RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 IFITM10A6NMD0 228 aa11.37□□□□□ -0.59
TVP23A-207ENST00000573360 YPEL1O60688 119 aa11.37□□□□□ -0.59
TVP23A-207ENST00000573360 COX6B1P14854 86 aa11.37□□□□□ -0.59
TVP23A-207ENST00000573360 YPEL2Q96QA6 119 aa11.37□□□□□ -0.59
TVP23A-207ENST00000573360 NAV3Q8IVL0 2385 aa11.37□□□□□ -0.59
TVP23A-207ENST00000573360 B4DEV8 164 aa11.37□□□□□ -0.59
TVP23A-207ENST00000573360 GNB1P62873 340 aa11.37□□□□□ -0.59
TVP23A-207ENST00000573360 SP5Q6BEB4 398 aaPredicted RBP11.37□□□□□ -0.59
TVP23A-207ENST00000573360 ACSM6Q6P461 480 aa11.37□□□□□ -0.59
TVP23A-207ENST00000573360 OR10A7Q8NGE5 316 aa11.37□□□□□ -0.59
TVP23A-207ENST00000573360 HSD17B10Q99714 261 aaKnown RBP11.37□□□□□ -0.59
TVP23A-207ENST00000573360 ACTR3CQ9C0K3 210 aaPredicted RBP11.37□□□□□ -0.59
TVP23A-207ENST00000573360 HEYLQ9NQ87 328 aaPredicted RBP11.37□□□□□ -0.59
TVP23A-207ENST00000573360 NAT8Q9UHE5 227 aa11.37□□□□□ -0.59
TVP23A-207ENST00000573360 ABCA2Q9BZC7 2435 aa11.37□□□□□ -0.59
TVP23A-207ENST00000573360 NDUFS6O75380 124 aaKnown RBP11.37□□□□□ -0.59
TVP23A-207ENST00000573360 IGKV1D-33P01593 117 aa11.37□□□□□ -0.59
TVP23A-207ENST00000573360 IGKV1-33P01594 117 aa11.37□□□□□ -0.59
TVP23A-207ENST00000573360 ELOVL1Q9BW60 279 aa11.37□□□□□ -0.59
TVP23A-207ENST00000573360 IGHV2-70P01814 119 aa11.36□□□□□ -0.59
TVP23A-207ENST00000573360 SSBP3Q9BWW4 388 aaPredicted RBP11.36□□□□□ -0.59
TVP23A-207ENST00000573360 PATZ1Q9HBE1 687 aaKnown RBP11.36□□□□□ -0.59
TVP23A-207ENST00000573360 RAB9BQ9NP90 201 aa11.36□□□□□ -0.59
TVP23A-207ENST00000573360 RAB7AP51149 207 aa11.36□□□□□ -0.59
TVP23A-207ENST00000573360 BRWD1-AS2P59051 145 aa11.36□□□□□ -0.59
TVP23A-207ENST00000573360 PLGLAQ15195 96 aa11.36□□□□□ -0.59
TVP23A-207ENST00000573360 RAB24Q969Q5 203 aa11.36□□□□□ -0.59
TVP23A-207ENST00000573360 QTRT1Q9BXR0 403 aaKnown RBP11.36□□□□□ -0.59
TVP23A-207ENST00000573360 PARLQ9H300 379 aa11.36□□□□□ -0.59
TVP23A-207ENST00000573360 LOC105371242A0A075B767 164 aa11.36□□□□□ -0.59
TVP23A-207ENST00000573360 IGHV3-48P01763 117 aa11.36□□□□□ -0.59
TVP23A-207ENST00000573360 PPOXP50336 477 aa11.36□□□□□ -0.59
TVP23A-207ENST00000573360 FAM3BP58499 235 aaPredicted RBP11.36□□□□□ -0.59
TVP23A-207ENST00000573360 SSX2Q16385 188 aa11.36□□□□□ -0.59
TVP23A-207ENST00000573360 TGIF2LXQ8IUE1 241 aa11.36□□□□□ -0.59
TVP23A-207ENST00000573360 HIST3H2BBQ8N257 126 aa11.36□□□□□ -0.59
TVP23A-207ENST00000573360 TMEM147Q9BVK8 224 aa11.36□□□□□ -0.59
TVP23A-207ENST00000573360 CHODLQ9H9P2 273 aa11.36□□□□□ -0.59
TVP23A-207ENST00000573360 DMRT1Q9Y5R6 373 aa11.36□□□□□ -0.59
TVP23A-207ENST00000573360 MYO9AB2RTY4 2548 aa11.35□□□□□ -0.59
TVP23A-207ENST00000573360 XKRY2A2RUG3 117 aa11.35□□□□□ -0.59
TVP23A-207ENST00000573360 C22orf15Q8WYQ4 148 aa11.35□□□□□ -0.59
TVP23A-207ENST00000573360 HARBI1Q96MB7 349 aa11.35□□□□□ -0.59
TVP23A-207ENST00000573360 PSMG3Q9BT73 122 aaPredicted RBP11.35□□□□□ -0.59
TVP23A-207ENST00000573360 FUT9Q9Y231 359 aa11.35□□□□□ -0.59
TVP23A-207ENST00000573360 TSTD3H0UI37 97 aa11.35□□□□□ -0.59
TVP23A-207ENST00000573360 F2RL2O00254 374 aa11.35□□□□□ -0.59
TVP23A-207ENST00000573360 OR9G9P0C7N8 305 aa11.35□□□□□ -0.59
TVP23A-207ENST00000573360 IGHV1-8P0DP01 117 aa11.35□□□□□ -0.59
TVP23A-207ENST00000573360 SLC25A6P12236 298 aa11.35□□□□□ -0.59
TVP23A-207ENST00000573360 NEU4Q8WWR8 484 aaPredicted RBP11.35□□□□□ -0.59
TVP23A-207ENST00000573360 RPEQ96AT9 228 aa11.35□□□□□ -0.59
TVP23A-207ENST00000573360 NPIPB11E5RHQ5 1161 aa11.34□□□□□ -0.59
TVP23A-207ENST00000573360 GCSAMLQ5JQS6 135 aa11.34□□□□□ -0.59
TVP23A-207ENST00000573360 MBD3L1Q8WWY6 194 aa11.34□□□□□ -0.59
TVP23A-207ENST00000573360 TMEM140Q9NV12 185 aa11.34□□□□□ -0.59
TVP23A-207ENST00000573360 PDLIM3Q53GG5 364 aaPredicted RBP11.34□□□□□ -0.59
TVP23A-207ENST00000573360 MRPL41Q8IXM3 137 aaKnown RBP11.34□□□□□ -0.59
TVP23A-207ENST00000573360 OR51G1Q8NGK1 321 aa11.34□□□□□ -0.59
TVP23A-207ENST00000573360 OR4X1Q8NH49 305 aa11.34□□□□□ -0.59
TVP23A-207ENST00000573360 CD81P60033 236 aa11.34□□□□□ -0.59
TVP23A-207ENST00000573360 HCFC1P51610 2035 aa11.34□□□□□ -0.59
TVP23A-207ENST00000573360 TRAV1-1A0A0B4J248 108 aa11.33□□□□□ -0.59
TVP23A-207ENST00000573360 CTXND1A0A1B0GTU2 59 aa11.33□□□□□ -0.59
TVP23A-207ENST00000573360 IGHV4-39P01824 125 aa11.33□□□□□ -0.59
TVP23A-207ENST00000573360 APOA2P02652 100 aa11.33□□□□□ -0.59
TVP23A-207ENST00000573360 EFNA4P52798 201 aa11.33□□□□□ -0.59
TVP23A-207ENST00000573360 C10orf55Q5SWW7 151 aa11.33□□□□□ -0.59
TVP23A-207ENST00000573360 YPEL4Q96NS1 127 aa11.33□□□□□ -0.59
TVP23A-207ENST00000573360 INSIG2Q9Y5U4 225 aa11.33□□□□□ -0.59
TVP23A-207ENST00000573360 C11orf94C9JXX5 98 aa11.33□□□□□ -0.6
TVP23A-207ENST00000573360 J3QR06 171 aa11.33□□□□□ -0.6
TVP23A-207ENST00000573360 CDC34P49427 236 aaPredicted RBP11.33□□□□□ -0.6
TVP23A-207ENST00000573360 LGALS4P56470 323 aa11.33□□□□□ -0.6
TVP23A-207ENST00000573360 FAM78BQ5VT40 261 aa11.33□□□□□ -0.6
TVP23A-207ENST00000573360 LHFPL4Q7Z7J7 247 aa11.33□□□□□ -0.6
TVP23A-207ENST00000573360 OR4S2Q8NH73 311 aa11.33□□□□□ -0.6
TVP23A-207ENST00000573360 SLC25A17O43808 307 aa11.33□□□□□ -0.6
TVP23A-207ENST00000573360 RPL23P62829 140 aaKnown RBP11.33□□□□□ -0.6
TVP23A-207ENST00000573360 RTL8BQ17RB0 113 aa11.33□□□□□ -0.6
TVP23A-207ENST00000573360 C11orf71Q6IPW1 123 aa11.33□□□□□ -0.6
TVP23A-207ENST00000573360 ELOA3CA0A087WX78 387 aaPredicted RBP11.32□□□□□ -0.6
TVP23A-207ENST00000573360 ZNF320A2RRD8 509 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 PGPEP1LA6NFU8 196 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 ACTL6BO94805 426 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 LIPFP07098 398 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 CT45A6P0DMU7 189 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 CT45A5P0DMU8 189 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 CT45A7P0DMV0 189 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 CGB3P0DN86 165 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 CGB7P0DN87 165 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 ZFP36P26651 326 aaKnown RBP11.32□□□□□ -0.6
TVP23A-207ENST00000573360 MEF2CQ06413 473 aaPredicted RBP11.32□□□□□ -0.6
TVP23A-207ENST00000573360 TMEM155Q4W5P6 130 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 P2RX4Q99571 388 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 C17orf112F2Z3M2 114 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 KBTBD11O94819 623 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 LINC00469Q8N7U9 141 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 SSMEM1Q8WWF3 244 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 TMEM133Q9H2Q1 129 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms