RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 IZUMO4Q1ZYL8 232 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 Q56UQ5 140 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 SPINK9Q5DT21 86 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 TMED4Q7Z7H5 227 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 HAPLN4Q86UW8 402 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 CADM3Q8N126 398 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 SLC35G3Q8N808 338 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 DYNLRB2Q8TF09 96 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 PINX1Q96BK5 328 aaKnown RBP5.02□□□□□ -1.61
TRAF4-213ENST00000578917 MISP3Q96FF7 219 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 FANCD2OSQ96PS1 177 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 RTBDNQ9BSG5 229 aaPredicted RBP5.02□□□□□ -1.61
TRAF4-213ENST00000578917 TMEM222Q9H0R3 208 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 PLEKHA3Q9HB20 300 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.02□□□□□ -1.61
TRAF4-213ENST00000578917 TMEM14BQ9NUH8 114 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 GPR132Q9UNW8 380 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 SMAD5-AS1Q9Y6J3 95 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 TNCP24821 2201 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 A0A0B4J293 547 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 IGHV3-35A0A0C4DH35 117 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 LINC00854A0A1B0GVQ3 168 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 MFSD2BA6NFX1 497 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 OR2T8A6NH00 312 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 CENPXA8MT69 81 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 YIF1AO95070 293 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 IGKV1-39P01597 117 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 IGKV1-5P01602 117 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 IGKV1D-39P04432 117 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 ETV6P41212 452 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 HOXA1P49639 335 aaPredicted RBP5.01□□□□□ -1.61
TRAF4-213ENST00000578917 GUCA2BQ16661 112 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 TMEM268Q5VZI3 342 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 TRIQKQ629K1 86 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 LCN12Q6JVE5 192 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 GTSCR1Q86UQ5 136 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 GPHB5Q86YW7 130 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 OR1P1Q8NH06 330 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 VN1R17PQ8TDU5 208 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 RBPMSQ93062 196 aaKnown RBP5.01□□□□□ -1.61
TRAF4-213ENST00000578917 SOSTQ9BQB4 213 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 C5orf66Q9H5L9 145 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 NAA60Q9H7X0 242 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 TUBA4BQ9H853 241 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 PALMDQ9NP74 551 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 HEYLQ9NQ87 328 aaPredicted RBP5.01□□□□□ -1.61
TRAF4-213ENST00000578917 GAR1Q9NY12 217 aaKnown RBP5.01□□□□□ -1.61
TRAF4-213ENST00000578917 C21orf62Q9NYP8 219 aa5.01□□□□□ -1.61
TRAF4-213ENST00000578917 F11RQ9Y624 299 aaKnown RBP5.01□□□□□ -1.61
TRAF4-213ENST00000578917 PIGBOS1A0A0B4J2F0 54 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 CRYM-AS1A6NIL9 109 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 DBX1A6NMT0 343 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 CEBPZOSA8MTT3 80 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 NUPL2O15504 423 aaKnown RBP5□□□□□ -1.61
TRAF4-213ENST00000578917 ST8SIA3O43173 380 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 CDS2O95674 445 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 IGLV1-51P01701 117 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 IGHV3-48P01763 117 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 CSN3P07498 182 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 FOLR2P14207 255 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 VAMP1P23763 118 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 UCP1P25874 307 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 MFAP4P55083 255 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 SRPXP78539 464 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 PRCDQ00LT1 54 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 SPSB3Q6PJ21 355 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 FAM219AQ8IW50 185 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 SELENOHQ8IZQ5 122 aaKnown RBP5□□□□□ -1.61
TRAF4-213ENST00000578917 ZNF502Q8TBZ5 544 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 SCARB1Q8WTV0 552 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 GLYATL2Q8WU03 294 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 BSCL2Q96G97 398 aaPredicted RBP5□□□□□ -1.61
TRAF4-213ENST00000578917 CCDC140Q96MF4 163 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 ASCL2Q99929 193 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 B9D2Q9BPU9 175 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 SLC25A21Q9BQT8 299 aaPredicted RBP5□□□□□ -1.61
TRAF4-213ENST00000578917 C20orf24Q9BUV8 137 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 RBM38Q9H0Z9 239 aaKnown RBP5□□□□□ -1.61
TRAF4-213ENST00000578917 HIPK2Q9H2X6 1198 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 SLC2A8Q9NY64 477 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 CACFD1Q9UGQ2 172 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 UFC1Q9Y3C8 167 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 V9GYH0 126 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 NBEAL2Q6ZNJ1 2754 aa5□□□□□ -1.61
TRAF4-213ENST00000578917 C2orf70A6NJV1 201 aa4.99□□□□□ -1.61
TRAF4-213ENST00000578917 LGALS9O00182 355 aa4.99□□□□□ -1.61
TRAF4-213ENST00000578917 TGOLN2O43493 480 aa4.99□□□□□ -1.61
TRAF4-213ENST00000578917 GNG7O60262 68 aa4.99□□□□□ -1.61
TRAF4-213ENST00000578917 SCGB2A1O75556 95 aa4.99□□□□□ -1.61
TRAF4-213ENST00000578917 NHLRC4P0CG21 123 aaPredicted RBP4.99□□□□□ -1.61
TRAF4-213ENST00000578917 SULT1A3P0DMM9 295 aa4.99□□□□□ -1.61
TRAF4-213ENST00000578917 SULT1A4P0DMN0 295 aa4.99□□□□□ -1.61
TRAF4-213ENST00000578917 CBLN1P23435 193 aa4.99□□□□□ -1.61
TRAF4-213ENST00000578917 NPBWR1P48145 328 aa4.99□□□□□ -1.61
TRAF4-213ENST00000578917 SPCS3P61009 180 aa4.99□□□□□ -1.61
TRAF4-213ENST00000578917 RELQ04864 619 aaPredicted RBP4.99□□□□□ -1.61
TRAF4-213ENST00000578917 KLF9Q13886 244 aaPredicted RBP4.99□□□□□ -1.61
TRAF4-213ENST00000578917 CD300EQ496F6 205 aaPredicted RBP4.99□□□□□ -1.61
TRAF4-213ENST00000578917 TM4SF20Q53R12 229 aa4.99□□□□□ -1.61
TRAF4-213ENST00000578917 TMEM128Q5BJH2 165 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms