RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 S100ZQ8WXG8 99 aa7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 BSCL2Q96G97 398 aaPredicted RBP7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 ZNF414Q96IQ9 312 aa7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 CENPOQ9BU64 300 aa7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 SCRT1Q9BWW7 348 aa7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 HRH4Q9H3N8 390 aa7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 CCL28Q9NRJ3 127 aa7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 PLA2G2EQ9NZK7 142 aa7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 SSR3Q9UNL2 185 aa7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 HERC1Q15751 4861 aa7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 TRAV1-2A0A0B4J238 106 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 TRAV10A0A0B4J240 114 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 IGHV4-28A0A0C4DH34 117 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 IGHV7-4-1A0A0J9YVY3 117 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 ARL6IP5O75915 188 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 HSMCR30P0CW71 290 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 OR13C7P0DN81 318 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 OR10A3P58181 314 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 VBP1P61758 197 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 NCS1P62166 190 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 WT1-ASQ06250 92 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 CDNFQ49AH0 187 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 FAM90A2PQ658T7 463 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 PVRIGQ6DKI7 326 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 ZNF66Q6ZN08 573 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 ZNF767PQ75MW2 155 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 TPRA1Q86W33 373 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 NR2C2APQ86WQ0 139 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 CROCCP3Q8IVE0 287 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 SPAG16Q8N0X2 631 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 POM121L12Q8N7R1 296 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 TMEM116Q8NCL8 245 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 COMMD5Q9GZQ3 224 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 TXNL4BQ9NX01 149 aaKnown RBP7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 C21orf62Q9NYP8 219 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 DNAH5Q8TE73 4624 aa7.33□□□□□ -1.24
NPLOC4-220ENST00000576940 APOBP04114 4563 aaKnown RBP7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 ELOA3CA0A087WX78 387 aaPredicted RBP7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 TEX50A0A1B0GTY4 177 aa7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 C15orf61A6NNL5 157 aa7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 C15orf62A8K5M9 175 aa7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 YIF1AO95070 293 aa7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 SERPINE2P07093 398 aa7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 CTSGP08311 255 aa7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 GIG44P09565 113 aaPredicted RBP7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 CTXN2P0C2S0 81 aa7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 PTHLHP12272 177 aa7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 DEFB131AP59861 70 aa7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 FABP5Q01469 135 aa7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 Q56UQ5 140 aa7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 SPSB3Q6PJ21 355 aa7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 LILRB2Q8N423 598 aa7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 GDPD1Q8N9F7 314 aa7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 GIMAP1Q8WWP7 306 aa7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 SLC25A46Q96AG3 418 aa7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 ATG5Q9H1Y0 275 aa7.32□□□□□ -1.24
NPLOC4-220ENST00000576940 METTL21EPA6NDL7 271 aa7.31□□□□□ -1.24
NPLOC4-220ENST00000576940 K7EIM0 57 aa7.31□□□□□ -1.24
NPLOC4-220ENST00000576940 SULT1C2O00338 296 aa7.31□□□□□ -1.24
NPLOC4-220ENST00000576940 TRAPPC2P0DI81 140 aa7.31□□□□□ -1.24
NPLOC4-220ENST00000576940 TRAPPC2BP0DI82 140 aa7.31□□□□□ -1.24
NPLOC4-220ENST00000576940 DTYMKP23919 212 aa7.31□□□□□ -1.24
NPLOC4-220ENST00000576940 CNIH2Q6PI25 160 aa7.31□□□□□ -1.24
NPLOC4-220ENST00000576940 FAM24BQ8N5W8 94 aa7.31□□□□□ -1.24
NPLOC4-220ENST00000576940 NUDCD2Q8WVJ2 157 aa7.31□□□□□ -1.24
NPLOC4-220ENST00000576940 SECTM1Q8WVN6 248 aa7.31□□□□□ -1.24
NPLOC4-220ENST00000576940 CMTM3Q96MX0 182 aa7.31□□□□□ -1.24
NPLOC4-220ENST00000576940 SRSF8Q9BRL6 282 aaKnown RBP7.31□□□□□ -1.24
NPLOC4-220ENST00000576940 RNF126Q9BV68 326 aa7.31□□□□□ -1.24
NPLOC4-220ENST00000576940 QTRT1Q9BXR0 403 aaKnown RBP7.31□□□□□ -1.24
NPLOC4-220ENST00000576940 WDR12Q9GZL7 423 aaKnown RBP7.31□□□□□ -1.24
NPLOC4-220ENST00000576940 TMEM140Q9NV12 185 aa7.31□□□□□ -1.24
NPLOC4-220ENST00000576940 AGRNO00468 2067 aa7.31□□□□□ -1.24
NPLOC4-220ENST00000576940 IGLV2-18A0A075B6J9 118 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 DEFB131BA0A096LNP1 70 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 TRAV14DV4A0A0A6YYC5 116 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 IFITM5A6NNB3 132 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 NUPL2O15504 423 aaKnown RBP7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 CYB5BO43169 146 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 HPRT1P00492 218 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 APOHP02749 345 aaPredicted RBP7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 P0DMU3 169 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 FAM231AP0DMU4 169 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 FAM231CP0DMU5 169 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 NQO2P16083 231 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 RAB6AP20340 208 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 RORCP51449 518 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 SCAND1P57086 179 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 TAS2R31P59538 309 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 PAFAH1B2P68402 229 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 C12orf74Q32Q52 190 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 LGALS9BQ3B8N2 356 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 HACD4Q5VWC8 232 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 TCF24Q7RTU0 167 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 DMBX1Q8NFW5 382 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 AP3S1Q92572 193 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 BORCS5Q969J3 196 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 AIFM2Q9BRQ8 373 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 HINT2Q9BX68 163 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 MS4A6AQ9H2W1 248 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms