RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 FANCD2OSQ96PS1 177 aa12.09□□□□□ -0.47
CDH11-209ENST00000564317 CITED1Q99966 193 aa12.09□□□□□ -0.47
CDH11-209ENST00000564317 MAGT1Q9H0U3 335 aa12.09□□□□□ -0.47
CDH11-209ENST00000564317 ZNF355PQ9NSJ1 428 aa12.09□□□□□ -0.47
CDH11-209ENST00000564317 GSKIPQ9P0R6 139 aa12.09□□□□□ -0.47
CDH11-209ENST00000564317 FAM90A26D6RGX4 464 aa12.08□□□□□ -0.48
CDH11-209ENST00000564317 H3BUA1 57 aa12.08□□□□□ -0.48
CDH11-209ENST00000564317 RAB9AP51151 201 aa12.08□□□□□ -0.48
CDH11-209ENST00000564317 ID3Q02535 119 aa12.08□□□□□ -0.48
CDH11-209ENST00000564317 IL15RAQ13261 267 aa12.08□□□□□ -0.48
CDH11-209ENST00000564317 FCN2Q15485 313 aa12.08□□□□□ -0.48
CDH11-209ENST00000564317 C18orf65Q6ZTR6 163 aa12.08□□□□□ -0.48
CDH11-209ENST00000564317 C3orf56Q8N813 242 aa12.08□□□□□ -0.48
CDH11-209ENST00000564317 WDR89Q96FK6 387 aaPredicted RBP12.08□□□□□ -0.48
CDH11-209ENST00000564317 C2orf50Q96LR7 162 aa12.08□□□□□ -0.48
CDH11-209ENST00000564317 P2RX4Q99571 388 aa12.08□□□□□ -0.48
CDH11-209ENST00000564317 ENY2Q9NPA8 101 aa12.08□□□□□ -0.48
CDH11-209ENST00000564317 MGAT4CQ9UBM8 478 aa12.08□□□□□ -0.48
CDH11-209ENST00000564317 F11RQ9Y624 299 aaKnown RBP12.08□□□□□ -0.48
CDH11-209ENST00000564317 TENM1Q9UKZ4 2725 aa12.07□□□□□ -0.48
CDH11-209ENST00000564317 IGLV11-55A0A075B6I3 123 aa12.07□□□□□ -0.48
CDH11-209ENST00000564317 TRBV9A0A0B4J1U6 114 aa12.07□□□□□ -0.48
CDH11-209ENST00000564317 TCRBV4S1A1TA0A5B7 111 aa12.07□□□□□ -0.48
CDH11-209ENST00000564317 ADARB2-AS1A8MUL3 147 aa12.07□□□□□ -0.48
CDH11-209ENST00000564317 BRI3O95415 125 aa12.07□□□□□ -0.48
CDH11-209ENST00000564317 SCGB1D2O95969 90 aa12.07□□□□□ -0.48
CDH11-209ENST00000564317 TRGV3P03979 118 aa12.07□□□□□ -0.48
CDH11-209ENST00000564317 RNASE2P10153 161 aaKnown RBP12.07□□□□□ -0.48
CDH11-209ENST00000564317 IAPPP10997 89 aa12.07□□□□□ -0.48
CDH11-209ENST00000564317 CXCL3P19876 107 aa12.07□□□□□ -0.48
CDH11-209ENST00000564317 NKX2-1P43699 371 aaPredicted RBP12.07□□□□□ -0.48
CDH11-209ENST00000564317 H2BFSP57053 126 aa12.07□□□□□ -0.48
CDH11-209ENST00000564317 TPPP2P59282 170 aa12.07□□□□□ -0.48
CDH11-209ENST00000564317 POLR2GP62487 172 aaKnown RBP eCLIP12.07□□□□□ -0.48
CDH11-209ENST00000564317 KLK9Q2XQG4 91 aa12.07□□□□□ -0.48
CDH11-209ENST00000564317 MRPL41Q8IXM3 137 aaKnown RBP12.07□□□□□ -0.48
CDH11-209ENST00000564317 ZNF114Q8NC26 417 aa12.07□□□□□ -0.48
CDH11-209ENST00000564317 DTD1Q8TEA8 209 aa12.07□□□□□ -0.48
CDH11-209ENST00000564317 CACFD1Q9UGQ2 172 aa12.07□□□□□ -0.48
CDH11-209ENST00000564317 KLK9Q9UKQ9 250 aa12.07□□□□□ -0.48
CDH11-209ENST00000564317 SYNGR2O43760 224 aa12.06□□□□□ -0.48
CDH11-209ENST00000564317 OR2J3O76001 311 aa12.06□□□□□ -0.48
CDH11-209ENST00000564317 MBPP02686 304 aaPredicted RBP12.06□□□□□ -0.48
CDH11-209ENST00000564317 RPL23AP62750 156 aaKnown RBP12.06□□□□□ -0.48
CDH11-209ENST00000564317 ERHP84090 104 aaKnown RBP12.06□□□□□ -0.48
CDH11-209ENST00000564317 RHOGP84095 191 aa12.06□□□□□ -0.48
CDH11-209ENST00000564317 BSXQ3C1V8 233 aa12.06□□□□□ -0.48
CDH11-209ENST00000564317 KHDC1LQ5JSQ8 128 aa12.06□□□□□ -0.48
CDH11-209ENST00000564317 TMEM65Q6PI78 240 aa12.06□□□□□ -0.48
CDH11-209ENST00000564317 Q6ZNX1 250 aa12.06□□□□□ -0.48
CDH11-209ENST00000564317 ZNF491Q8N8L2 437 aa12.06□□□□□ -0.48
CDH11-209ENST00000564317 OR11H7Q8NGC8 314 aa12.06□□□□□ -0.48
CDH11-209ENST00000564317 TMEM170AQ8WVE7 144 aa12.06□□□□□ -0.48
CDH11-209ENST00000564317 MED28Q9H204 178 aa12.06□□□□□ -0.48
CDH11-209ENST00000564317 SLA2Q9H6Q3 261 aa12.06□□□□□ -0.48
CDH11-209ENST00000564317 GNB4Q9HAV0 340 aa12.06□□□□□ -0.48
CDH11-209ENST00000564317 HEYLQ9NQ87 328 aaPredicted RBP12.06□□□□□ -0.48
CDH11-209ENST00000564317 RCL1Q9Y2P8 373 aaKnown RBP12.06□□□□□ -0.48
CDH11-209ENST00000564317 A0A1W2PRX2 142 aa12.05□□□□□ -0.48
CDH11-209ENST00000564317 MED6O75586 246 aa12.05□□□□□ -0.48
CDH11-209ENST00000564317 NDUFB8O95169 186 aa12.05□□□□□ -0.48
CDH11-209ENST00000564317 DEFA4P12838 97 aa12.05□□□□□ -0.48
CDH11-209ENST00000564317 PVRIGQ6DKI7 326 aa12.05□□□□□ -0.48
CDH11-209ENST00000564317 OR1P1Q8NH06 330 aa12.05□□□□□ -0.48
CDH11-209ENST00000564317 TSSC4Q9Y5U2 329 aaPredicted RBP12.05□□□□□ -0.48
CDH11-209ENST00000564317 K7EPK0 472 aa12.04□□□□□ -0.48
CDH11-209ENST00000564317 SSSCA1O60232 199 aa12.04□□□□□ -0.48
CDH11-209ENST00000564317 TMEM50AO95807 157 aa12.04□□□□□ -0.48
CDH11-209ENST00000564317 IGHV3-11P01762 117 aa12.04□□□□□ -0.48
CDH11-209ENST00000564317 RRAS2P62070 204 aaPredicted RBP12.04□□□□□ -0.48
CDH11-209ENST00000564317 SLC25A24Q6NUK1 477 aa12.04□□□□□ -0.48
CDH11-209ENST00000564317 SHISA2Q6UWI4 295 aa12.04□□□□□ -0.48
CDH11-209ENST00000564317 NECAP1Q8NC96 275 aa12.04□□□□□ -0.48
CDH11-209ENST00000564317 SLC24A4Q8NFF2 622 aa12.04□□□□□ -0.48
CDH11-209ENST00000564317 HIPK2Q9H2X6 1198 aa12.04□□□□□ -0.48
CDH11-209ENST00000564317 FBXL7Q9UJT9 491 aa12.04□□□□□ -0.48
CDH11-209ENST00000564317 STAB1Q9NY15 2570 aa12.03□□□□□ -0.48
CDH11-209ENST00000564317 FAM223BA6NKX1 122 aa12.03□□□□□ -0.48
CDH11-209ENST00000564317 WRBO00258 174 aa12.03□□□□□ -0.48
CDH11-209ENST00000564317 HIST1H1BP16401 226 aaKnown RBP12.03□□□□□ -0.48
CDH11-209ENST00000564317 SNCAP37840 140 aa12.03□□□□□ -0.48
CDH11-209ENST00000564317 PAX9P55771 341 aa12.03□□□□□ -0.48
CDH11-209ENST00000564317 RAB32Q13637 225 aa12.03□□□□□ -0.48
CDH11-209ENST00000564317 NSUN5P1Q3KNT7 163 aa12.03□□□□□ -0.48
CDH11-209ENST00000564317 NDUFA11Q86Y39 141 aa12.03□□□□□ -0.48
CDH11-209ENST00000564317 FAM223AQ8IWN6 122 aa12.03□□□□□ -0.48
CDH11-209ENST00000564317 UBE2E2Q96LR5 201 aa12.03□□□□□ -0.48
CDH11-209ENST00000564317 OR5B12Q96R08 314 aa12.03□□□□□ -0.48
CDH11-209ENST00000564317 OR4C12Q96R67 309 aa12.03□□□□□ -0.48
CDH11-209ENST00000564317 NMES1Q9C002 83 aa12.03□□□□□ -0.48
CDH11-209ENST00000564317 C11orf1Q9H5F2 150 aa12.03□□□□□ -0.48
CDH11-209ENST00000564317 ZFP57Q9NU63 452 aa12.03□□□□□ -0.48
CDH11-209ENST00000564317 LSM5Q9Y4Y9 91 aaKnown RBP12.03□□□□□ -0.48
CDH11-209ENST00000564317 S4R3C0 116 aa12.03□□□□□ -0.48
CDH11-209ENST00000564317 IGHV3-21A0A0B4J1V1 117 aa12.02□□□□□ -0.49
CDH11-209ENST00000564317 MFSD2BA6NFX1 497 aa12.02□□□□□ -0.49
CDH11-209ENST00000564317 C15orf62A8K5M9 175 aa12.02□□□□□ -0.49
CDH11-209ENST00000564317 H3BP45 60 aa12.02□□□□□ -0.49
CDH11-209ENST00000564317 K7EIM0 57 aa12.02□□□□□ -0.49
CDH11-209ENST00000564317 NPY1RP25929 384 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms