RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 SYS1-DBNDD2H3BUS1 97 aa20.58■□□□□ 0.89
FANCA-221ENST00000566889 CIDEAO60543 219 aa20.58■□□□□ 0.89
FANCA-221ENST00000566889 TNFSF15O95150 251 aa20.58■□□□□ 0.89
FANCA-221ENST00000566889 CA1P00915 261 aaPredicted RBP20.58■□□□□ 0.89
FANCA-221ENST00000566889 PSG9Q00887 426 aa20.58■□□□□ 0.89
FANCA-221ENST00000566889 KIR3DL3Q8N743 410 aa20.58■□□□□ 0.89
FANCA-221ENST00000566889 FAM168AQ92567 244 aa20.58■□□□□ 0.89
FANCA-221ENST00000566889 TMEM191AQ9H0A3 160 aa20.58■□□□□ 0.89
FANCA-221ENST00000566889 CEP192Q8TEP8 1941 aa20.58■□□□□ 0.88
FANCA-221ENST00000566889 IGHV3-43A0A0B4J1X8 118 aa20.58■□□□□ 0.88
FANCA-221ENST00000566889 SPINT2O43291 252 aa20.58■□□□□ 0.88
FANCA-221ENST00000566889 OR7C2O60412 319 aa20.58■□□□□ 0.88
FANCA-221ENST00000566889 CELA3BP08861 270 aa20.58■□□□□ 0.88
FANCA-221ENST00000566889 IGHV3-43DP0DP04 118 aa20.58■□□□□ 0.88
FANCA-221ENST00000566889 TMEM140Q9NV12 185 aa20.58■□□□□ 0.88
FANCA-221ENST00000566889 FAM120AOSQ5T036 256 aa20.57■□□□□ 0.88
FANCA-221ENST00000566889 OR2T6Q8NHC8 308 aa20.57■□□□□ 0.88
FANCA-221ENST00000566889 CHCHD1Q96BP2 118 aaKnown RBP20.57■□□□□ 0.88
FANCA-221ENST00000566889 DUSP23Q9BVJ7 150 aa20.57■□□□□ 0.88
FANCA-221ENST00000566889 CLEC5AQ9NY25 188 aa20.57■□□□□ 0.88
FANCA-221ENST00000566889 MED12LQ86YW9 2145 aa20.57■□□□□ 0.88
FANCA-221ENST00000566889 KIR2DS2P43631 304 aa20.57■□□□□ 0.88
FANCA-221ENST00000566889 HIST1H1AQ02539 215 aaPredicted RBP20.57■□□□□ 0.88
FANCA-221ENST00000566889 SSBP3Q9BWW4 388 aaPredicted RBP20.57■□□□□ 0.88
FANCA-221ENST00000566889 MS4A6AQ9H2W1 248 aa20.57■□□□□ 0.88
FANCA-221ENST00000566889 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.56■□□□□ 0.88
FANCA-221ENST00000566889 GRPP07492 148 aa20.56■□□□□ 0.88
FANCA-221ENST00000566889 ARF6P62330 175 aa20.56■□□□□ 0.88
FANCA-221ENST00000566889 SLC25A40Q8TBP6 338 aa20.56■□□□□ 0.88
FANCA-221ENST00000566889 NANOS1Q8WY41 292 aaKnown RBP20.56■□□□□ 0.88
FANCA-221ENST00000566889 ENY2Q9NPA8 101 aa20.56■□□□□ 0.88
FANCA-221ENST00000566889 TRAV3A0A0B4J244 114 aa20.55■□□□□ 0.88
FANCA-221ENST00000566889 C15orf61A6NNL5 157 aa20.55■□□□□ 0.88
FANCA-221ENST00000566889 DEFB108AA8MXU0 73 aa20.55■□□□□ 0.88
FANCA-221ENST00000566889 PROP1O75360 226 aa20.55■□□□□ 0.88
FANCA-221ENST00000566889 OR13A1Q8NGR1 328 aa20.55■□□□□ 0.88
FANCA-221ENST00000566889 SCRT2Q9NQ03 307 aa20.55■□□□□ 0.88
FANCA-221ENST00000566889 ZNF355PQ9NSJ1 428 aa20.55■□□□□ 0.88
FANCA-221ENST00000566889 DUSP13Q9UII6 198 aa20.55■□□□□ 0.88
FANCA-221ENST00000566889 CORTO00230 105 aa20.55■□□□□ 0.88
FANCA-221ENST00000566889 SRYQ05066 204 aa20.55■□□□□ 0.88
FANCA-221ENST00000566889 RAB30Q15771 203 aa20.55■□□□□ 0.88
FANCA-221ENST00000566889 AHRRA9YTQ3 701 aa20.54■□□□□ 0.88
FANCA-221ENST00000566889 TMEM11P17152 192 aa20.54■□□□□ 0.88
FANCA-221ENST00000566889 VKORC1L1Q8N0U8 176 aa20.54■□□□□ 0.88
FANCA-221ENST00000566889 URB1-AS1Q96HZ7 61 aa20.54■□□□□ 0.88
FANCA-221ENST00000566889 PTPRBP23467 1997 aa20.54■□□□□ 0.88
FANCA-221ENST00000566889 IGLC1P0CG04 106 aa20.54■□□□□ 0.88
FANCA-221ENST00000566889 COL8A2P25067 703 aa20.54■□□□□ 0.88
FANCA-221ENST00000566889 TBC1D28Q2M2D7 210 aa20.54■□□□□ 0.88
FANCA-221ENST00000566889 S1PR3Q99500 378 aa20.54■□□□□ 0.88
FANCA-221ENST00000566889 hDV102S1A0JD36 115 aa20.53■□□□□ 0.88
FANCA-221ENST00000566889 C8orf88P0DMB2 117 aa20.53■□□□□ 0.88
FANCA-221ENST00000566889 HSPE1P61604 102 aaKnown RBP20.53■□□□□ 0.88
FANCA-221ENST00000566889 VHLLQ6RSH7 139 aa20.53■□□□□ 0.88
FANCA-221ENST00000566889 RFESDQ8TAC1 157 aa20.53■□□□□ 0.88
FANCA-221ENST00000566889 SNRNP40Q96DI7 357 aaKnown RBP20.53■□□□□ 0.88
FANCA-221ENST00000566889 MEGF9Q9H1U4 602 aa20.53■□□□□ 0.88
FANCA-221ENST00000566889 BOKQ9UMX3 212 aaPredicted RBP20.53■□□□□ 0.88
FANCA-221ENST00000566889 FOXA2Q9Y261 457 aaPredicted RBP20.53■□□□□ 0.88
FANCA-221ENST00000566889 LY6G6EA0A0G2JKS1 128 aa20.53■□□□□ 0.88
FANCA-221ENST00000566889 PINLYPA6NC86 204 aa20.53■□□□□ 0.88
FANCA-221ENST00000566889 C15orf65H3BRN8 121 aa20.53■□□□□ 0.88
FANCA-221ENST00000566889 FOLR3P41439 243 aa20.53■□□□□ 0.88
FANCA-221ENST00000566889 GPR6P46095 362 aaPredicted RBP20.53■□□□□ 0.88
FANCA-221ENST00000566889 Q6ZR03 302 aa20.53■□□□□ 0.88
FANCA-221ENST00000566889 U3KQA8 63 aa20.53■□□□□ 0.88
FANCA-221ENST00000566889 CABIN1Q9Y6J0 2220 aa20.52■□□□□ 0.88
FANCA-221ENST00000566889 FREM1Q5H8C1 2179 aa20.52■□□□□ 0.88
FANCA-221ENST00000566889 A0A1B0GXF2 115 aa20.52■□□□□ 0.88
FANCA-221ENST00000566889 SMPD2O60906 423 aa20.52■□□□□ 0.88
FANCA-221ENST00000566889 LEPROTL1O95214 131 aa20.52■□□□□ 0.88
FANCA-221ENST00000566889 OR5AL1P0C617 328 aa20.52■□□□□ 0.88
FANCA-221ENST00000566889 TP73-AS1Q9UF72 201 aa20.52■□□□□ 0.88
FANCA-221ENST00000566889 R4GN57 208 aa20.52■□□□□ 0.88
FANCA-221ENST00000566889 HIST1H1EP10412 219 aaKnown RBP20.51■□□□□ 0.87
FANCA-221ENST00000566889 MRPL49Q13405 166 aaKnown RBP20.51■□□□□ 0.87
FANCA-221ENST00000566889 MDP1Q86V88 176 aa20.51■□□□□ 0.87
FANCA-221ENST00000566889 SMRP1Q8NCR6 262 aa20.51■□□□□ 0.87
FANCA-221ENST00000566889 MRPL32Q9BYC8 188 aaKnown RBP20.51■□□□□ 0.87
FANCA-221ENST00000566889 IQCF6A8MYZ5 107 aa20.51■□□□□ 0.87
FANCA-221ENST00000566889 NBEAP1P0C6P0 100 aa20.51■□□□□ 0.87
FANCA-221ENST00000566889 GATA2P23769 480 aaPredicted RBP20.51■□□□□ 0.87
FANCA-221ENST00000566889 LTBRP36941 435 aa20.51■□□□□ 0.87
FANCA-221ENST00000566889 ACP7Q6ZNF0 438 aa20.51■□□□□ 0.87
FANCA-221ENST00000566889 NHLRC2Q8NBF2 726 aa20.51■□□□□ 0.87
FANCA-221ENST00000566889 PMCHL2Q9BQD1 86 aa20.51■□□□□ 0.87
FANCA-221ENST00000566889 SSBP4Q9BWG4 385 aaPredicted RBP20.51■□□□□ 0.87
FANCA-221ENST00000566889 TRAV8-6A0A0B4J262 113 aa20.5■□□□□ 0.87
FANCA-221ENST00000566889 IGHV1-24A0A0C4DH33 117 aa20.5■□□□□ 0.87
FANCA-221ENST00000566889 RNFT1Q5M7Z0 435 aa20.5■□□□□ 0.87
FANCA-221ENST00000566889 TCF24Q7RTU0 167 aa20.5■□□□□ 0.87
FANCA-221ENST00000566889 TMEM14BQ9NUH8 114 aa20.5■□□□□ 0.87
FANCA-221ENST00000566889 JPT1Q9UK76 154 aa20.5■□□□□ 0.87
FANCA-221ENST00000566889 IGHV3-64DA0A0J9YX35 117 aa20.5■□□□□ 0.87
FANCA-221ENST00000566889 WNT9BO14905 357 aa20.5■□□□□ 0.87
FANCA-221ENST00000566889 CYB561P49447 251 aa20.5■□□□□ 0.87
FANCA-221ENST00000566889 OR4S2Q8NH73 311 aa20.5■□□□□ 0.87
FANCA-221ENST00000566889 SLC25A33Q9BSK2 321 aa20.5■□□□□ 0.87
FANCA-221ENST00000566889 HCFC1P51610 2035 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms