RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 SLC35B3Q9H1N7 401 aa2.89□□□□□ -1.95
GDE1-202ENST00000563645 C5orf66Q9H5L9 145 aa2.89□□□□□ -1.95
GDE1-202ENST00000563645 DOCK5Q9H7D0 1870 aa2.89□□□□□ -1.95
GDE1-202ENST00000563645 JPT2Q9H910 190 aa2.89□□□□□ -1.95
GDE1-202ENST00000563645 PHPT1Q9NRX4 125 aaPredicted RBP2.89□□□□□ -1.95
GDE1-202ENST00000563645 AK3Q9UIJ7 227 aa2.89□□□□□ -1.95
GDE1-202ENST00000563645 PARP4Q9UKK3 1724 aaKnown RBP2.89□□□□□ -1.95
GDE1-202ENST00000563645 LSM2Q9Y333 95 aaKnown RBP2.89□□□□□ -1.95
GDE1-202ENST00000563645 MED31Q9Y3C7 131 aa2.89□□□□□ -1.95
GDE1-202ENST00000563645 LRP5O75197 1615 aa2.89□□□□□ -1.95
GDE1-202ENST00000563645 A2ML1A8K2U0 1454 aa2.89□□□□□ -1.95
GDE1-202ENST00000563645 TNRC6AQ8NDV7 1962 aaKnown RBP2.89□□□□□ -1.95
GDE1-202ENST00000563645 AFDNP55196 1824 aaKnown RBP2.89□□□□□ -1.95
GDE1-202ENST00000563645 CCDC88CQ9P219 2028 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 NUP188Q5SRE5 1749 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 SAMD9LQ8IVG5 1584 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 LAMB1P07942 1786 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 ADAMTSL1Q8N6G6 1762 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 TSPAN11A1L157 253 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 RBFOX3A6NFN3 312 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 TLCD2A6NGC4 264 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 APOC4-APOC2K7ER74 178 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 EEF1E1O43324 174 aaKnown RBP2.88□□□□□ -1.95
GDE1-202ENST00000563645 PROSCO94903 275 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 IGHMP01871 453 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 TTRP02766 147 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 LINC00869P0C866 280 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 SP9P0CG40 484 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 CRYBB3P26998 211 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 MAGEA5P43359 124 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 VDAC2P45880 294 aaPredicted RBP2.88□□□□□ -1.95
GDE1-202ENST00000563645 H2BFSP57053 126 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 OSTNP61366 133 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 SEC11AP67812 179 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 ADIRFQ15847 76 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 TCEAL5Q5H9L2 206 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 DMRTC1Q5HYR2 192 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 PAGE3Q5JUK9 113 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 CDC42EP5Q6NZY7 148 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 TRIM40Q6P9F5 258 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 ZNF880Q6PDB4 577 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 DPPA3Q6W0C5 159 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 SHISA6Q6ZSJ9 500 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 COMMD6Q7Z4G1 85 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 CEACAM19Q7Z692 300 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 ATOH7Q8N100 152 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 C10orf111Q8N326 155 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 GPD1LQ8N335 351 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 TOMM5Q8N4H5 51 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 WDR31Q8NA23 367 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 SUMF1Q8NBK3 374 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 OR11H6Q8NGC7 330 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 PPTC7Q8NI37 304 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 VSTM2AQ8TAG5 236 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 PIFOQ8TCI5 191 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 POP5Q969H6 163 aaKnown RBP2.88□□□□□ -1.95
GDE1-202ENST00000563645 NEURL3Q96EH8 262 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 CARD19Q96LW7 228 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 KIR2DL4Q99706 377 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 C1orf123Q9NWV4 160 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 TVP23BQ9NYZ1 205 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 TECRQ9NZ01 308 aaKnown RBP2.88□□□□□ -1.95
GDE1-202ENST00000563645 SLC2A6Q9UGQ3 507 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 LSM7Q9UK45 103 aaKnown RBP2.88□□□□□ -1.95
GDE1-202ENST00000563645 COQ4Q9Y3A0 265 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 TMED7Q9Y3B3 224 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 MAP3K4Q9Y6R4 1608 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 ZFC3H1O60293 1989 aaKnown RBP2.88□□□□□ -1.95
GDE1-202ENST00000563645 DOCK2Q92608 1830 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 PDCD11Q14690 1871 aaKnown RBP2.88□□□□□ -1.95
GDE1-202ENST00000563645 NEXMIFQ5QGS0 1516 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 C4AP0C0L4 1744 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 C4BP0C0L5 1744 aa2.88□□□□□ -1.95
GDE1-202ENST00000563645 LAMB2P55268 1798 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 TRBV6-7A0A0A0MS04 114 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 TMED7-TICAM2A0A0A6YYA0 188 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 MUC21A0A0G2JKD1 596 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 MUC21A0A140T8X8 626 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 DAPL1A0PJW8 107 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 GGTLC3B5MD39 225 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 F8W1H4 67 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 TMEM250H0YL14 139 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 LY6LH3BQJ8 138 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 GABARAPH6UMI1 98 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 FXYD1O00168 92 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 NUPR1O60356 82 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 KLF7O75840 302 aaPredicted RBP2.87□□□□□ -1.95
GDE1-202ENST00000563645 CA1P00915 261 aaPredicted RBP2.87□□□□□ -1.95
GDE1-202ENST00000563645 TNFP01375 233 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 IL3P08700 152 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 H2BFMP0C1H6 154 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 PIPP12273 146 aaPredicted RBP2.87□□□□□ -1.95
GDE1-202ENST00000563645 IFITM1P13164 125 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 ELK1P19419 428 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 PPIBP23284 216 aaKnown RBP2.87□□□□□ -1.95
GDE1-202ENST00000563645 GPR183P32249 361 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 OPRM1P35372 400 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 RPL13AP40429 203 aaKnown RBP2.87□□□□□ -1.95
GDE1-202ENST00000563645 KIR2DS2P43631 304 aa2.87□□□□□ -1.95
GDE1-202ENST00000563645 NMUP48645 174 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms