RNA–Protein interactions for RNA: ENST00000563180.1

IRF8-203, Transcript of interferon regulatory factor 8, humanhuman

TSL 1 (best) BASIC

Gene IRF8, Length 1,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-203ENST00000563180 CACNG5Q9UF02 275 aa13.24□□□□□ -0.29
IRF8-203ENST00000563180 SHPKQ9UHJ6 478 aa13.24□□□□□ -0.29
IRF8-203ENST00000563180 KLK9Q9UKQ9 250 aa13.24□□□□□ -0.29
IRF8-203ENST00000563180 IGLV11-55A0A075B6I3 123 aa13.23□□□□□ -0.29
IRF8-203ENST00000563180 TCRBP04435 133 aa13.23□□□□□ -0.29
IRF8-203ENST00000563180 OR8U8P0C7N1 319 aa13.23□□□□□ -0.29
IRF8-203ENST00000563180 IGLL1P15814 213 aa13.23□□□□□ -0.29
IRF8-203ENST00000563180 ANXA7P20073 488 aaKnown RBP13.23□□□□□ -0.29
IRF8-203ENST00000563180 IFITM3Q01628 133 aa13.23□□□□□ -0.29
IRF8-203ENST00000563180 ASAH1Q13510 395 aa13.23□□□□□ -0.29
IRF8-203ENST00000563180 EXOSC2Q13868 293 aaKnown RBP13.23□□□□□ -0.29
IRF8-203ENST00000563180 C15orf32Q32M92 178 aa13.23□□□□□ -0.29
IRF8-203ENST00000563180 SLC25A24Q6NUK1 477 aa13.23□□□□□ -0.29
IRF8-203ENST00000563180 PLEKHA3Q9HB20 300 aa13.23□□□□□ -0.29
IRF8-203ENST00000563180 DMRT1Q9Y5R6 373 aa13.23□□□□□ -0.29
IRF8-203ENST00000563180 FAM240BA0A1B0GVZ2 78 aa13.22□□□□□ -0.29
IRF8-203ENST00000563180 C9orf170A2RU37 121 aa13.22□□□□□ -0.29
IRF8-203ENST00000563180 G3V4G9 280 aa13.22□□□□□ -0.29
IRF8-203ENST00000563180 CYB5BO43169 146 aa13.22□□□□□ -0.29
IRF8-203ENST00000563180 OR4E1P0C645 316 aa13.22□□□□□ -0.29
IRF8-203ENST00000563180 SLURP1P55000 103 aa13.22□□□□□ -0.29
IRF8-203ENST00000563180 OXLD1Q5BKU9 147 aa13.22□□□□□ -0.29
IRF8-203ENST00000563180 C1QL4Q86Z23 238 aa13.22□□□□□ -0.29
IRF8-203ENST00000563180 OR2C3Q8N628 320 aa13.22□□□□□ -0.29
IRF8-203ENST00000563180 LRTM2Q8N967 370 aa13.22□□□□□ -0.29
IRF8-203ENST00000563180 C20orf85Q9H1P6 137 aa13.22□□□□□ -0.29
IRF8-203ENST00000563180 RANGRFQ9HD47 186 aaPredicted RBP13.22□□□□□ -0.29
IRF8-203ENST00000563180 PEF1Q9UBV8 284 aaKnown RBP13.22□□□□□ -0.29
IRF8-203ENST00000563180 F11RQ9Y624 299 aaKnown RBP13.22□□□□□ -0.29
IRF8-203ENST00000563180 S4R3C0 116 aa13.22□□□□□ -0.29
IRF8-203ENST00000563180 TRAV6A0A075B6T7 132 aa13.21□□□□□ -0.29
IRF8-203ENST00000563180 PIGBOS1A0A0B4J2F0 54 aa13.21□□□□□ -0.29
IRF8-203ENST00000563180 TRBV12-3P01733 135 aa13.21□□□□□ -0.29
IRF8-203ENST00000563180 HLA-AP01891 365 aaKnown RBP13.21□□□□□ -0.29
IRF8-203ENST00000563180 SULT1A3P0DMM9 295 aa13.21□□□□□ -0.29
IRF8-203ENST00000563180 SULT1A4P0DMN0 295 aa13.21□□□□□ -0.29
IRF8-203ENST00000563180 MFAP2P55001 183 aa13.21□□□□□ -0.29
IRF8-203ENST00000563180 ERHP84090 104 aaKnown RBP13.21□□□□□ -0.29
IRF8-203ENST00000563180 C4orf46Q504U0 113 aa13.21□□□□□ -0.29
IRF8-203ENST00000563180 NMSQ5H8A3 153 aa13.21□□□□□ -0.29
IRF8-203ENST00000563180 DCUN1D4Q92564 292 aa13.21□□□□□ -0.29
IRF8-203ENST00000563180 RCC1LQ96I51 464 aaKnown RBP13.21□□□□□ -0.29
IRF8-203ENST00000563180 DUXBA0A1W2PPF3 345 aa13.2□□□□□ -0.3
IRF8-203ENST00000563180 IGHV3-23P01764 117 aa13.2□□□□□ -0.3
IRF8-203ENST00000563180 SPCS3P61009 180 aa13.2□□□□□ -0.3
IRF8-203ENST00000563180 DHRS2Q13268 280 aa13.2□□□□□ -0.3
IRF8-203ENST00000563180 SMCO1Q147U7 214 aa13.2□□□□□ -0.3
IRF8-203ENST00000563180 AARDQ4LEZ3 155 aa13.2□□□□□ -0.3
IRF8-203ENST00000563180 LYG2Q86SG7 212 aa13.2□□□□□ -0.3
IRF8-203ENST00000563180 DLX4Q92988 240 aaPredicted RBP13.2□□□□□ -0.3
IRF8-203ENST00000563180 ENY2Q9NPA8 101 aa13.2□□□□□ -0.3
IRF8-203ENST00000563180 THYN1Q9P016 225 aa13.2□□□□□ -0.3
IRF8-203ENST00000563180 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.2□□□□□ -0.3
IRF8-203ENST00000563180 MFSD2BA6NFX1 497 aa13.2□□□□□ -0.3
IRF8-203ENST00000563180 NXPH3O95157 252 aa13.2□□□□□ -0.3
IRF8-203ENST00000563180 HOXB5P09067 269 aa13.2□□□□□ -0.3
IRF8-203ENST00000563180 HOXA1P49639 335 aaPredicted RBP13.2□□□□□ -0.3
IRF8-203ENST00000563180 SAMD5Q5TGI4 173 aa13.2□□□□□ -0.3
IRF8-203ENST00000563180 OR1L6Q8NGR2 347 aa13.2□□□□□ -0.3
IRF8-203ENST00000563180 OR1P1Q8NH06 330 aa13.2□□□□□ -0.3
IRF8-203ENST00000563180 OR52E5Q8NH55 327 aa13.2□□□□□ -0.3
IRF8-203ENST00000563180 EEF1AKMT3Q96AZ1 226 aa13.2□□□□□ -0.3
IRF8-203ENST00000563180 NUDT15Q9NV35 164 aa13.2□□□□□ -0.3
IRF8-203ENST00000563180 A0A1B0GU03 582 aa13.19□□□□□ -0.3
IRF8-203ENST00000563180 H2AFB2P0C5Z0 115 aa13.19□□□□□ -0.3
IRF8-203ENST00000563180 ZP3P21754 424 aa13.19□□□□□ -0.3
IRF8-203ENST00000563180 HOXD3P31249 432 aaPredicted RBP13.19□□□□□ -0.3
IRF8-203ENST00000563180 SNCAP37840 140 aa13.19□□□□□ -0.3
IRF8-203ENST00000563180 OR52B4Q8NGK2 314 aa13.19□□□□□ -0.3
IRF8-203ENST00000563180 OR1S1Q8NH92 325 aa13.19□□□□□ -0.3
IRF8-203ENST00000563180 COQ8AQ8NI60 647 aa13.19□□□□□ -0.3
IRF8-203ENST00000563180 CXorf58Q96LI9 332 aa13.19□□□□□ -0.3
IRF8-203ENST00000563180 MCRIP2Q9BUT9 160 aaKnown RBP13.19□□□□□ -0.3
IRF8-203ENST00000563180 IGHV3-21A0A0B4J1V1 117 aa13.18□□□□□ -0.3
IRF8-203ENST00000563180 CEBPZOSA8MTT3 80 aa13.18□□□□□ -0.3
IRF8-203ENST00000563180 INS-IGF2F8WCM5 200 aa13.18□□□□□ -0.3
IRF8-203ENST00000563180 OVOL1O14753 267 aa13.18□□□□□ -0.3
IRF8-203ENST00000563180 DUS4LO95620 317 aaKnown RBP13.18□□□□□ -0.3
IRF8-203ENST00000563180 CLEC19AQ6UXS0 136 aa13.18□□□□□ -0.3
IRF8-203ENST00000563180 ZNF114Q8NC26 417 aa13.18□□□□□ -0.3
IRF8-203ENST00000563180 ENKURQ8TC29 256 aa13.18□□□□□ -0.3
IRF8-203ENST00000563180 MISP3Q96FF7 219 aa13.18□□□□□ -0.3
IRF8-203ENST00000563180 CCDC140Q96MF4 163 aa13.18□□□□□ -0.3
IRF8-203ENST00000563180 TMED3Q9Y3Q3 217 aa13.18□□□□□ -0.3
IRF8-203ENST00000563180 TRBV7-1A0A0A6YYK4 115 aa13.17□□□□□ -0.3
IRF8-203ENST00000563180 PPP5D1E7EU14 171 aa13.17□□□□□ -0.3
IRF8-203ENST00000563180 BMPR1BO00238 502 aa13.17□□□□□ -0.3
IRF8-203ENST00000563180 PDLIM3Q53GG5 364 aaPredicted RBP13.17□□□□□ -0.3
IRF8-203ENST00000563180 FAM209BQ5JX69 171 aa13.17□□□□□ -0.3
IRF8-203ENST00000563180 GGNBP1Q5YKI7 109 aa13.17□□□□□ -0.3
IRF8-203ENST00000563180 VN1R17PQ8TDU5 208 aa13.17□□□□□ -0.3
IRF8-203ENST00000563180 HEYLQ9NQ87 328 aaPredicted RBP13.17□□□□□ -0.3
IRF8-203ENST00000563180 CACFD1Q9UGQ2 172 aa13.17□□□□□ -0.3
IRF8-203ENST00000563180 NOTCH3Q9UM47 2321 aa13.17□□□□□ -0.3
IRF8-203ENST00000563180 SEC14L6B5MCN3 397 aa13.16□□□□□ -0.3
IRF8-203ENST00000563180 ADAP1O75689 374 aa13.16□□□□□ -0.3
IRF8-203ENST00000563180 RNASE2P10153 161 aaKnown RBP13.16□□□□□ -0.3
IRF8-203ENST00000563180 SUB1P53999 127 aaKnown RBP eCLIP13.16□□□□□ -0.3
IRF8-203ENST00000563180 DEFA1P59665 94 aa13.16□□□□□ -0.3
IRF8-203ENST00000563180 DEFA3P59666 94 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms