RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 IFNA17P01571 189 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 IGHG2P01859 326 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 RLN2P04090 185 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 LYL1P12980 280 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 BTF3P20290 206 aaKnown RBP6.32□□□□□ -1.4
COPS3-215ENST00000578317 ATP5IP56385 69 aaPredicted RBP6.32□□□□□ -1.4
COPS3-215ENST00000578317 TAS2R30P59541 319 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 PRCDQ00LT1 54 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 AKAP14Q86UN6 197 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 TMEM68Q96MH6 324 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 CIB3Q96Q77 187 aaPredicted RBP6.32□□□□□ -1.4
COPS3-215ENST00000578317 RAB40CQ96S21 281 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 RNF126Q9BV68 326 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 CHIAQ9BZP6 476 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 ESM1Q9NQ30 184 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 ZNF580Q9UK33 172 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 LOC102723971A0A1B0GUV8 181 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 A0A1W2PN81 502 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 DNAJC9-AS1A6NH13 148 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 E7EUB6 86 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 K7EPK0 472 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 SYNGR2O43760 224 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 GPR137BO60478 399 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 CNIH1O95406 144 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 IGF1P05019 195 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 PET100P0DJ07 73 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 EGR2P11161 476 aaPredicted RBP6.32□□□□□ -1.4
COPS3-215ENST00000578317 SLC25A4P12235 298 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 CHRNA7P36544 502 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 VDAC2P45880 294 aaPredicted RBP6.32□□□□□ -1.4
COPS3-215ENST00000578317 RPL27AP46776 148 aaKnown RBP6.32□□□□□ -1.4
COPS3-215ENST00000578317 CRIP2P52943 208 aaPredicted RBP6.32□□□□□ -1.4
COPS3-215ENST00000578317 POLR2GP62487 172 aaKnown RBP eCLIP6.32□□□□□ -1.4
COPS3-215ENST00000578317 BLCAPP62952 87 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 FXYD3Q14802 87 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 TMEM65Q6PI78 240 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 OR2T35Q8NGX2 323 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 SRSF12Q8WXF0 261 aaKnown RBP6.32□□□□□ -1.4
COPS3-215ENST00000578317 SMIM8Q96KF7 97 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 C11orf1Q9H5F2 150 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 RANGRFQ9HD47 186 aaPredicted RBP6.32□□□□□ -1.4
COPS3-215ENST00000578317 WSB1Q9Y6I7 421 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 U3KQ87 197 aa6.32□□□□□ -1.4
COPS3-215ENST00000578317 A0A1B0GW64 132 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 MSGN1A6NI15 193 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 CGB1A6NKQ9 187 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 G3V3Q6 166 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 H0YIZ8 118 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 KCNAB3O43448 404 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 PFDN1O60925 122 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 DEDDO75618 318 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 TNFRSF6BO95407 300 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 PAX9P55771 341 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 ERHP84090 104 aaKnown RBP6.31□□□□□ -1.4
COPS3-215ENST00000578317 TNXAQ16473 311 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 AKIRIN2Q53H80 203 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 Q5BKY6 102 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 C11orf87Q6NUJ2 197 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 PRSS54Q6PEW0 395 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 Q8N2B8 174 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 SGMS2Q8NHU3 365 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 DTD1Q8TEA8 209 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 ARPC1AQ92747 370 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 CLCC1Q96S66 551 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 PRSS22Q9GZN4 317 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 NPFFR1Q9GZQ6 430 aa6.31□□□□□ -1.4
COPS3-215ENST00000578317 TRAV14DV4A0A0A6YYC5 116 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 IGLC7A0M8Q6 106 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 CEBPZOSA8MTT3 80 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 TEX22C9J3V5 150 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 E5RGE8 158 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 TRIM77I1YAP6 450 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 TCF21O43680 179 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 TSC22D2O75157 780 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 TSPAN9O75954 239 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 BRI3O95415 125 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 TMEM50AO95807 157 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 CRYGCP07315 174 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 MYOD1P15172 320 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 PVALBP20472 110 aaPredicted RBP6.3□□□□□ -1.4
COPS3-215ENST00000578317 PTTG1IPP53801 180 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 UBA52P62987 128 aaKnown RBP6.3□□□□□ -1.4
COPS3-215ENST00000578317 TMEM267Q0VDI3 215 aaPredicted RBP6.3□□□□□ -1.4
COPS3-215ENST00000578317 KLK9Q2XQG4 91 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 BSXQ3C1V8 233 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 PVRIGQ6DKI7 326 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 THAP6Q8TBB0 222 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 PPP1R14BQ96C90 147 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 HSPB9Q9BQS6 159 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 HIPK2Q9H2X6 1198 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 RBKSQ9H477 322 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 PLEKHA3Q9HB20 300 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 KLK9Q9UKQ9 250 aa6.3□□□□□ -1.4
COPS3-215ENST00000578317 RCL1Q9Y2P8 373 aaKnown RBP6.3□□□□□ -1.4
COPS3-215ENST00000578317 HMSDA8MTL9 139 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 J3KRW8 73 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 AP4M1O00189 453 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 WRBO00258 174 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 TSPAN15O95858 294 aa6.29□□□□□ -1.4
COPS3-215ENST00000578317 C1QBP02746 253 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms