RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 SLC45A2Q9UMX9 530 aa8.96□□□□□ -0.98
SKA2-204ENST00000578519 POLR3KQ9Y2Y1 108 aaPredicted RBP8.96□□□□□ -0.98
SKA2-204ENST00000578519 A0A1W2PPI3 338 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 C9JQL5 133 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 F6UZH7 168 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 DNASE2O00115 360 aaPredicted RBP8.95□□□□□ -0.98
SKA2-204ENST00000578519 TIMM23O14925 209 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 PDE6DO43924 150 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 CLN5O75503 358 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 SCGB2A1O75556 95 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 VENTXO95231 258 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 FAM106CPP0CH98 169 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 CEBPGP53567 150 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 FGF8P55075 233 aaPredicted RBP8.95□□□□□ -0.98
SKA2-204ENST00000578519 LMO4P61968 165 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 MEF2BQ02080 365 aaPredicted RBP8.95□□□□□ -0.98
SKA2-204ENST00000578519 PAX2Q02962 417 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 HES1Q14469 280 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 HABP2Q14520 560 aaPredicted RBP8.95□□□□□ -0.98
SKA2-204ENST00000578519 MMDQ15546 238 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 MIC13Q5XKP0 118 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 ATRAIDQ6UW56 229 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 S100A7AQ86SG5 101 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 OR1P1Q8NH06 330 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 TMEM170AQ8WVE7 144 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 PFDN5Q99471 154 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 MRPL32Q9BYC8 188 aaKnown RBP8.95□□□□□ -0.98
SKA2-204ENST00000578519 BPESC1Q9GZL8 116 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 SIRPDQ9H106 197 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 TMEM167BQ9NRX6 74 aa8.95□□□□□ -0.98
SKA2-204ENST00000578519 TECRQ9NZ01 308 aaKnown RBP8.95□□□□□ -0.98
SKA2-204ENST00000578519 TMA7Q9Y2S6 64 aaKnown RBP8.95□□□□□ -0.98
SKA2-204ENST00000578519 PUS1Q9Y606 427 aaKnown RBP eCLIP8.95□□□□□ -0.98
SKA2-204ENST00000578519 MYOD1P15172 320 aa8.94□□□□□ -0.98
SKA2-204ENST00000578519 NPBWR1P48145 328 aa8.94□□□□□ -0.98
SKA2-204ENST00000578519 ATP5J2P56134 94 aa8.94□□□□□ -0.98
SKA2-204ENST00000578519 BPIFB3P59826 476 aa8.94□□□□□ -0.98
SKA2-204ENST00000578519 GNB1P62873 340 aa8.94□□□□□ -0.98
SKA2-204ENST00000578519 LCN2P80188 198 aa8.94□□□□□ -0.98
SKA2-204ENST00000578519 GAMTQ14353 236 aa8.94□□□□□ -0.98
SKA2-204ENST00000578519 SSX2Q16385 188 aa8.94□□□□□ -0.98
SKA2-204ENST00000578519 CYP2G1PQ6ZSU1 146 aa8.94□□□□□ -0.98
SKA2-204ENST00000578519 STPG3Q8N7X2 389 aa8.94□□□□□ -0.98
SKA2-204ENST00000578519 C15orf54Q8N8G6 183 aa8.94□□□□□ -0.98
SKA2-204ENST00000578519 OR10W1Q8NGF6 305 aa8.94□□□□□ -0.98
SKA2-204ENST00000578519 ABHD5Q8WTS1 349 aa8.94□□□□□ -0.98
SKA2-204ENST00000578519 GATAD1Q8WUU5 269 aa8.94□□□□□ -0.98
SKA2-204ENST00000578519 HILPDAQ9Y5L2 63 aa8.94□□□□□ -0.98
SKA2-204ENST00000578519 ARL2-SNX15V9GYD0 113 aa8.94□□□□□ -0.98
SKA2-204ENST00000578519 USF3Q68DE3 2245 aa8.94□□□□□ -0.98
SKA2-204ENST00000578519 SPTA1P02549 2419 aa8.94□□□□□ -0.98
SKA2-204ENST00000578519 TLN1Q9Y490 2541 aaKnown RBP8.94□□□□□ -0.98
SKA2-204ENST00000578519 A0A087WWC5 75 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 C7orf77A4D0Y5 90 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 H3BQ15 152 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 NDUFS7O75251 213 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 NDUFA3O95167 84 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 IGKV1D-33P01593 117 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 IGKV1-33P01594 117 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 IGHV4-39P01824 125 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 STAG3L2P0CL84 134 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 STAG3L3P0CL85 134 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 HOXB4P17483 251 aaPredicted RBP8.93□□□□□ -0.98
SKA2-204ENST00000578519 OR10J1P30954 320 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 PRR20EP86478 221 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 PRR20CP86479 221 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 PRR20DP86480 221 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 PRR20BP86481 221 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 PRR20AP86496 221 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 WT1-ASQ06250 92 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 EBI3Q14213 229 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 AKIRIN2Q53H80 203 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 PVRIGQ6DKI7 326 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 PQLC2Q6ZP29 291 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 CYB561D1Q8N8Q1 229 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 SSMEM1Q8WWF3 244 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 ACY3Q96HD9 319 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 UHRF2Q96PU4 802 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 FBXL15Q9H469 300 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 FUT9Q9Y231 359 aa8.93□□□□□ -0.98
SKA2-204ENST00000578519 F11RQ9Y624 299 aaKnown RBP8.93□□□□□ -0.98
SKA2-204ENST00000578519 CEP295Q9C0D2 2601 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 IGF2RP11717 2491 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 ELOA3CA0A087WX78 387 aaPredicted RBP8.92□□□□□ -0.98
SKA2-204ENST00000578519 TCRBV4S1A1TA0A5B7 111 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 IGLC7A0M8Q6 106 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 CXorf65A6NEN9 183 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 ZNF727A8MUV8 499 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 YIF1AO95070 293 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 DEFA4P12838 97 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 PAX6P26367 422 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 ZFP36P26651 326 aaKnown RBP8.92□□□□□ -0.98
SKA2-204ENST00000578519 TMEM241Q24JQ0 296 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 AWAT1Q58HT5 328 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 HCP5Q6MZN7 132 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 ZNF843Q8N446 348 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 THAP8Q8NA92 274 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 STXBP6Q8NFX7 210 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 OR4F5Q8NH21 305 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 C10orf105Q8TEF2 133 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms