RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 ZNF414Q96IQ9 312 aa17.72■□□□□ 0.43
NME3-206ENST00000564252 TMEM14BQ9NUH8 114 aa17.72■□□□□ 0.43
NME3-206ENST00000564252 PRNDQ9UKY0 176 aa17.72■□□□□ 0.43
NME3-206ENST00000564252 IGHV3OR16-8A0A075B7F1 116 aa17.71■□□□□ 0.43
NME3-206ENST00000564252 K7EMT4 169 aa17.71■□□□□ 0.43
NME3-206ENST00000564252 APOC4P55056 127 aa17.71■□□□□ 0.43
NME3-206ENST00000564252 UBAC2Q8NBM4 344 aa17.71■□□□□ 0.43
NME3-206ENST00000564252 TMEM56Q96MV1 263 aa17.71■□□□□ 0.43
NME3-206ENST00000564252 C20orf24Q9BUV8 137 aa17.71■□□□□ 0.43
NME3-206ENST00000564252 FKBP11Q9NYL4 201 aa17.71■□□□□ 0.43
NME3-206ENST00000564252 A0A0J9YWU9 116 aa17.7■□□□□ 0.42
NME3-206ENST00000564252 C15orf61A6NNL5 157 aa17.7■□□□□ 0.42
NME3-206ENST00000564252 ZNF207O43670 478 aaKnown RBP17.7■□□□□ 0.42
NME3-206ENST00000564252 EIF4EP06730 217 aaKnown RBP17.7■□□□□ 0.42
NME3-206ENST00000564252 HLA-DMAP28067 261 aa17.7■□□□□ 0.42
NME3-206ENST00000564252 EWSR1Q01844 656 aaKnown RBP eCLIP17.7■□□□□ 0.42
NME3-206ENST00000564252 DEFB135Q30KP9 77 aa17.7■□□□□ 0.42
NME3-206ENST00000564252 PHLDA2Q53GA4 152 aa17.7■□□□□ 0.42
NME3-206ENST00000564252 Q56UQ5 140 aa17.7■□□□□ 0.42
NME3-206ENST00000564252 GPX8Q8TED1 209 aa17.7■□□□□ 0.42
NME3-206ENST00000564252 UBE2CO00762 179 aa17.69■□□□□ 0.42
NME3-206ENST00000564252 SPRY2O43597 315 aa17.69■□□□□ 0.42
NME3-206ENST00000564252 CTSGP08311 255 aa17.69■□□□□ 0.42
NME3-206ENST00000564252 BMI1P35226 326 aa17.69■□□□□ 0.42
NME3-206ENST00000564252 TNFRSF9Q07011 255 aa17.69■□□□□ 0.42
NME3-206ENST00000564252 OR1P1Q8NH06 330 aa17.69■□□□□ 0.42
NME3-206ENST00000564252 SLC25A46Q96AG3 418 aa17.69■□□□□ 0.42
NME3-206ENST00000564252 TSC22D3Q99576 134 aa17.69■□□□□ 0.42
NME3-206ENST00000564252 FAM212BQ9NTI7 297 aaPredicted RBP17.69■□□□□ 0.42
NME3-206ENST00000564252 KIR2DL5BA0A0G2JN68 375 aa17.68■□□□□ 0.42
NME3-206ENST00000564252 KIR2DL5BA0A0G2JPC4 375 aa17.68■□□□□ 0.42
NME3-206ENST00000564252 OR4C46A6NHA9 309 aa17.68■□□□□ 0.42
NME3-206ENST00000564252 C15orf62A8K5M9 175 aa17.68■□□□□ 0.42
NME3-206ENST00000564252 PMS2P11Q13670 270 aa17.68■□□□□ 0.42
NME3-206ENST00000564252 LYG2Q86SG7 212 aa17.68■□□□□ 0.42
NME3-206ENST00000564252 KIR2DL5AQ8N109 375 aa17.68■□□□□ 0.42
NME3-206ENST00000564252 KIR2DL5BQ8NHK3 375 aa17.68■□□□□ 0.42
NME3-206ENST00000564252 LINC00476Q8WZB0 136 aa17.68■□□□□ 0.42
NME3-206ENST00000564252 SEC22AQ96IW7 307 aa17.68■□□□□ 0.42
NME3-206ENST00000564252 KMT2AQ03164 3969 aa17.67■□□□□ 0.42
NME3-206ENST00000564252 IGKV1-39P01597 117 aa17.67■□□□□ 0.42
NME3-206ENST00000564252 IGKV1D-39P04432 117 aa17.67■□□□□ 0.42
NME3-206ENST00000564252 CTSDP07339 412 aaPredicted RBP17.67■□□□□ 0.42
NME3-206ENST00000564252 TBC1D26Q86UD7 250 aa17.67■□□□□ 0.42
NME3-206ENST00000564252 SMPXQ9UHP9 88 aa17.67■□□□□ 0.42
NME3-206ENST00000564252 CXorf65A6NEN9 183 aa17.66■□□□□ 0.42
NME3-206ENST00000564252 I3L2K1 104 aa17.66■□□□□ 0.42
NME3-206ENST00000564252 TSPAN5P62079 268 aa17.66■□□□□ 0.42
NME3-206ENST00000564252 LPCAT3Q6P1A2 487 aa17.66■□□□□ 0.42
NME3-206ENST00000564252 RNF183Q96D59 192 aa17.66■□□□□ 0.42
NME3-206ENST00000564252 FRAS1Q86XX4 4008 aa17.66■□□□□ 0.42
NME3-206ENST00000564252 RPL35AP18077 110 aaKnown RBP17.65■□□□□ 0.42
NME3-206ENST00000564252 S100GP29377 79 aa17.65■□□□□ 0.42
NME3-206ENST00000564252 FCGR2BP31994 310 aaPredicted RBP17.65■□□□□ 0.42
NME3-206ENST00000564252 RELQ04864 619 aaPredicted RBP17.65■□□□□ 0.42
NME3-206ENST00000564252 STPG3Q8N7X2 389 aa17.65■□□□□ 0.42
NME3-206ENST00000564252 ZNF114Q8NC26 417 aa17.65■□□□□ 0.42
NME3-206ENST00000564252 OR10C1Q96KK4 312 aa17.65■□□□□ 0.42
NME3-206ENST00000564252 RNF2Q99496 336 aa17.65■□□□□ 0.42
NME3-206ENST00000564252 SCPEP1Q9HB40 452 aa17.65■□□□□ 0.42
NME3-206ENST00000564252 VCX3AQ9NNX9 186 aa17.65■□□□□ 0.42
NME3-206ENST00000564252 COMMD3Q9UBI1 195 aa17.65■□□□□ 0.42
NME3-206ENST00000564252 A0A087WXM4 84 aa17.64■□□□□ 0.41
NME3-206ENST00000564252 IGHV7-4-1A0A0J9YVY3 117 aa17.64■□□□□ 0.41
NME3-206ENST00000564252 CHEK1O14757 476 aa17.64■□□□□ 0.41
NME3-206ENST00000564252 APOA1P02647 267 aa17.64■□□□□ 0.41
NME3-206ENST00000564252 UCP3P55916 312 aa17.64■□□□□ 0.41
NME3-206ENST00000564252 PRCDQ00LT1 54 aa17.64■□□□□ 0.41
NME3-206ENST00000564252 H2BFWTQ7Z2G1 175 aa17.64■□□□□ 0.41
NME3-206ENST00000564252 OR4A16Q8NH70 328 aa17.64■□□□□ 0.41
NME3-206ENST00000564252 MISP3Q96FF7 219 aa17.64■□□□□ 0.41
NME3-206ENST00000564252 GALNT14Q96FL9 552 aa17.64■□□□□ 0.41
NME3-206ENST00000564252 CMTM3Q96MX0 182 aa17.64■□□□□ 0.41
NME3-206ENST00000564252 RHPN1-AS1Q9BWJ2 59 aa17.64■□□□□ 0.41
NME3-206ENST00000564252 NUPR2A6NF83 97 aa17.63■□□□□ 0.41
NME3-206ENST00000564252 NUPL2O15504 423 aaKnown RBP17.63■□□□□ 0.41
NME3-206ENST00000564252 MFAP4P55083 255 aa17.63■□□□□ 0.41
NME3-206ENST00000564252 SNX29P2Q8IUI4 249 aa17.63■□□□□ 0.41
NME3-206ENST00000564252 TXN2Q99757 166 aa17.63■□□□□ 0.41
NME3-206ENST00000564252 MAP6D1Q9H9H5 199 aa17.63■□□□□ 0.41
NME3-206ENST00000564252 SMIM31A0A1B0GVY4 71 aa17.62■□□□□ 0.41
NME3-206ENST00000564252 MT-CO2P00403 227 aa17.62■□□□□ 0.41
NME3-206ENST00000564252 ATF4P18848 351 aaPredicted RBP17.62■□□□□ 0.41
NME3-206ENST00000564252 RCVRNP35243 200 aa17.62■□□□□ 0.41
NME3-206ENST00000564252 NCS1P62166 190 aa17.62■□□□□ 0.41
NME3-206ENST00000564252 APRG1Q8IVJ8 170 aa17.62■□□□□ 0.41
NME3-206ENST00000564252 TMEM116Q8NCL8 245 aa17.62■□□□□ 0.41
NME3-206ENST00000564252 MRGPRFQ96AM1 343 aa17.62■□□□□ 0.41
NME3-206ENST00000564252 NXF2Q9GZY0 626 aaKnown RBP17.62■□□□□ 0.41
NME3-206ENST00000564252 IGHV3-49A0A0A0MS15 119 aa17.61■□□□□ 0.41
NME3-206ENST00000564252 YIF1AO95070 293 aa17.61■□□□□ 0.41
NME3-206ENST00000564252 ELK1P19419 428 aa17.61■□□□□ 0.41
NME3-206ENST00000564252 HSPE1P61604 102 aaKnown RBP17.61■□□□□ 0.41
NME3-206ENST00000564252 CEMP1Q6PRD7 247 aaPredicted RBP17.61■□□□□ 0.41
NME3-206ENST00000564252 TNFAIP8O95379 198 aa17.6■□□□□ 0.41
NME3-206ENST00000564252 LY6G6CO95867 125 aa17.6■□□□□ 0.41
NME3-206ENST00000564252 IGHV3-48P01763 117 aa17.6■□□□□ 0.41
NME3-206ENST00000564252 ZNF124Q15973 351 aa17.6■□□□□ 0.41
NME3-206ENST00000564252 TRAV14DV4A0A0A6YYC5 116 aa17.59■□□□□ 0.41
NME3-206ENST00000564252 HPGDSO60760 199 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms