RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 OR4C46A6NHA9 309 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 HAND1O96004 215 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 SERPINA7P05543 415 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 SULT1A3P0DMM9 295 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 SULT1A4P0DMN0 295 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 NFYAP23511 347 aaPredicted RBP1.29□□□□□ -2.2
CDC27-219ENST00000576484 RPL5P46777 297 aaKnown RBP1.29□□□□□ -2.2
CDC27-219ENST00000576484 HIST1H3AP68431 136 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 MRPS15P82914 257 aaKnown RBP1.29□□□□□ -2.2
CDC27-219ENST00000576484 H3F3AP84243 136 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 C9orf64Q5T6V5 341 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 TMEM42Q69YG0 159 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 LPCAT3Q6P1A2 487 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 KTN1-AS1Q86SY8 53 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 ZNF676Q8N7Q3 588 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 OR13C4Q8NGS5 318 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 TSPAN32Q96QS1 320 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 NIPSNAP1Q9BPW8 284 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 DCSTAMPQ9H295 470 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 C8orf4Q9NR00 106 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 FBXL12Q9NXK8 326 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 NCOA1Q15788 1441 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 WDR90Q96KV7 1748 aa1.29□□□□□ -2.2
CDC27-219ENST00000576484 GGT3PA6NGU5 568 aa1.28□□□□□ -2.2
CDC27-219ENST00000576484 FABP5P3A8MUU1 101 aa1.28□□□□□ -2.2
CDC27-219ENST00000576484 SLC22A1O15245 554 aa1.28□□□□□ -2.2
CDC27-219ENST00000576484 FADS1O60427 444 aa1.28□□□□□ -2.2
CDC27-219ENST00000576484 HOXA6P31267 233 aa1.28□□□□□ -2.2
CDC27-219ENST00000576484 FXYD2P54710 66 aa1.28□□□□□ -2.2
CDC27-219ENST00000576484 REEP5Q00765 189 aa1.28□□□□□ -2.2
CDC27-219ENST00000576484 KCNJ8Q15842 424 aa1.28□□□□□ -2.2
CDC27-219ENST00000576484 IAH1Q2TAA2 248 aaPredicted RBP1.28□□□□□ -2.2
CDC27-219ENST00000576484 TMEM97Q5BJF2 176 aa1.28□□□□□ -2.2
CDC27-219ENST00000576484 RPL22L1Q6P5R6 122 aaKnown RBP1.28□□□□□ -2.2
CDC27-219ENST00000576484 ANKRD29Q8N6D5 301 aa1.28□□□□□ -2.2
CDC27-219ENST00000576484 CHMP6Q96FZ7 201 aa1.28□□□□□ -2.2
CDC27-219ENST00000576484 Q96M85 177 aa1.28□□□□□ -2.2
CDC27-219ENST00000576484 DERL1Q9BUN8 251 aa1.28□□□□□ -2.2
CDC27-219ENST00000576484 C20orf27Q9GZN8 174 aa1.28□□□□□ -2.2
CDC27-219ENST00000576484 TLNRD1Q9H1K6 362 aa1.28□□□□□ -2.2
CDC27-219ENST00000576484 GLTPQ9NZD2 209 aa1.28□□□□□ -2.2
CDC27-219ENST00000576484 FBXO5Q9UKT4 447 aa1.28□□□□□ -2.2
CDC27-219ENST00000576484 TMEM56-RWDD3S4R434 201 aa1.28□□□□□ -2.2
CDC27-219ENST00000576484 MALRD1Q5VYJ5 2156 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 CCDC88CQ9P219 2028 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 SCAF11Q99590 1463 aaKnown RBP1.27□□□□□ -2.21
CDC27-219ENST00000576484 TRAV26-2A0A0B4J265 109 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 A0A0D9SEW6 157 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 TRBV10-2A0A0K0K1G8 114 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 OR51F1A6NGY5 319 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 HMSDA8MTL9 139 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 CNIH1O95406 144 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 IGKV1-5P01602 117 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 PPBPP02775 128 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 IFNA6P05013 189 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 DEFA4P12838 97 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 HIST1H2BOP23527 126 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 HIST1H2BBP33778 126 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 HIST1H2BDP58876 126 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 RPS20P60866 119 aaKnown RBP1.27□□□□□ -2.21
CDC27-219ENST00000576484 HIST1H2BCP62807 126 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 HBA1P69905 142 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 SPA17Q15506 151 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 HIST2H2BEQ16778 126 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.27□□□□□ -2.21
CDC27-219ENST00000576484 AADACL3Q5VUY0 350 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 MCFD2Q8NI22 146 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 RASSF5Q8WWW0 418 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 HIST1H2BHQ93079 126 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 TOMM6Q96B49 74 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 HIST1H2BNQ99877 126 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 HIST1H2BMQ99879 126 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 RETNLBQ9BQ08 111 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 CMSS1Q9BQ75 279 aaKnown RBP1.27□□□□□ -2.21
CDC27-219ENST00000576484 TRIM4Q9C037 500 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 CYSTM1Q9H1C7 97 aa1.27□□□□□ -2.21
CDC27-219ENST00000576484 IGKV1D-43A0A0B4J1Z2 117 aa1.26□□□□□ -2.21
CDC27-219ENST00000576484 EXOC1LA0A1B0GW35 172 aa1.26□□□□□ -2.21
CDC27-219ENST00000576484 DPRXA6NFQ7 191 aa1.26□□□□□ -2.21
CDC27-219ENST00000576484 IFNA10P01566 189 aa1.26□□□□□ -2.21
CDC27-219ENST00000576484 ZNF80P51504 273 aaPredicted RBP1.26□□□□□ -2.21
CDC27-219ENST00000576484 CTAG1AP78358 180 aa1.26□□□□□ -2.21
CDC27-219ENST00000576484 CDK10Q15131 360 aa1.26□□□□□ -2.21
CDC27-219ENST00000576484 SPANXN3Q5MJ09 141 aa1.26□□□□□ -2.21
CDC27-219ENST00000576484 FAM27BQ5VT28 67 aa1.26□□□□□ -2.21
CDC27-219ENST00000576484 OR6V1Q8N148 313 aa1.26□□□□□ -2.21
CDC27-219ENST00000576484 TMEM86AQ8N2M4 240 aa1.26□□□□□ -2.21
CDC27-219ENST00000576484 OR5B17Q8NGF7 314 aa1.26□□□□□ -2.21
CDC27-219ENST00000576484 C10orf105Q8TEF2 133 aa1.26□□□□□ -2.21
CDC27-219ENST00000576484 TMEM147Q9BVK8 224 aa1.26□□□□□ -2.21
CDC27-219ENST00000576484 PRELID3BQ9Y3B1 194 aa1.26□□□□□ -2.21
CDC27-219ENST00000576484 PTPRSQ13332 1948 aa1.26□□□□□ -2.21
CDC27-219ENST00000576484 RALGAPA2Q2PPJ7 1873 aa1.25□□□□□ -2.21
CDC27-219ENST00000576484 TRAV9-1A0A075B6T8 112 aa1.25□□□□□ -2.21
CDC27-219ENST00000576484 MEIKINA0A087WXM9 373 aa1.25□□□□□ -2.21
CDC27-219ENST00000576484 TRBV6-5A0A0K0K1A5 114 aa1.25□□□□□ -2.21
CDC27-219ENST00000576484 FAM236DA0A1B0GTK5 79 aa1.25□□□□□ -2.21
CDC27-219ENST00000576484 hADV38S2A0JD32 116 aa1.25□□□□□ -2.21
CDC27-219ENST00000576484 MEIS3P1A6NDR6 274 aa1.25□□□□□ -2.21
CDC27-219ENST00000576484 TRAPPC2LH3BP13 241 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms