RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 C3orf85A0A1B0GTC6 90 aa13.49□□□□□ -0.25
CMTM3-204ENST00000562357 DISC1C4P0D8 188 aa13.49□□□□□ -0.25
CMTM3-204ENST00000562357 TGOLN2O43493 480 aa13.49□□□□□ -0.25
CMTM3-204ENST00000562357 ZNF57Q68EA5 555 aaPredicted RBP13.49□□□□□ -0.25
CMTM3-204ENST00000562357 SPSB3Q6PJ21 355 aa13.49□□□□□ -0.25
CMTM3-204ENST00000562357 ADAMTSL5Q6ZMM2 481 aa13.49□□□□□ -0.25
CMTM3-204ENST00000562357 OR1P1Q8NH06 330 aa13.49□□□□□ -0.25
CMTM3-204ENST00000562357 RNASE11Q8TAA1 199 aaKnown RBP13.49□□□□□ -0.25
CMTM3-204ENST00000562357 DYNC2LI1Q8TCX1 351 aa13.49□□□□□ -0.25
CMTM3-204ENST00000562357 BSCL2Q96G97 398 aaPredicted RBP13.49□□□□□ -0.25
CMTM3-204ENST00000562357 ATP6V0BQ99437 205 aa13.49□□□□□ -0.25
CMTM3-204ENST00000562357 PLEKHA3Q9HB20 300 aa13.49□□□□□ -0.25
CMTM3-204ENST00000562357 C19orf73Q9NVV2 129 aa13.49□□□□□ -0.25
CMTM3-204ENST00000562357 C14orf166Q9Y224 244 aaKnown RBP13.49□□□□□ -0.25
CMTM3-204ENST00000562357 TMEM213A2RRL7 107 aa13.48□□□□□ -0.25
CMTM3-204ENST00000562357 OR2T8A6NH00 312 aa13.48□□□□□ -0.25
CMTM3-204ENST00000562357 B3GALNT1O75752 331 aa13.48□□□□□ -0.25
CMTM3-204ENST00000562357 ELLP55199 621 aaPredicted RBP13.48□□□□□ -0.25
CMTM3-204ENST00000562357 HSPE1P61604 102 aaKnown RBP13.48□□□□□ -0.25
CMTM3-204ENST00000562357 ERHP84090 104 aaKnown RBP13.48□□□□□ -0.25
CMTM3-204ENST00000562357 PRCDQ00LT1 54 aa13.48□□□□□ -0.25
CMTM3-204ENST00000562357 Q56UQ5 140 aa13.48□□□□□ -0.25
CMTM3-204ENST00000562357 SLC16A13Q7RTY0 426 aa13.48□□□□□ -0.25
CMTM3-204ENST00000562357 UBAC2Q8NBM4 344 aa13.48□□□□□ -0.25
CMTM3-204ENST00000562357 UXS1Q8NBZ7 420 aa13.48□□□□□ -0.25
CMTM3-204ENST00000562357 OR4D10Q8NGI6 311 aa13.48□□□□□ -0.25
CMTM3-204ENST00000562357 OR13C8Q8NGS7 320 aa13.48□□□□□ -0.25
CMTM3-204ENST00000562357 CACNG8Q8WXS5 425 aa13.48□□□□□ -0.25
CMTM3-204ENST00000562357 RRNAD1Q96FB5 475 aaKnown RBP13.48□□□□□ -0.25
CMTM3-204ENST00000562357 NEURL2Q9BR09 285 aa13.48□□□□□ -0.25
CMTM3-204ENST00000562357 THAP7Q9BT49 309 aaPredicted RBP13.48□□□□□ -0.25
CMTM3-204ENST00000562357 IGHV3-35A0A0C4DH35 117 aa13.47□□□□□ -0.25
CMTM3-204ENST00000562357 DBX1A6NMT0 343 aa13.47□□□□□ -0.25
CMTM3-204ENST00000562357 CTDSPLO15194 276 aa13.47□□□□□ -0.25
CMTM3-204ENST00000562357 IGKV1-39P01597 117 aa13.47□□□□□ -0.25
CMTM3-204ENST00000562357 IGKV1D-39P04432 117 aa13.47□□□□□ -0.25
CMTM3-204ENST00000562357 CTSDP07339 412 aaPredicted RBP13.47□□□□□ -0.25
CMTM3-204ENST00000562357 ANKRD55Q3KP44 614 aa13.47□□□□□ -0.25
CMTM3-204ENST00000562357 MARCH1Q8TCQ1 289 aa13.47□□□□□ -0.25
CMTM3-204ENST00000562357 SCARB1Q8WTV0 552 aa13.47□□□□□ -0.25
CMTM3-204ENST00000562357 MISP3Q96FF7 219 aa13.47□□□□□ -0.25
CMTM3-204ENST00000562357 TP53RKQ96S44 253 aa13.47□□□□□ -0.25
CMTM3-204ENST00000562357 RSL24D1Q9UHA3 163 aaKnown RBP13.47□□□□□ -0.25
CMTM3-204ENST00000562357 IGHV3-21A0A0B4J1V1 117 aa13.46□□□□□ -0.25
CMTM3-204ENST00000562357 H3BMQ9 156 aa13.46□□□□□ -0.25
CMTM3-204ENST00000562357 AKAIN1P0CW23 69 aa13.46□□□□□ -0.25
CMTM3-204ENST00000562357 TM4SF20Q53R12 229 aa13.46□□□□□ -0.25
CMTM3-204ENST00000562357 BTNL8Q6UX41 500 aa13.46□□□□□ -0.25
CMTM3-204ENST00000562357 UNQ9165/PRO28630Q6UXU0 137 aa13.46□□□□□ -0.25
CMTM3-204ENST00000562357 RBPMS2Q6ZRY4 209 aaKnown RBP13.46□□□□□ -0.25
CMTM3-204ENST00000562357 OR2C3Q8N628 320 aa13.46□□□□□ -0.25
CMTM3-204ENST00000562357 SLC35G3Q8N808 338 aa13.46□□□□□ -0.25
CMTM3-204ENST00000562357 ISOC1Q96CN7 298 aa13.46□□□□□ -0.25
CMTM3-204ENST00000562357 WDR89Q96FK6 387 aaPredicted RBP13.46□□□□□ -0.25
CMTM3-204ENST00000562357 PRRT1Q99946 306 aa13.46□□□□□ -0.25
CMTM3-204ENST00000562357 SPATA25Q9BR10 227 aa13.46□□□□□ -0.25
CMTM3-204ENST00000562357 TM2D3Q9BRN9 247 aa13.46□□□□□ -0.25
CMTM3-204ENST00000562357 ZNF436Q9C0F3 470 aaPredicted RBP13.46□□□□□ -0.25
CMTM3-204ENST00000562357 MRPL27Q9P0M9 148 aaKnown RBP13.46□□□□□ -0.25
CMTM3-204ENST00000562357 TEX13DA0A0J9YY54 714 aaPredicted RBP13.45□□□□□ -0.26
CMTM3-204ENST00000562357 ZNF785A8K8V0 405 aa13.45□□□□□ -0.26
CMTM3-204ENST00000562357 NUPL2O15504 423 aaKnown RBP13.45□□□□□ -0.26
CMTM3-204ENST00000562357 IFNA17P01571 189 aa13.45□□□□□ -0.26
CMTM3-204ENST00000562357 EDN2P20800 178 aa13.45□□□□□ -0.26
CMTM3-204ENST00000562357 SNCAP37840 140 aa13.45□□□□□ -0.26
CMTM3-204ENST00000562357 MFAP2P55001 183 aa13.45□□□□□ -0.26
CMTM3-204ENST00000562357 SURF2Q15527 256 aaPredicted RBP13.45□□□□□ -0.26
CMTM3-204ENST00000562357 TMEM61Q8N0U2 210 aa13.45□□□□□ -0.26
CMTM3-204ENST00000562357 ZNF114Q8NC26 417 aa13.45□□□□□ -0.26
CMTM3-204ENST00000562357 MCFD2Q8NI22 146 aa13.45□□□□□ -0.26
CMTM3-204ENST00000562357 TMEM190Q8WZ59 177 aa13.45□□□□□ -0.26
CMTM3-204ENST00000562357 C20orf24Q9BUV8 137 aa13.45□□□□□ -0.26
CMTM3-204ENST00000562357 ENY2Q9NPA8 101 aa13.45□□□□□ -0.26
CMTM3-204ENST00000562357 DAZ1Q9NQZ3 744 aaKnown RBP13.45□□□□□ -0.26
CMTM3-204ENST00000562357 TENM3Q9P273 2699 aa13.44□□□□□ -0.26
CMTM3-204ENST00000562357 TRAV25A0A0B4J276 109 aa13.44□□□□□ -0.26
CMTM3-204ENST00000562357 CCDC160A6NGH7 325 aa13.44□□□□□ -0.26
CMTM3-204ENST00000562357 C3orf84H3BNL1 204 aa13.44□□□□□ -0.26
CMTM3-204ENST00000562357 K7EIM0 57 aa13.44□□□□□ -0.26
CMTM3-204ENST00000562357 NDUFA4O00483 81 aa13.44□□□□□ -0.26
CMTM3-204ENST00000562357 UCP1P25874 307 aa13.44□□□□□ -0.26
CMTM3-204ENST00000562357 MFAP4P55083 255 aa13.44□□□□□ -0.26
CMTM3-204ENST00000562357 RELQ04864 619 aaPredicted RBP13.44□□□□□ -0.26
CMTM3-204ENST00000562357 SP6Q3SY56 376 aa13.44□□□□□ -0.26
CMTM3-204ENST00000562357 FAAP20Q6NZ36 180 aa13.44□□□□□ -0.26
CMTM3-204ENST00000562357 OR52B4Q8NGK2 314 aa13.44□□□□□ -0.26
CMTM3-204ENST00000562357 OR4C16Q8NGL9 310 aa13.44□□□□□ -0.26
CMTM3-204ENST00000562357 MLXQ9UH92 298 aa13.44□□□□□ -0.26
CMTM3-204ENST00000562357 STAB2Q8WWQ8 2551 aa13.43□□□□□ -0.26
CMTM3-204ENST00000562357 FABP12A6NFH5 140 aa13.43□□□□□ -0.26
CMTM3-204ENST00000562357 OR11H12B2RN74 326 aa13.43□□□□□ -0.26
CMTM3-204ENST00000562357 SCAF4O95104 1147 aaKnown RBP13.43□□□□□ -0.26
CMTM3-204ENST00000562357 IGKV1-5P01602 117 aa13.43□□□□□ -0.26
CMTM3-204ENST00000562357 CD7P09564 240 aa13.43□□□□□ -0.26
CMTM3-204ENST00000562357 HOXA1P49639 335 aaPredicted RBP13.43□□□□□ -0.26
CMTM3-204ENST00000562357 SUB1P53999 127 aaKnown RBP eCLIP13.43□□□□□ -0.26
CMTM3-204ENST00000562357 HAGHQ16775 308 aa13.43□□□□□ -0.26
CMTM3-204ENST00000562357 IZUMO4Q1ZYL8 232 aa13.43□□□□□ -0.26
CMTM3-204ENST00000562357 PINX1Q96BK5 328 aaKnown RBP13.43□□□□□ -0.26
CMTM3-204ENST00000562357 SCGB3A2Q96PL1 93 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms