RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 IFNA5P01569 189 aa9.16□□□□□ -0.94
CCDC40-208ENST00000572270 APOHP02749 345 aaPredicted RBP9.16□□□□□ -0.94
CCDC40-208ENST00000572270 TRAPPC2P0DI81 140 aa9.16□□□□□ -0.94
CCDC40-208ENST00000572270 TRAPPC2BP0DI82 140 aa9.16□□□□□ -0.94
CCDC40-208ENST00000572270 GNRHRP30968 328 aa9.16□□□□□ -0.94
CCDC40-208ENST00000572270 ICAM4Q14773 271 aa9.16□□□□□ -0.94
CCDC40-208ENST00000572270 RCN1Q15293 331 aa9.16□□□□□ -0.94
CCDC40-208ENST00000572270 PLAC9Q5JTB6 97 aa9.16□□□□□ -0.94
CCDC40-208ENST00000572270 CDPF1Q6NVV7 123 aa9.16□□□□□ -0.94
CCDC40-208ENST00000572270 ZNF705AQ6ZN79 300 aaPredicted RBP9.16□□□□□ -0.94
CCDC40-208ENST00000572270 LILRB2Q8N423 598 aa9.16□□□□□ -0.94
CCDC40-208ENST00000572270 NXF2Q9GZY0 626 aaKnown RBP9.16□□□□□ -0.94
CCDC40-208ENST00000572270 ZNF705FA8MVS1 300 aaPredicted RBP9.15□□□□□ -0.94
CCDC40-208ENST00000572270 EI24O14681 340 aa9.15□□□□□ -0.94
CCDC40-208ENST00000572270 ZNF705DP0CH99 300 aaPredicted RBP9.15□□□□□ -0.94
CCDC40-208ENST00000572270 ZNF705BP0CI00 300 aaPredicted RBP9.15□□□□□ -0.94
CCDC40-208ENST00000572270 MFAP4P55083 255 aa9.15□□□□□ -0.94
CCDC40-208ENST00000572270 WT1-ASQ06250 92 aa9.15□□□□□ -0.94
CCDC40-208ENST00000572270 P2RY14Q15391 338 aa9.15□□□□□ -0.94
CCDC40-208ENST00000572270 LRRTM1Q86UE6 522 aa9.15□□□□□ -0.94
CCDC40-208ENST00000572270 CBR4Q8N4T8 237 aa9.15□□□□□ -0.94
CCDC40-208ENST00000572270 RAB40CQ96S21 281 aa9.15□□□□□ -0.94
CCDC40-208ENST00000572270 Q9H8V8 135 aa9.15□□□□□ -0.94
CCDC40-208ENST00000572270 MED4Q9NPJ6 270 aa9.15□□□□□ -0.94
CCDC40-208ENST00000572270 TAS2R8Q9NYW2 309 aa9.15□□□□□ -0.94
CCDC40-208ENST00000572270 CLEC2DQ9UHP7 191 aa9.15□□□□□ -0.94
CCDC40-208ENST00000572270 OR2W1Q9Y3N9 320 aa9.15□□□□□ -0.94
CCDC40-208ENST00000572270 LINC00588Q9Y4M8 146 aa9.15□□□□□ -0.94
CCDC40-208ENST00000572270 A0A1W2PS18 150 aa9.14□□□□□ -0.95
CCDC40-208ENST00000572270 ERICH4A6NGS2 130 aa9.14□□□□□ -0.95
CCDC40-208ENST00000572270 UPK2O00526 184 aa9.14□□□□□ -0.95
CCDC40-208ENST00000572270 GNG7O60262 68 aa9.14□□□□□ -0.95
CCDC40-208ENST00000572270 BRWD1-AS2P59051 145 aa9.14□□□□□ -0.95
CCDC40-208ENST00000572270 CLINT1Q14677 625 aa9.14□□□□□ -0.95
CCDC40-208ENST00000572270 PHYHIPQ92561 330 aa9.14□□□□□ -0.95
CCDC40-208ENST00000572270 TXN2Q99757 166 aa9.14□□□□□ -0.95
CCDC40-208ENST00000572270 HINT2Q9BX68 163 aa9.14□□□□□ -0.95
CCDC40-208ENST00000572270 PLGRKTQ9HBL7 147 aa9.14□□□□□ -0.95
CCDC40-208ENST00000572270 DIMT1Q9UNQ2 313 aaKnown RBP9.14□□□□□ -0.95
CCDC40-208ENST00000572270 TRAV3A0A0B4J244 114 aa9.13□□□□□ -0.95
CCDC40-208ENST00000572270 IGLV2-14P01704 120 aa9.13□□□□□ -0.95
CCDC40-208ENST00000572270 HLA-DQB1P01920 261 aa9.13□□□□□ -0.95
CCDC40-208ENST00000572270 FGF2P09038 288 aa9.13□□□□□ -0.95
CCDC40-208ENST00000572270 NFYAP23511 347 aaPredicted RBP9.13□□□□□ -0.95
CCDC40-208ENST00000572270 FUSP35637 526 aaKnown RBP eCLIP9.13□□□□□ -0.95
CCDC40-208ENST00000572270 TAS2R31P59538 309 aa9.13□□□□□ -0.95
CCDC40-208ENST00000572270 PSMG4Q5JS54 123 aa9.13□□□□□ -0.95
CCDC40-208ENST00000572270 TOMM20LQ6UXN7 152 aa9.13□□□□□ -0.95
CCDC40-208ENST00000572270 DMBX1Q8NFW5 382 aa9.13□□□□□ -0.95
CCDC40-208ENST00000572270 OR1L8Q8NGR8 309 aa9.13□□□□□ -0.95
CCDC40-208ENST00000572270 APH1BQ8WW43 257 aa9.13□□□□□ -0.95
CCDC40-208ENST00000572270 LSM10Q969L4 123 aaKnown RBP9.13□□□□□ -0.95
CCDC40-208ENST00000572270 SLC25A46Q96AG3 418 aa9.13□□□□□ -0.95
CCDC40-208ENST00000572270 RAB3CQ96E17 227 aa9.13□□□□□ -0.95
CCDC40-208ENST00000572270 Q9H3A6 140 aa9.13□□□□□ -0.95
CCDC40-208ENST00000572270 YTHDF2Q9Y5A9 579 aaKnown RBP9.13□□□□□ -0.95
CCDC40-208ENST00000572270 HELTA6NFD8 242 aa9.12□□□□□ -0.95
CCDC40-208ENST00000572270 CD1AP06126 327 aa9.12□□□□□ -0.95
CCDC40-208ENST00000572270 NQO2P16083 231 aa9.12□□□□□ -0.95
CCDC40-208ENST00000572270 TALDO1P37837 337 aa9.12□□□□□ -0.95
CCDC40-208ENST00000572270 EIF4EBP1Q13541 118 aaPredicted RBP9.12□□□□□ -0.95
CCDC40-208ENST00000572270 USF2Q15853 346 aaPredicted RBP9.12□□□□□ -0.95
CCDC40-208ENST00000572270 SMN1Q16637 294 aaKnown RBP9.12□□□□□ -0.95
CCDC40-208ENST00000572270 KCTD21Q4G0X4 260 aa9.12□□□□□ -0.95
CCDC40-208ENST00000572270 OGFRL1Q5TC84 451 aaPredicted RBP9.12□□□□□ -0.95
CCDC40-208ENST00000572270 SSX7Q7RTT5 188 aa9.12□□□□□ -0.95
CCDC40-208ENST00000572270 DCANP1Q8TF63 244 aa9.12□□□□□ -0.95
CCDC40-208ENST00000572270 MISP3Q96FF7 219 aa9.12□□□□□ -0.95
CCDC40-208ENST00000572270 KRTAP1-5Q9BYS1 174 aa9.12□□□□□ -0.95
CCDC40-208ENST00000572270 TMEM140Q9NV12 185 aa9.12□□□□□ -0.95
CCDC40-208ENST00000572270 KCNK7Q9Y2U2 307 aa9.12□□□□□ -0.95
CCDC40-208ENST00000572270 IGKV1D-13A0A0B4J2D9 117 aa9.11□□□□□ -0.95
CCDC40-208ENST00000572270 A0A1W2PPQ1 181 aa9.11□□□□□ -0.95
CCDC40-208ENST00000572270 HBE1P02100 147 aa9.11□□□□□ -0.95
CCDC40-208ENST00000572270 IGKV1-13P0DP09 117 aa9.11□□□□□ -0.95
CCDC40-208ENST00000572270 CD37P11049 281 aa9.11□□□□□ -0.95
CCDC40-208ENST00000572270 NPPCP23582 126 aa9.11□□□□□ -0.95
CCDC40-208ENST00000572270 ALDH3B2P48448 385 aa9.11□□□□□ -0.95
CCDC40-208ENST00000572270 EIF2B2P49770 351 aaKnown RBP9.11□□□□□ -0.95
CCDC40-208ENST00000572270 INSL4Q14641 139 aa9.11□□□□□ -0.95
CCDC40-208ENST00000572270 ACSM3Q53FZ2 586 aa9.11□□□□□ -0.95
CCDC40-208ENST00000572270 SPAG16Q8N0X2 631 aa9.11□□□□□ -0.95
CCDC40-208ENST00000572270 ZNF485Q8NCK3 441 aa9.11□□□□□ -0.95
CCDC40-208ENST00000572270 NARS2Q96I59 477 aaKnown RBP9.11□□□□□ -0.95
CCDC40-208ENST00000572270 GPHA2Q96T91 129 aa9.11□□□□□ -0.95
CCDC40-208ENST00000572270 A0A075B6Q4 140 aa9.1□□□□□ -0.95
CCDC40-208ENST00000572270 TEX50A0A1B0GTY4 177 aa9.1□□□□□ -0.95
CCDC40-208ENST00000572270 LOC102723971A0A1B0GUV8 181 aa9.1□□□□□ -0.95
CCDC40-208ENST00000572270 SLC17A2O00624 439 aa9.1□□□□□ -0.95
CCDC40-208ENST00000572270 TNFSF12O43508 249 aa9.1□□□□□ -0.95
CCDC40-208ENST00000572270 DENRO43583 198 aaKnown RBP9.1□□□□□ -0.95
CCDC40-208ENST00000572270 HPRT1P00492 218 aa9.1□□□□□ -0.95
CCDC40-208ENST00000572270 CTXN2P0C2S0 81 aa9.1□□□□□ -0.95
CCDC40-208ENST00000572270 GADD45AP24522 165 aa9.1□□□□□ -0.95
CCDC40-208ENST00000572270 P2RY1P47900 373 aa9.1□□□□□ -0.95
CCDC40-208ENST00000572270 KRTAP10-1P60331 282 aa9.1□□□□□ -0.95
CCDC40-208ENST00000572270 ERVFC1-1P60608 527 aa9.1□□□□□ -0.95
CCDC40-208ENST00000572270 SNRPD3P62318 126 aaKnown RBP9.1□□□□□ -0.95
CCDC40-208ENST00000572270 GNGT1P63211 74 aa9.1□□□□□ -0.95
CCDC40-208ENST00000572270 ST3GAL4Q11206 333 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms