269 aa11.87□□□□□ -0.51
IFT20-208ENST00000578985 HOXA1P49639 335 aaPredicted RBP11.87□□□□□ -0.51
IFT20-208ENST00000578985 MFAP2P55001 183 aa11.87□□□□□ -0.51
IFT20-208ENST00000578985 OR1L6Q8NGR2 347 aa11.87□□□□□ -0.51
IFT20-208ENST00000578985 RANGRFQ9HD47 186 aaPredicted RBP11.87□□□□□ -0.51
IFT20-208ENST00000578985 THYN1Q9P016 225 aa11.87□□□□□ -0.51
IFT20-208ENST00000578985 PEF1Q9UBV8 284 aaKnown RBP11.87□□□□□ -0.51
IFT20-208ENST00000578985 CACFD1Q9UGQ2 172 aa11.87□□□□□ -0.51
IFT20-208ENST00000578985 TMED3Q9Y3Q3 217 aa11.87□□□□□ -0.51
IFT20-208ENST00000578985 GGNBP1Q5YKI7 109 aa11.86□□□□□ -0.51
IFT20-208ENST00000578985 OR52B4Q8NGK2 314 aa11.86□□□□□ -0.51
IFT20-208ENST00000578985 OR1P1Q8NH06 330 aa11.86□□□□□ -0.51
IFT20-208ENST00000578985 OR1S1Q8NH92 325 aa11.86□□□□□ -0.51
IFT20-208ENST00000578985 EEF1AKMT3Q96AZ1 226 aa11.86□□□□□ -0.51
IFT20-208ENST00000578985 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.85□□□□□ -0.51
IFT20-208ENST00000578985 CEBPZOSA8MTT3 80 aa11.85□□□□□ -0.51
IFT20-208ENST00000578985 NXPH3O95157 252 aa11.85□□□□□ -0.51
IFT20-208ENST00000578985 TRBV12-3P01733 135 aa11.85□□□□□ -0.51
IFT20-208ENST00000578985 IGHV3-23P01764 117 aa11.85□□□□□ -0.51
IFT20-208ENST00000578985 SLC25A6P12236 298 aa11.85□□□□□ -0.51
IFT20-208ENST00000578985 ZP3P21754 424 aa11.85□□□□□ -0.51
IFT20-208ENST00000578985 SNCAP37840 140 aa11.85□□□□□ -0.51
IFT20-208ENST00000578985 SLURP1P55000 103 aa11.85□□□□□ -0.51
IFT20-208ENST00000578985 PDLIM3Q53GG5 364 aaPredicted RBP11.85□□□□□ -0.51
IFT20-208ENST00000578985 FAM209BQ5JX69 171 aa11.85□□□□□ -0.51
IFT20-208ENST00000578985 NRARPQ7Z6K4 114 aa11.85□□□□□ -0.51
IFT20-208ENST00000578985 ZNF114Q8NC26 417 aa11.85□□□□□ -0.51
IFT20-208ENST00000578985 RCC1LQ96I51 464 aaKnown RBP11.85□□□□□ -0.51
IFT20-208ENST00000578985 CXorf58Q96LI9 332 aa11.85□□□□□ -0.51
IFT20-208ENST00000578985 SEC22CQ9BRL7 303 aa11.85□□□□□ -0.51
IFT20-208ENST00000578985 S4R3C0 116 aa11.85□□□□□ -0.51
IFT20-208ENST00000578985 MFSD2BA6NFX1 497 aa11.84□□□□□ -0.51
IFT20-208ENST00000578985 PITX3O75364 302 aa11.84□□□□□ -0.51
IFT20-208ENST00000578985 ADAP1O75689 374 aa11.84□□□□□ -0.51
IFT20-208ENST00000578985 IFNA21P01568 189 aa11.84□□□□□ -0.51
IFT20-208ENST00000578985 IGLL1P15814 213 aa11.84□□□□□ -0.51
IFT20-208ENST00000578985 HOXD3P31249 432 aaPredicted RBP11.84□□□□□ -0.51
IFT20-208ENST00000578985 SUB1P53999 127 aaKnown RBP eCLIP11.84□□□□□ -0.51
IFT20-208ENST00000578985 TNFRSF9Q07011 255 aa11.84□□□□□ -0.51
IFT20-208ENST00000578985 DUSP18Q8NEJ0 188 aa11.84□□□□□ -0.51
IFT20-208ENST00000578985 VN1R17PQ8TDU5 208 aa11.84□□□□□ -0.51
IFT20-208ENST00000578985 MITD1Q8WV92 249 aa11.84□□□□□ -0.51
IFT20-208ENST00000578985 DCUN1D4Q92564 292 aa11.84□□□□□ -0.51
IFT20-208ENST00000578985 MISP3Q96FF7 219 aa11.84□□□□□ -0.51
IFT20-208ENST00000578985 HEYLQ9NQ87 328 aaPredicted RBP11.84□□□□□ -0.51
IFT20-208ENST00000578985 HSPB7Q9UBY9 170 aa11.84□□□□□ -0.51
IFT20-208ENST00000578985 TRRAPQ9Y4A5 3859 aa11.84□□□□□ -0.51
IFT20-208ENST00000578985 TRBV7-1A0A0A6YYK4 115 aa11.83□□□□□ -0.52
IFT20-208ENST00000578985 RNASE2P10153 161 aaKnown RBP11.83□□□□□ -0.52
IFT20-208ENST00000578985 OXLD1Q5BKU9 147 aa11.83□□□□□ -0.52
IFT20-208ENST00000578985 CLEC19AQ6UXS0 136 aa11.83□□□□□ -0.52
IFT20-208ENST00000578985 ZNF431Q8TF32 576 aaPredicted RBP11.83□□□□□ -0.52
IFT20-208ENST00000578985 DLX4Q92988 240 aaPredicted RBP11.83□□□□□ -0.52
IFT20-208ENST00000578985 CCDC140Q96MF4 163 aa11.83□□□□□ -0.52
IFT20-208ENST00000578985 MCRIP2Q9BUT9 160 aaKnown RBP11.83□□□□□ -0.52
IFT20-208ENST00000578985 RBKSQ9H477 322 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms