RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 NPCDR1Q9BY65 106 aa13.68□□□□□ -0.22
HDDC3-206ENST00000561036 KCNIP2Q9NS61 270 aa13.68□□□□□ -0.22
HDDC3-206ENST00000561036 C1RLQ9NZP8 487 aa13.68□□□□□ -0.22
HDDC3-206ENST00000561036 RFNGQ9Y644 331 aa13.68□□□□□ -0.22
HDDC3-206ENST00000561036 J3QLI3 93 aa13.67□□□□□ -0.22
HDDC3-206ENST00000561036 TSPAN15O95858 294 aa13.67□□□□□ -0.22
HDDC3-206ENST00000561036 HBE1P02100 147 aa13.67□□□□□ -0.22
HDDC3-206ENST00000561036 OR13C7P0DN81 318 aa13.67□□□□□ -0.22
HDDC3-206ENST00000561036 ZNF616Q08AN1 781 aa13.67□□□□□ -0.22
HDDC3-206ENST00000561036 RAB31Q13636 194 aa13.67□□□□□ -0.22
HDDC3-206ENST00000561036 HNF4GQ14541 408 aa13.67□□□□□ -0.22
HDDC3-206ENST00000561036 TREML4Q6UXN2 200 aa13.67□□□□□ -0.22
HDDC3-206ENST00000561036 PIP4P2Q8N4L2 257 aa13.67□□□□□ -0.22
HDDC3-206ENST00000561036 C7orf69Q9H7B7 122 aa13.67□□□□□ -0.22
HDDC3-206ENST00000561036 HIF1ANQ9NWT6 349 aa13.67□□□□□ -0.22
HDDC3-206ENST00000561036 LSM4Q9Y4Z0 139 aaKnown RBP13.67□□□□□ -0.22
HDDC3-206ENST00000561036 TRAV1-1A0A0B4J248 108 aa13.66□□□□□ -0.22
HDDC3-206ENST00000561036 SMCO3A2RU48 225 aa13.66□□□□□ -0.22
HDDC3-206ENST00000561036 KRBOX1C9JBD0 128 aa13.66□□□□□ -0.22
HDDC3-206ENST00000561036 I3L521 148 aa13.66□□□□□ -0.22
HDDC3-206ENST00000561036 H2AFB1P0C5Y9 115 aa13.66□□□□□ -0.22
HDDC3-206ENST00000561036 TMEM11P17152 192 aa13.66□□□□□ -0.22
HDDC3-206ENST00000561036 FHITP49789 147 aa13.66□□□□□ -0.22
HDDC3-206ENST00000561036 RAB2AP61019 212 aa13.66□□□□□ -0.22
HDDC3-206ENST00000561036 CD69Q07108 199 aa13.66□□□□□ -0.22
HDDC3-206ENST00000561036 ARSJQ5FYB0 599 aaPredicted RBP13.66□□□□□ -0.22
HDDC3-206ENST00000561036 SRSF12Q8WXF0 261 aaKnown RBP13.66□□□□□ -0.22
HDDC3-206ENST00000561036 P2RX4Q99571 388 aa13.66□□□□□ -0.22
HDDC3-206ENST00000561036 TNCP24821 2201 aa13.66□□□□□ -0.22
HDDC3-206ENST00000561036 TEX22C9J3V5 150 aa13.65□□□□□ -0.22
HDDC3-206ENST00000561036 FCN1O00602 326 aa13.65□□□□□ -0.22
HDDC3-206ENST00000561036 OPRK1P41145 380 aa13.65□□□□□ -0.22
HDDC3-206ENST00000561036 GNB1P62873 340 aa13.65□□□□□ -0.22
HDDC3-206ENST00000561036 SSBP2P81877 361 aaPredicted RBP13.65□□□□□ -0.22
HDDC3-206ENST00000561036 Q5PR19 223 aa13.65□□□□□ -0.22
HDDC3-206ENST00000561036 TEPPQ6URK8 271 aa13.65□□□□□ -0.22
HDDC3-206ENST00000561036 TMEM144Q7Z5S9 345 aa13.65□□□□□ -0.22
HDDC3-206ENST00000561036 MBD3L1Q8WWY6 194 aa13.65□□□□□ -0.22
HDDC3-206ENST00000561036 MEGF9Q9H1U4 602 aa13.65□□□□□ -0.22
HDDC3-206ENST00000561036 RPRMQ9NS64 109 aa13.65□□□□□ -0.22
HDDC3-206ENST00000561036 CORTO00230 105 aa13.64□□□□□ -0.23
HDDC3-206ENST00000561036 CNIH1O95406 144 aa13.64□□□□□ -0.23
HDDC3-206ENST00000561036 CD24P25063 80 aa13.64□□□□□ -0.23
HDDC3-206ENST00000561036 TOR2AQ5JU69 321 aa13.64□□□□□ -0.23
HDDC3-206ENST00000561036 ETFRF1Q6IPR1 90 aa13.64□□□□□ -0.23
HDDC3-206ENST00000561036 ZNF562Q6V9R5 426 aa13.64□□□□□ -0.23
HDDC3-206ENST00000561036 OR1P1Q8NH06 330 aa13.64□□□□□ -0.23
HDDC3-206ENST00000561036 CHD6Q8TD26 2715 aa13.64□□□□□ -0.23
HDDC3-206ENST00000561036 TRAV40A0A0B4J280 105 aa13.63□□□□□ -0.23
HDDC3-206ENST00000561036 ZP3P21754 424 aa13.63□□□□□ -0.23
HDDC3-206ENST00000561036 PAX6P26367 422 aa13.63□□□□□ -0.23
HDDC3-206ENST00000561036 BPIFB3P59826 476 aa13.63□□□□□ -0.23
HDDC3-206ENST00000561036 AKR1C1Q04828 323 aa13.63□□□□□ -0.23
HDDC3-206ENST00000561036 FXYD3Q14802 87 aa13.63□□□□□ -0.23
HDDC3-206ENST00000561036 ACOT6Q3I5F7 207 aaPredicted RBP13.63□□□□□ -0.23
HDDC3-206ENST00000561036 FFAR4Q5NUL3 377 aa13.63□□□□□ -0.23
HDDC3-206ENST00000561036 ACSM6Q6P461 480 aa13.63□□□□□ -0.23
HDDC3-206ENST00000561036 OR1L6Q8NGR2 347 aa13.63□□□□□ -0.23
HDDC3-206ENST00000561036 SLC35E1Q96K37 410 aa13.63□□□□□ -0.23
HDDC3-206ENST00000561036 MGST2Q99735 147 aa13.63□□□□□ -0.23
HDDC3-206ENST00000561036 NCBP2LA6PVI3 153 aaKnown RBP13.62□□□□□ -0.23
HDDC3-206ENST00000561036 M6PRP20645 277 aa13.62□□□□□ -0.23
HDDC3-206ENST00000561036 RPL29P47914 159 aaKnown RBP13.62□□□□□ -0.23
HDDC3-206ENST00000561036 GAMTQ14353 236 aa13.62□□□□□ -0.23
HDDC3-206ENST00000561036 FAM120AOSQ5T036 256 aa13.62□□□□□ -0.23
HDDC3-206ENST00000561036 SPSB3Q6PJ21 355 aa13.62□□□□□ -0.23
HDDC3-206ENST00000561036 SLC16A13Q7RTY0 426 aa13.62□□□□□ -0.23
HDDC3-206ENST00000561036 PBDC1Q9BVG4 233 aa13.62□□□□□ -0.23
HDDC3-206ENST00000561036 GGTLC1Q9BX51 225 aa13.62□□□□□ -0.23
HDDC3-206ENST00000561036 F11RQ9Y624 299 aaKnown RBP13.62□□□□□ -0.23
HDDC3-206ENST00000561036 ABCA2Q9BZC7 2435 aa13.62□□□□□ -0.23
HDDC3-206ENST00000561036 SPG11Q96JI7 2443 aa13.61□□□□□ -0.23
HDDC3-206ENST00000561036 USP9YO00507 2555 aaPredicted RBP13.61□□□□□ -0.23
HDDC3-206ENST00000561036 RNF223E7ERA6 249 aa13.61□□□□□ -0.23
HDDC3-206ENST00000561036 CYB5BO43169 146 aa13.61□□□□□ -0.23
HDDC3-206ENST00000561036 HLA-DRB1P01911 266 aa13.61□□□□□ -0.23
HDDC3-206ENST00000561036 AREGP15514 252 aa13.61□□□□□ -0.23
HDDC3-206ENST00000561036 ELLP55199 621 aaPredicted RBP13.61□□□□□ -0.23
HDDC3-206ENST00000561036 FBLN7Q53RD9 439 aa13.61□□□□□ -0.23
HDDC3-206ENST00000561036 Q8N9W7 124 aa13.61□□□□□ -0.23
HDDC3-206ENST00000561036 SFT2D1Q8WV19 159 aa13.61□□□□□ -0.23
HDDC3-206ENST00000561036 SSMEM1Q8WWF3 244 aa13.61□□□□□ -0.23
HDDC3-206ENST00000561036 RCC1LQ96I51 464 aaKnown RBP13.61□□□□□ -0.23
HDDC3-206ENST00000561036 ACTR3CQ9C0K3 210 aaPredicted RBP13.61□□□□□ -0.23
HDDC3-206ENST00000561036 SMDT1Q9H4I9 107 aa13.61□□□□□ -0.23
HDDC3-206ENST00000561036 VSIRQ9H7M9 311 aa13.61□□□□□ -0.23
HDDC3-206ENST00000561036 WNK2Q9Y3S1 2297 aa13.61□□□□□ -0.23
HDDC3-206ENST00000561036 CTXND1A0A1B0GTU2 59 aa13.6□□□□□ -0.23
HDDC3-206ENST00000561036 AGPAT2O15120 278 aa13.6□□□□□ -0.23
HDDC3-206ENST00000561036 REG1AP05451 166 aa13.6□□□□□ -0.23
HDDC3-206ENST00000561036 CD5P06127 495 aa13.6□□□□□ -0.23
HDDC3-206ENST00000561036 CRYGCP07315 174 aa13.6□□□□□ -0.23
HDDC3-206ENST00000561036 IGHV4-38-2P0DP08 117 aa13.6□□□□□ -0.23
HDDC3-206ENST00000561036 PEA15Q15121 130 aa13.6□□□□□ -0.23
HDDC3-206ENST00000561036 RUSC1-AS1Q66K80 236 aa13.6□□□□□ -0.23
HDDC3-206ENST00000561036 BPIFCQ8NFQ6 507 aa13.6□□□□□ -0.23
HDDC3-206ENST00000561036 OR10G4Q8NGN3 311 aa13.6□□□□□ -0.23
HDDC3-206ENST00000561036 OR10G9Q8NGN4 311 aa13.6□□□□□ -0.23
HDDC3-206ENST00000561036 OR10G7Q8NGN6 311 aa13.6□□□□□ -0.23
HDDC3-206ENST00000561036 ABHD5Q8WTS1 349 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms