RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 STXBP6Q8NFX7 210 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 TNCP24821 2201 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 IGHV2OR16-5A0A0B4J2B6 119 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 F2RL2O00254 374 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 CCL21O00585 134 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 NDUFS6O75380 124 aaKnown RBP10.08□□□□□ -0.8
ERBB2-206ENST00000578373 FOXF2Q12947 444 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 ZNF788Q6ZQV5 615 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 GBGT1Q8N5D6 347 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 GCSAMQ8N6F7 178 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 MYO9AB2RTY4 2548 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 IGHV3-49A0A0A0MS15 119 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 CORTO00230 105 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 UBE2CO00762 179 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 OR9G9P0C7N8 305 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 MAS1LP35410 378 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 HIST1H2BLQ99880 126 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 PCNX3Q9H6A9 2034 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 LAMA2P24043 3122 aaKnown RBP10.07□□□□□ -0.8
ERBB2-206ENST00000578373 HLA-DQA1P01909 254 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 RIGQ13278 110 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 COX19Q49B96 90 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 J3QR89 54 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 DLL1O00548 723 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 SERF1AO75920 110 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 LEPROTL1O95214 131 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 TMEM50AO95807 157 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 MYOD1P15172 320 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 ZFP36L1Q07352 338 aaKnown RBP10.07□□□□□ -0.8
ERBB2-206ENST00000578373 NMSQ5H8A3 153 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 LEMD1Q68G75 181 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 WDR82Q6UXN9 313 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 WFDC3Q8IUB2 231 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 LRTM2Q8N967 370 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 OCC1Q8TAD7 63 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 UBTD1Q9HAC8 227 aa10.07□□□□□ -0.8
ERBB2-206ENST00000578373 CD24P25063 80 aa10.06□□□□□ -0.8
ERBB2-206ENST00000578373 SLX1AQ9BQ83 275 aa10.06□□□□□ -0.8
ERBB2-206ENST00000578373 PMCHL2Q9BQD1 86 aa10.06□□□□□ -0.8
ERBB2-206ENST00000578373 SSBP4Q9BWG4 385 aaPredicted RBP10.06□□□□□ -0.8
ERBB2-206ENST00000578373 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.06□□□□□ -0.8
ERBB2-206ENST00000578373 RBFOX2O43251 390 aaKnown RBP eCLIP10.06□□□□□ -0.81e-6■■■■□ 19.5
ERBB2-206ENST00000578373 MT-ND6P03923 174 aa10.06□□□□□ -0.8
ERBB2-206ENST00000578373 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.06□□□□□ -0.8
ERBB2-206ENST00000578373 ZNF497Q6ZNH5 498 aa10.06□□□□□ -0.8
ERBB2-206ENST00000578373 LINC00305Q7Z4B0 112 aa10.06□□□□□ -0.8
ERBB2-206ENST00000578373 KCNS1Q96KK3 526 aa10.06□□□□□ -0.8
ERBB2-206ENST00000578373 RBM14Q96PK6 669 aaKnown RBP10.06□□□□□ -0.8
ERBB2-206ENST00000578373 HSPB7Q9UBY9 170 aa10.06□□□□□ -0.8
ERBB2-206ENST00000578373 TBL2Q9Y4P3 447 aaKnown RBP10.06□□□□□ -0.8
ERBB2-206ENST00000578373 M0QZK8 103 aa10.06□□□□□ -0.8
ERBB2-206ENST00000578373 GGCTO75223 188 aaKnown RBP10.06□□□□□ -0.8
ERBB2-206ENST00000578373 COMPP49747 757 aaPredicted RBP10.06□□□□□ -0.8
ERBB2-206ENST00000578373 RAB37Q96AX2 223 aa10.06□□□□□ -0.8
ERBB2-206ENST00000578373 SNRNP40Q96DI7 357 aaKnown RBP10.06□□□□□ -0.8
ERBB2-206ENST00000578373 C1RLQ9NZP8 487 aa10.06□□□□□ -0.8
ERBB2-206ENST00000578373 SPRR3Q9UBC9 169 aa10.06□□□□□ -0.8
ERBB2-206ENST00000578373 SELENOKQ9Y6D0 94 aa10.06□□□□□ -0.8
ERBB2-206ENST00000578373 A0A087WWC5 75 aa10.06□□□□□ -0.8
ERBB2-206ENST00000578373 SCGB1C2P0DMR2 95 aa10.06□□□□□ -0.8
ERBB2-206ENST00000578373 C10orf55Q5SWW7 151 aa10.06□□□□□ -0.8
ERBB2-206ENST00000578373 TMEM116Q8NCL8 245 aa10.06□□□□□ -0.8
ERBB2-206ENST00000578373 PLXNB1O43157 2135 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 IGHV3-23P01764 117 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 ANOS1P23352 680 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 LINC00469Q8N7U9 141 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 OR9G1Q8NH87 305 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 TXNDC17Q9BRA2 123 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 TRAV3A0A0B4J244 114 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 PYYP10082 97 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 SRSF6Q13247 344 aaKnown RBP10.05□□□□□ -0.8
ERBB2-206ENST00000578373 WDR31Q8NA23 367 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 OR4C13Q8NGP0 309 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 LINC01560Q8TB33 94 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 FBXL15Q9H469 300 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 LYNX1G3V0Z9 82 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 LYNX1P0DP58 116 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 NTF4P34130 210 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 GLRXP35754 106 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 SELENOTP62341 195 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 SPATA31B1PQ5VZV4 182 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 OR10W1Q8NGF6 305 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 TMEM208Q9BTX3 173 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 MRPL20Q9BYC9 149 aaKnown RBP10.05□□□□□ -0.8
ERBB2-206ENST00000578373 RANBP2P49792 3224 aaKnown RBP10.05□□□□□ -0.8
ERBB2-206ENST00000578373 VENTXO95231 258 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 IL18BPO95998 194 aa10.05□□□□□ -0.8
ERBB2-206ENST00000578373 TLN1Q9Y490 2541 aaKnown RBP10.04□□□□□ -0.8
ERBB2-206ENST00000578373 SAA2-SAA4A0A096LPE2 208 aa10.04□□□□□ -0.8
ERBB2-206ENST00000578373 IGKV1-6A0A0C4DH72 117 aa10.04□□□□□ -0.8
ERBB2-206ENST00000578373 SAA2P0DJI9 122 aaPredicted RBP10.04□□□□□ -0.8
ERBB2-206ENST00000578373 RPL7P18124 248 aaKnown RBP10.04□□□□□ -0.8
ERBB2-206ENST00000578373 GNG5P63218 68 aa10.04□□□□□ -0.8
ERBB2-206ENST00000578373 RSPO1Q2MKA7 263 aaPredicted RBP10.04□□□□□ -0.8
ERBB2-206ENST00000578373 BPIFA4PQ86YQ2 179 aa10.04□□□□□ -0.8
ERBB2-206ENST00000578373 HIST3H2BBQ8N257 126 aa10.04□□□□□ -0.8
ERBB2-206ENST00000578373 TWIST1Q15672 202 aa10.04□□□□□ -0.8
ERBB2-206ENST00000578373 ZNF841Q6ZN19 808 aa10.04□□□□□ -0.8
ERBB2-206ENST00000578373 ASCL5Q7RTU5 278 aa10.04□□□□□ -0.8
ERBB2-206ENST00000578373 TMEM256Q8N2U0 113 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms