RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 DFFBO76075 338 aa15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 JTBO76095 146 aa15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 CST7O76096 145 aa15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 CNIH1O95406 144 aa15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 HLA-DRB1P01911 266 aa15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 METTL15P1P0C7V9 234 aa15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 SUB1P53999 127 aaKnown RBP eCLIP15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 TMEM267Q0VDI3 215 aaPredicted RBP15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 ATP6V1FQ16864 119 aa15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 FBLN7Q53RD9 439 aa15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 ZNF562Q6V9R5 426 aa15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 C16orf82Q7Z2V1 217 aa15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 STOML3Q8TAV4 291 aa15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 SRSF12Q8WXF0 261 aaKnown RBP15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 PINX1Q96BK5 328 aaKnown RBP15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 RASL11BQ9BPW5 248 aa15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 SLC25A33Q9BSK2 321 aa15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 MOB4Q9Y3A3 225 aa15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 BORCS7-ASMTA0A0B4J1R7 106 aa15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 CGB1A6NKQ9 187 aa15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 M0QZK8 103 aa15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 OR8U8P0C7N1 319 aa15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 TPT1P13693 172 aaKnown RBP15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 NPY1RP25929 384 aa15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 SNCAP37840 140 aa15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 GNB1P62873 340 aa15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 IFITM2Q01629 132 aa15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 ZNF266Q14584 549 aa15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 DEFB112Q30KQ8 113 aa15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 BSXQ3C1V8 233 aa15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 C2orf83Q53S99 150 aa15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 C10orf55Q5SWW7 151 aa15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 C12orf54Q6X4T0 127 aa15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 OR10P1Q8NGE3 313 aa15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 OR5C1Q8NGR4 320 aa15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 OR5R1Q8NH85 324 aa15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 BSCL2Q96G97 398 aaPredicted RBP15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 PRDM13Q9H4Q3 707 aa15.15■□□□□ 0.02
CSPG4P13-201ENST00000565545 A6NDX4 124 aa15.14■□□□□ 0.01
CSPG4P13-201ENST00000565545 PMS2P5A8MQ11 134 aa15.14■□□□□ 0.01
CSPG4P13-201ENST00000565545 E7EUB6 86 aa15.14■□□□□ 0.01
CSPG4P13-201ENST00000565545 H3BUX3 64 aa15.14■□□□□ 0.01
CSPG4P13-201ENST00000565545 SSBP2P81877 361 aaPredicted RBP15.14■□□□□ 0.01
CSPG4P13-201ENST00000565545 FXYD3Q14802 87 aa15.14■□□□□ 0.01
CSPG4P13-201ENST00000565545 TMEM217Q8N7C4 229 aa15.14■□□□□ 0.01
CSPG4P13-201ENST00000565545 UBAC2Q8NBM4 344 aa15.14■□□□□ 0.01
CSPG4P13-201ENST00000565545 OR10W1Q8NGF6 305 aa15.14■□□□□ 0.01
CSPG4P13-201ENST00000565545 ST8SIA2Q92186 375 aa15.14■□□□□ 0.01
CSPG4P13-201ENST00000565545 SMIM3Q9BZL3 60 aa15.14■□□□□ 0.01
CSPG4P13-201ENST00000565545 PAIP2BQ9ULR5 123 aaKnown RBP15.14■□□□□ 0.01
CSPG4P13-201ENST00000565545 SOX21Q9Y651 276 aaPredicted RBP15.14■□□□□ 0.01
CSPG4P13-201ENST00000565545 A0A1B0GW64 132 aa15.13■□□□□ 0.01
CSPG4P13-201ENST00000565545 RGS13O14921 159 aa15.13■□□□□ 0.01
CSPG4P13-201ENST00000565545 IFNA7P01567 189 aa15.13■□□□□ 0.01
CSPG4P13-201ENST00000565545 SLC38A11Q08AI6 406 aa15.13■□□□□ 0.01
CSPG4P13-201ENST00000565545 TEX261Q6UWH6 196 aa15.13■□□□□ 0.01
CSPG4P13-201ENST00000565545 ETV3LQ6ZN32 361 aa15.13■□□□□ 0.01
CSPG4P13-201ENST00000565545 ZNF767PQ75MW2 155 aa15.13■□□□□ 0.01
CSPG4P13-201ENST00000565545 HAPLN4Q86UW8 402 aa15.13■□□□□ 0.01
CSPG4P13-201ENST00000565545 BCL6BQ8N143 479 aaPredicted RBP15.13■□□□□ 0.01
CSPG4P13-201ENST00000565545 ZNF114Q8NC26 417 aa15.13■□□□□ 0.01
CSPG4P13-201ENST00000565545 ATP5SQ99766 215 aa15.13■□□□□ 0.01
CSPG4P13-201ENST00000565545 GGACTQ9BVM4 153 aa15.13■□□□□ 0.01
CSPG4P13-201ENST00000565545 ANK2Q01484 3957 aa15.12■□□□□ 0.01
CSPG4P13-201ENST00000565545 IGLC7A0M8Q6 106 aa15.12■□□□□ 0.01
CSPG4P13-201ENST00000565545 TEX22C9J3V5 150 aa15.12■□□□□ 0.01
CSPG4P13-201ENST00000565545 PLXNB1O43157 2135 aa15.12■□□□□ 0.01
CSPG4P13-201ENST00000565545 OR13C7P0DN81 318 aa15.12■□□□□ 0.01
CSPG4P13-201ENST00000565545 RNASE2P10153 161 aaKnown RBP15.12■□□□□ 0.01
CSPG4P13-201ENST00000565545 WT1-ASQ06250 92 aa15.12■□□□□ 0.01
CSPG4P13-201ENST00000565545 ARL16Q0P5N6 197 aa15.12■□□□□ 0.01
CSPG4P13-201ENST00000565545 RPL7L1Q6DKI1 246 aaKnown RBP15.12■□□□□ 0.01
CSPG4P13-201ENST00000565545 OR8G2PQ6IF36 304 aa15.12■□□□□ 0.01
CSPG4P13-201ENST00000565545 Q6YL49 198 aa15.12■□□□□ 0.01
CSPG4P13-201ENST00000565545 BAP18Q8IXM2 172 aa15.12■□□□□ 0.01
CSPG4P13-201ENST00000565545 LILRB2Q8N423 598 aa15.12■□□□□ 0.01
CSPG4P13-201ENST00000565545 C5orf56Q8N8D9 126 aa15.12■□□□□ 0.01
CSPG4P13-201ENST00000565545 ARPC1AQ92747 370 aa15.12■□□□□ 0.01
CSPG4P13-201ENST00000565545 PHYHIPLQ96FC7 376 aa15.12■□□□□ 0.01
CSPG4P13-201ENST00000565545 WFDC1Q9HC57 220 aa15.12■□□□□ 0.01
CSPG4P13-201ENST00000565545 BTBD17A6NE02 478 aa15.11■□□□□ 0.01
CSPG4P13-201ENST00000565545 TSPAN9O75954 239 aa15.11■□□□□ 0.01
CSPG4P13-201ENST00000565545 IFNA5P01569 189 aa15.11■□□□□ 0.01
CSPG4P13-201ENST00000565545 IFNA4P05014 189 aa15.11■□□□□ 0.01
CSPG4P13-201ENST00000565545 IER3P46695 156 aa15.11■□□□□ 0.01
CSPG4P13-201ENST00000565545 CX3CL1P78423 397 aa15.11■□□□□ 0.01
CSPG4P13-201ENST00000565545 CLINT1Q14677 625 aa15.11■□□□□ 0.01
CSPG4P13-201ENST00000565545 EIF5AL1Q6IS14 154 aaKnown RBP15.11■□□□□ 0.01
CSPG4P13-201ENST00000565545 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.11■□□□□ 0.01
CSPG4P13-201ENST00000565545 ARV1Q9H2C2 271 aa15.11■□□□□ 0.01
CSPG4P13-201ENST00000565545 IGHV7-81A0A0B4J1V7 117 aa15.1■□□□□ 0.01
CSPG4P13-201ENST00000565545 DLK1P80370 383 aa15.1■□□□□ 0.01
CSPG4P13-201ENST00000565545 SCGB2A2Q13296 93 aa15.1■□□□□ 0.01
CSPG4P13-201ENST00000565545 ZNF680Q8NEM1 530 aa15.1■□□□□ 0.01
CSPG4P13-201ENST00000565545 OR1L6Q8NGR2 347 aa15.1■□□□□ 0.01
CSPG4P13-201ENST00000565545 RNASEH2CQ8TDP1 164 aaKnown RBP15.1■□□□□ 0.01
CSPG4P13-201ENST00000565545 TMEM170AQ8WVE7 144 aa15.1■□□□□ 0.01
CSPG4P13-201ENST00000565545 SSMEM1Q8WWF3 244 aa15.1■□□□□ 0.01
CSPG4P13-201ENST00000565545 TMEM147Q9BVK8 224 aa15.1■□□□□ 0.01
CSPG4P13-201ENST00000565545 PARD6GQ9BYG4 376 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms