RNA–Protein interactions for RNA: ENST00000577524.5

ARHGAP28-208, Transcript of Rho GTPase activating protein 28, human

TSL 5

Gene ARHGAP28, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP28-208	ENST00000577524	ANAPC10	Q9UM13	185 aa		4.13	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	RABL2B	Q9UNT1	228 aa		4.13	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	C14orf166	Q9Y224	244 aa	Known RBP	4.13	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	NSG2	Q9Y328	171 aa		4.13	□□□□□ -1.75
ARHGAP28-208	ENST00000577524		S4R3C0	116 aa		4.13	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	IGLV11-55	A0A075B6I3	123 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	TRAV3	A0A0B4J244	114 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	MFSD2B	A6NFX1	497 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	CCDC160	A6NGH7	325 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524		E7EUB6	86 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	C3orf84	H3BNL1	204 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	NUPL2	O15504	423 aa	Known RBP	4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	YIF1A	O95070	293 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	RAB3D	O95716	219 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	IFNA17	P01571	189 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	CD3D	P04234	171 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	BMI1	P35226	326 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	PPP5C	P53041	499 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	SUB1	P53999	127 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	PIGP	P57054	158 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	BRWD1-AS2	P59051	145 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	SSBP1	Q04837	148 aa	Known RBP	4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	REL	Q04864	619 aa	Predicted RBP	4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	MEF2D	Q14814	521 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	CD300E	Q496F6	205 aa	Predicted RBP	4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	ZNF585B	Q52M93	769 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	SPSB3	Q6PJ21	355 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	C19orf35	Q6ZS72	473 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	SLC35G3	Q8N808	338 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	UXS1	Q8NBZ7	420 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	OR10W1	Q8NGF6	305 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	OR52B4	Q8NGK2	314 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	OR52I2	Q8NH67	350 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	RAB2B	Q8WUD1	216 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	MISP3	Q96FF7	219 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	BSCL2	Q96G97	398 aa	Predicted RBP	4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	DIRAS2	Q96HU8	199 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	SCGB3A2	Q96PL1	93 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	NEURL2	Q9BR09	285 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	C20orf24	Q9BUV8	137 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	C6orf62	Q9GZU0	229 aa	Predicted RBP	4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	NAA50	Q9GZZ1	169 aa	Known RBP	4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	C21orf62	Q9NYP8	219 aa		4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	F11R	Q9Y624	299 aa	Known RBP	4.12	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	IGHV3-21	A0A0B4J1V1	117 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	IGHV3-35	A0A0C4DH35	117 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	C3orf85	A0A1B0GTC6	90 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	IGLC7	A0M8Q6	106 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	OR2T8	A6NH00	312 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	C15orf61	A6NNL5	157 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524		A8MZ25	164 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	OR11H12	B2RN74	326 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	GABARAP	H6UMI1	98 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	TGOLN2	O43493	480 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	GNG7	O60262	68 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	B3GALNT1	O75752	331 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	SCAF4	O95104	1147 aa	Known RBP	4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	AKAIN1	P0CW23	69 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	SMIM18	P0DKX4	95 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	LYL1	P12980	280 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	CBLN1	P23435	193 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	FAU	P35544	74 aa	Known RBP	4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	RPL5	P46777	297 aa	Known RBP	4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	NPBWR1	P48145	328 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	HOXA1	P49639	335 aa	Predicted RBP	4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	TMBIM6	P55061	237 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	MFAP4	P55083	255 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	ELL	P55199	621 aa	Predicted RBP	4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	RND3	P61587	244 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	HSPE1	P61604	102 aa	Known RBP	4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	WT1-AS	Q06250	92 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	CTF1	Q16619	201 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	DEFB114	Q30KQ6	69 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	STEAP1B	Q6NZ63	245 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	BTNL8	Q6UX41	500 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	IL34	Q6ZMJ4	242 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	CADM3	Q8N126	398 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	TMEM229B	Q8NBD8	167 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	DUSP18	Q8NEJ0	188 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	OR1P1	Q8NH06	330 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	TERB2	Q8NHR7	220 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	IL17D	Q8TAD2	202 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	MUC7	Q8TAX7	377 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	ZNF502	Q8TBZ5	544 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	MRGPRF	Q96AM1	343 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	PINX1	Q96BK5	328 aa	Known RBP	4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	ISOC1	Q96CN7	298 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	CCDC140	Q96MF4	163 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	ATP6V0B	Q99437	205 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	BCL7B	Q9BQE9	202 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	SRD5A3	Q9H8P0	318 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	NDUFA4L2	Q9NRX3	87 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	MRPL27	Q9P0M9	148 aa	Known RBP	4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	KLK11	Q9UBX7	282 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	MTFP1	Q9UDX5	166 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	RSL24D1	Q9UHA3	163 aa	Known RBP	4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	SCP2D1	Q9UJQ7	156 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	KCNIP3	Q9Y2W7	256 aa		4.11	□□□□□ -1.75
ARHGAP28-208	ENST00000577524	CEPT1	Q9Y6K0	416 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms