RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ISLRO14498 428 aa10.68□□□□□ -0.7
USB1-207ENST00000563149 ACTL6BO94805 426 aa10.68□□□□□ -0.7
USB1-207ENST00000563149 C8orf88P0DMB2 117 aa10.68□□□□□ -0.7
USB1-207ENST00000563149 RNASE2P10153 161 aaKnown RBP10.68□□□□□ -0.7
USB1-207ENST00000563149 CRYBB3P26998 211 aa10.68□□□□□ -0.7
USB1-207ENST00000563149 GNG10P50151 68 aa10.68□□□□□ -0.7
USB1-207ENST00000563149 CX3CL1P78423 397 aa10.68□□□□□ -0.7
USB1-207ENST00000563149 MEF2CQ06413 473 aaPredicted RBP10.68□□□□□ -0.7
USB1-207ENST00000563149 CD69Q07108 199 aa10.68□□□□□ -0.7
USB1-207ENST00000563149 KRTCAP3Q53RY4 240 aa10.68□□□□□ -0.7
USB1-207ENST00000563149 CENPWQ5EE01 88 aa10.68□□□□□ -0.7
USB1-207ENST00000563149 ZNF833PQ6ZTB9 187 aa10.68□□□□□ -0.7
USB1-207ENST00000563149 CCL13Q99616 98 aa10.68□□□□□ -0.7
USB1-207ENST00000563149 FREM2Q5SZK8 3169 aa10.68□□□□□ -0.7
USB1-207ENST00000563149 TANC2Q9HCD6 1990 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 ZNF705FA8MVS1 300 aaPredicted RBP10.67□□□□□ -0.7
USB1-207ENST00000563149 SNURFLB1AK76 121 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 APOA2P02652 100 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 ZNF705DP0CH99 300 aaPredicted RBP10.67□□□□□ -0.7
USB1-207ENST00000563149 ZNF705BP0CI00 300 aaPredicted RBP10.67□□□□□ -0.7
USB1-207ENST00000563149 RNF224P0DH78 156 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 MYOD1P15172 320 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 ERHP84090 104 aaKnown RBP10.67□□□□□ -0.7
USB1-207ENST00000563149 NUP37Q8NFH4 326 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 OR4A5Q8NH83 315 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 ZNF503Q96F45 646 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 WFIKKN1Q96NZ8 548 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 TBX15Q96SF7 602 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 GAL3ST2Q9H3Q3 398 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 ZDBF2Q9HCK1 2354 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 KNTC1P50748 2209 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 DSCAML1Q8TD84 2053 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 IGKV1OR2-108A0A075B7D4 117 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 A0A1B0GUS0 222 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 A0A1W2PN81 502 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 GRIFINA4D1Z8 144 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 NKX6-3A6NJ46 265 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 SRRM4A7MD48 611 aaKnown RBP10.67□□□□□ -0.7
USB1-207ENST00000563149 M0R143 59 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 DLL1O00548 723 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 SNRPCP09234 159 aaKnown RBP10.67□□□□□ -0.7
USB1-207ENST00000563149 IER3P46695 156 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 PPOXP50336 477 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 NUTF2P61970 127 aaKnown RBP10.67□□□□□ -0.7
USB1-207ENST00000563149 OR10J3Q5JRS4 329 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 ALKBH2Q6NS38 261 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 DUX4L9Q6RFH8 374 aaPredicted RBP10.67□□□□□ -0.7
USB1-207ENST00000563149 TEX43Q6ZNM6 134 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 OR8I2Q8N0Y5 310 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 OR5AU1Q8NGC0 362 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 ZNF714Q96N38 554 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 SLC25A33Q9BSK2 321 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 FAM215AQ9Y5M1 114 aa10.67□□□□□ -0.7
USB1-207ENST00000563149 HEATR1Q9H583 2144 aaKnown RBP10.66□□□□□ -0.7
USB1-207ENST00000563149 OR7C2O60412 319 aa10.66□□□□□ -0.7
USB1-207ENST00000563149 SERF1AO75920 110 aa10.66□□□□□ -0.7
USB1-207ENST00000563149 SAA1P0DJI8 122 aaPredicted RBP10.66□□□□□ -0.7
USB1-207ENST00000563149 CEACAM8P31997 349 aaPredicted RBP10.66□□□□□ -0.7
USB1-207ENST00000563149 LINC00310P59036 64 aa10.66□□□□□ -0.7
USB1-207ENST00000563149 TMEM177Q53S58 311 aa10.66□□□□□ -0.7
USB1-207ENST00000563149 FAM71F2Q6NXP2 309 aa10.66□□□□□ -0.7
USB1-207ENST00000563149 BAGE3Q86Y29 109 aa10.66□□□□□ -0.7
USB1-207ENST00000563149 BAGE2Q86Y30 109 aa10.66□□□□□ -0.7
USB1-207ENST00000563149 DEFB124Q8NES8 71 aa10.66□□□□□ -0.7
USB1-207ENST00000563149 DEFB108BQ8NET1 73 aa10.66□□□□□ -0.7
USB1-207ENST00000563149 C20orf144Q9BQM9 153 aa10.66□□□□□ -0.7
USB1-207ENST00000563149 NDUFA4L2Q9NRX3 87 aa10.66□□□□□ -0.7
USB1-207ENST00000563149 M0QZK8 103 aa10.65□□□□□ -0.7
USB1-207ENST00000563149 MMP23AO75900 390 aa10.65□□□□□ -0.7
USB1-207ENST00000563149 IGKV1-16P04430 117 aa10.65□□□□□ -0.7
USB1-207ENST00000563149 TNFRSF1AP19438 455 aa10.65□□□□□ -0.7
USB1-207ENST00000563149 USF1P22415 310 aaPredicted RBP10.65□□□□□ -0.7
USB1-207ENST00000563149 OR5I1Q13606 314 aa10.65□□□□□ -0.7
USB1-207ENST00000563149 Q6ZWC4 215 aa10.65□□□□□ -0.7
USB1-207ENST00000563149 FAM216BQ8N7L0 139 aa10.65□□□□□ -0.7
USB1-207ENST00000563149 OR1L4Q8NGR5 311 aa10.65□□□□□ -0.7
USB1-207ENST00000563149 VSTM2AQ8TAG5 236 aa10.65□□□□□ -0.7
USB1-207ENST00000563149 COMMD5Q9GZQ3 224 aa10.65□□□□□ -0.7
USB1-207ENST00000563149 FAM186AA6NE01 2351 aa10.65□□□□□ -0.71
USB1-207ENST00000563149 SMIM27A0A1W2PRY6 76 aa10.65□□□□□ -0.71
USB1-207ENST00000563149 PSMB11A5LHX3 300 aa10.65□□□□□ -0.71
USB1-207ENST00000563149 HLA-DQA1P01909 254 aa10.65□□□□□ -0.71
USB1-207ENST00000563149 CD40P25942 277 aa10.65□□□□□ -0.71
USB1-207ENST00000563149 SUMO1P63165 101 aaKnown RBP10.65□□□□□ -0.71
USB1-207ENST00000563149 Q6ZS92 163 aa10.65□□□□□ -0.71
USB1-207ENST00000563149 OR5AN1Q8NGI8 311 aa10.65□□□□□ -0.71
USB1-207ENST00000563149 IGF2BP2-AS1Q96M15 143 aa10.65□□□□□ -0.71
USB1-207ENST00000563149 DNAJC4Q9NNZ3 241 aa10.65□□□□□ -0.71
USB1-207ENST00000563149 DSCAMO60469 2012 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 PCNX2A6NKB5 2137 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 GGTLC3B5MD39 225 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 H0YJW9 148 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 IGLV2-8P01709 118 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 CRYABP02511 175 aaKnown RBP10.64□□□□□ -0.71
USB1-207ENST00000563149 AMY1AP04745 511 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 RAB4AP20338 218 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 BRS3P32247 399 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 SUB1P53999 127 aaKnown RBP eCLIP10.64□□□□□ -0.71
USB1-207ENST00000563149 RPL8P62917 257 aaKnown RBP10.64□□□□□ -0.71
USB1-207ENST00000563149 IBA57Q5T440 356 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms