RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 FAM107BQ9H098 131 aa1.87□□□□□ -2.11
SHCBP1-206ENST00000567698 YTHDC2Q9H6S0 1430 aaKnown RBP1.87□□□□□ -2.11
SHCBP1-206ENST00000567698 ACER3Q9NUN7 267 aa1.87□□□□□ -2.11
SHCBP1-206ENST00000567698 REREQ9P2R6 1566 aa1.87□□□□□ -2.11
SHCBP1-206ENST00000567698 PLXND1Q9Y4D7 1925 aa1.87□□□□□ -2.11
SHCBP1-206ENST00000567698 COL18A1P39060 1754 aa1.87□□□□□ -2.11
SHCBP1-206ENST00000567698 ARAP1Q96P48 1450 aa1.87□□□□□ -2.11
SHCBP1-206ENST00000567698 A0A087WUU8 490 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 H7C1C5 153 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 I3L521 148 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 PIRO00625 290 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 SLC25A20O43772 301 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 ZNF73O43830 326 aaPredicted RBP1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 SH2D1AO60880 128 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 CDS2O95674 445 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 NPPCP23582 126 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 S100GP29377 79 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 CRABP1P29762 137 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 SRIP30626 198 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 SERPINB10P48595 397 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 TAS2R45P59539 299 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 TBPL1P62380 186 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 LCN6P62502 163 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 LTC4SQ16873 150 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 GLT8D1Q68CQ7 371 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 DHFR2Q86XF0 187 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 ZNF439Q8NDP4 499 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 RPS4Y2Q8TD47 263 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 SERPINI1Q99574 410 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 C6orf62Q9GZU0 229 aaPredicted RBP1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 SSR3Q9UNL2 185 aa1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 AMMECR1Q9Y4X0 333 aaPredicted RBP1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 TRPM3Q9HCF6 1732 aaPredicted RBP1.86□□□□□ -2.11
SHCBP1-206ENST00000567698 NCOA3Q9Y6Q9 1424 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 XIRP1Q702N8 1843 aaKnown RBP1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 TRBV19A0A075B6N1 114 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 TRBV24-1A0A075B6N3 115 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 A0A087WX48 190 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 TRAV41A0A0B4J266 112 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 DPRXA6NFQ7 191 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 OR2J2O76002 312 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 SRP19P09132 144 aaKnown RBP1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 PPIBP23284 216 aaKnown RBP1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 S100A7P31151 101 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 PSMD8P48556 350 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 ZNF80P51504 273 aaPredicted RBP1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 TPI1P60174 286 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 HBA1P69905 142 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 RHEBQ15382 184 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 FAM229BQ4G0N7 80 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 Q6Q795 121 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 SSX8Q7RTT4 187 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 FAM24BQ8N5W8 94 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 OR5J2Q8NH18 312 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 HIST1H2BAQ96A08 127 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 TOMM6Q96B49 74 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 CARD19Q96LW7 228 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 C20orf166-AS1Q96NR2 134 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 GPER1Q99527 375 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 COMMD5Q9GZQ3 224 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 CHST6Q9GZX3 395 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 EFCAB1Q9HAE3 211 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 JPT1Q9UK76 154 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 SHANK3Q9BYB0 1731 aa1.85□□□□□ -2.11
SHCBP1-206ENST00000567698 ZCCHC11Q5TAX3 1644 aaKnown RBP1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 DENND4CQ5VZ89 1909 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 MDFIC2A0A1B0GVS7 189 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 BUB1B-PAK6H3BSN5 160 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 SLC17A3O00476 420 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 NDUFC2O95298 119 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 CTSGP08311 255 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 RBP1P09455 135 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 ZNF705DP0CH99 300 aaPredicted RBP1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 CCL5P13501 91 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 ZNF22P17026 224 aaPredicted RBP1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 CA5AP35218 305 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 G6PCP35575 357 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 RAB13P51153 203 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 PIGPP57054 158 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 RPL30P62888 115 aaKnown RBP1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 CCL20P78556 96 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 SMCO1Q147U7 214 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 RASL11AQ6T310 242 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 AMTNQ6UX39 209 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 TOMM20LQ6UXN7 152 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 OR52R1Q8NGF1 315 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 OR10D4PQ8NGN7 298 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 H1FXQ92522 213 aaKnown RBP1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 BORCS5Q969J3 196 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 PLEKHB2Q96CS7 222 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 EFCAB11Q9BUY7 163 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 PBDC1Q9BVG4 233 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 TTTY13Q9BZ97 58 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 CCDC90BQ9GZT6 254 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 GSKIPQ9P0R6 139 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 OR52A1Q9UKL2 312 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 HSPB11Q9Y547 144 aa1.84□□□□□ -2.11
SHCBP1-206ENST00000567698 VWDEQ8N2E2 1590 aa1.84□□□□□ -2.12
SHCBP1-206ENST00000567698 KIF13BQ9NQT8 1826 aa1.84□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms