RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 C19orf35Q6ZS72 473 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 GPR141Q7Z602 305 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 SBSPONQ8IVN8 264 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 CADM3Q8N126 398 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 C15orf40Q8WUR7 153 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 FCAMRQ8WWV6 532 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 WWC2-AS2Q96NR7 200 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 SRSF8Q9BRL6 282 aaKnown RBP5.65□□□□□ -1.5
NUP88-205ENST00000572809 KLK11Q9UBX7 282 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 KLK9Q9UKQ9 250 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 S4R3C0 116 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 U3KQK5 164 aa5.65□□□□□ -1.5
NUP88-205ENST00000572809 IGLV11-55A0A075B6I3 123 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 TRBV7-1A0A0A6YYK4 115 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 MARCH11A6NNE9 402 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 SNAPC5O75971 98 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 TPPPO94811 219 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 IGHV3-23P01764 117 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 HLA-AP01891 365 aaKnown RBP5.64□□□□□ -1.51
NUP88-205ENST00000572809 IFNA6P05013 189 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 CLEC3BP05452 202 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 FGF2P09038 288 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 FRMD6-AS1P0C7T7 363 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 OR13C7P0DN81 318 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 G6PCP35575 357 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 ALDH3B2P48448 385 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 PHLDA2Q53GA4 152 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 RNASE12Q5GAN4 147 aaKnown RBP5.64□□□□□ -1.51
NUP88-205ENST00000572809 LCN12Q6JVE5 192 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 TBC1D26Q86UD7 250 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 GPHB5Q86YW7 130 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 OR10W1Q8NGF6 305 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 OR1L8Q8NGR8 309 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 EEF1AKMT3Q96AZ1 226 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 CXorf58Q96LI9 332 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 ABHD1Q96SE0 405 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 QTRT1Q9BXR0 403 aaKnown RBP5.64□□□□□ -1.51
NUP88-205ENST00000572809 FXYD6Q9H0Q3 95 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 FAM212BQ9NTI7 297 aaPredicted RBP5.64□□□□□ -1.51
NUP88-205ENST00000572809 FKBP11Q9NYL4 201 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 THYN1Q9P016 225 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 EXTL2Q9UBQ6 330 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 NSG2Q9Y328 171 aa5.64□□□□□ -1.51
NUP88-205ENST00000572809 IGLC7A0M8Q6 106 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 IZUMO1RA6ND01 250 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 LGALS9O00182 355 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 CTDSP2O14595 271 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 RGS5O15539 181 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 CYB5BO43169 146 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 SERPINE2P07093 398 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 IGHV4-30-4P0DP06 118 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 PTBP1P26599 531 aaKnown RBP eCLIP5.63□□□□□ -1.51
NUP88-205ENST00000572809 ARL3P36405 182 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 FAM106AQ4KMX7 169 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 RNASE10Q5GAN6 216 aaKnown RBP5.63□□□□□ -1.51
NUP88-205ENST00000572809 THOC7Q6I9Y2 204 aaKnown RBP5.63□□□□□ -1.51
NUP88-205ENST00000572809 SLC25A24Q6NUK1 477 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 ADAMTSL5Q6ZMM2 481 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 HSD17B13Q7Z5P4 300 aaPredicted RBP5.63□□□□□ -1.51
NUP88-205ENST00000572809 CLVS1Q8IUQ0 354 aaPredicted RBP5.63□□□□□ -1.51
NUP88-205ENST00000572809 SGPP2Q8IWX5 399 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 SLC38A6Q8IZM9 456 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 Q8N402 240 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 OR2K2Q8NGT1 345 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 OR52I2Q8NH67 350 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 TMEM56Q96MV1 263 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 TSC22D3Q99576 134 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 HINT2Q9BX68 163 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 NDUFA4L2Q9NRX3 87 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 MTFP1Q9UDX5 166 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 OR51B2Q9Y5P1 312 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 COL7A1Q02388 2944 aa5.63□□□□□ -1.51
NUP88-205ENST00000572809 ZNF320A2RRD8 509 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 MFSD2BA6NFX1 497 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 C2orf70A6NJV1 201 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 A8MZ25 164 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 F5H697 171 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 CD3DP04234 171 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 FOLR2P14207 255 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 PGAM2P15259 253 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 TBPP20226 339 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 TMBIM6P55061 237 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 WT1-ASQ06250 92 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 SPCS2Q15005 226 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 DEFB114Q30KQ6 69 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 CD300EQ496F6 205 aaPredicted RBP5.62□□□□□ -1.51
NUP88-205ENST00000572809 PLET1Q6UQ28 207 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 H2BFWTQ7Z2G1 175 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 GTSCR1Q86UQ5 136 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 ARRDC1Q8N5I2 433 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 GDPD1Q8N9F7 314 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 TMEM229BQ8NBD8 167 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 OR5B3Q8NH48 314 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 OR4A16Q8NH70 328 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 TERB2Q8NHR7 220 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 VN1R17PQ8TDU5 208 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 LSM10Q969L4 123 aaKnown RBP5.62□□□□□ -1.51
NUP88-205ENST00000572809 ZNF486Q96H40 463 aaPredicted RBP5.62□□□□□ -1.51
NUP88-205ENST00000572809 SEC22AQ96IW7 307 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 MIXL1Q9H2W2 232 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms