RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 A0A1W2PPQ1 181 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 IGLV2-23P01705 113 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 OR5G3P0C626 314 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 IGHV1-8P0DP01 117 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 MC5RP33032 325 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 CA7P43166 264 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 UCNP55089 124 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 FAM3BP58499 235 aaPredicted RBP7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 TAS2R45P59539 299 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 GAMTQ14353 236 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 FBXL19-AS1Q494R0 122 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 FAM78BQ5VT40 261 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 OR10W1Q8NGF6 305 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 RNASEH2CQ8TDP1 164 aaKnown RBP7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 TNFRSF14Q92956 283 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 RNF2Q99496 336 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 DERL1Q9BUN8 251 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 MRPL32Q9BYC8 188 aaKnown RBP7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 TMEM133Q9H2Q1 129 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 OR51M1Q9H341 326 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 SEPSECSQ9HD40 501 aaKnown RBP7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 PITPNC1Q9UKF7 332 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 LY96Q9Y6Y9 160 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 VPS13AQ96RL7 3174 aa7.57□□□□□ -1.2
CDK5RAP3-208ENST00000578525 CFAP54Q96N23 3096 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 FAM90A27PA6NNH2 459 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 C9JCJ5 164 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 FOXH1O75593 365 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 ACTL6BO94805 426 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 FSTL3O95633 263 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 PLAUP00749 431 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 FABP1P07148 127 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 SOD3P08294 240 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 C1QTNF9P0C862 333 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 LGALS7P47929 136 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 PPOXP50336 477 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 SUB1P53999 127 aaKnown RBP eCLIP7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 LCN2P80188 198 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 DIAPH2-AS1Q14236 149 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 HLA-DRB5Q30154 266 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 C4orf17Q53FE4 359 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 ACTL10Q5JWF8 245 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 PQLC2Q6ZP29 291 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 MOB3BQ86TA1 216 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 ZNF114Q8NC26 417 aa7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 ZNF430Q9H8G1 570 aaPredicted RBP7.56□□□□□ -1.2
CDK5RAP3-208ENST00000578525 URB1O60287 2271 aaKnown RBP7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 FRYLO94915 3013 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 DOCK11Q5JSL3 2073 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 IGKV1OR2-108A0A075B7D4 117 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 CGB1A6NKQ9 187 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 C8orf88P0DMB2 117 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 PSG5Q15238 335 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 SSX2Q16385 188 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 CLEC12BQ2HXU8 276 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 DNLZQ5SXM8 178 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 GFI1BQ5VTD9 330 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 MRPL41Q8IXM3 137 aaKnown RBP7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 TMEM183AQ8IXX5 376 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 C11orf42Q8N5U0 333 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 TEX45Q8NA69 505 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 OR10G8Q8NGN5 311 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 OR10D4PQ8NGN7 298 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 OR1P1Q8NH06 330 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 LINC01560Q8TB33 94 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 SFRP2Q96HF1 295 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 GPR61Q9BZJ8 451 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 GSN-AS1Q9NRJ2 163 aa7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 RALYQ9UKM9 306 aaKnown RBP7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 DIDO1Q9BTC0 2240 aaKnown RBP7.55□□□□□ -1.2
CDK5RAP3-208ENST00000578525 CACNA1DQ01668 2161 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 TRBV20OR9-2A0A075B6H5 130 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 TRAV9-1A0A075B6T8 112 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 IGHV2-26A0A0B4J1V2 119 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 PGPEP1LA6NFU8 196 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 ENSAO43768 121 aaKnown RBP7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 SLC25A17O43808 307 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 IGHV2-70P01814 119 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 RBP4P02753 201 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 GATA2P23769 480 aaPredicted RBP7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 PRRX1P54821 245 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 CTAG1AP78358 180 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 WT1-ASQ06250 92 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 KLRB1Q12918 225 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 FOXL1Q12952 345 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 MLANAQ16655 118 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 COA6Q5JTJ3 125 aaKnown RBP7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 C10orf55Q5SWW7 151 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 TEX38Q6PEX7 206 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 THAP8Q8NA92 274 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 ST6GALNAC3Q8NDV1 305 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 OR1L4Q8NGR5 311 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 OR2T6Q8NHC8 308 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 OCC1Q8TAD7 63 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 ZNF503Q96F45 646 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 ACY3Q96HD9 319 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 EAF1Q96JC9 268 aaPredicted RBP7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 AURKAIP1Q9NWT8 199 aaPredicted RBP7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 MIOXQ9UGB7 285 aa7.54□□□□□ -1.2
CDK5RAP3-208ENST00000578525 A0A0U1RQK1 487 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms