RNA–Protein interactions for RNA: ENST00000560962.5

USP3-AS1-208, USP3 antisense RNA 1, humanhuman

TSL 2

Gene USP3-AS1, Length 1,807 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-208ENST00000560962 GGACTQ9BVM4 153 aa14.24□□□□□ -0.13
USP3-AS1-208ENST00000560962 C7orf69Q9H7B7 122 aa14.24□□□□□ -0.13
USP3-AS1-208ENST00000560962 MAP1AP78559 2803 aaPredicted RBP14.23□□□□□ -0.13
USP3-AS1-208ENST00000560962 IGHV1-69DA0A0B4J2H0 117 aa14.23□□□□□ -0.13
USP3-AS1-208ENST00000560962 NBR2O15453 112 aa14.23□□□□□ -0.13
USP3-AS1-208ENST00000560962 TSPAN15O95858 294 aa14.23□□□□□ -0.13
USP3-AS1-208ENST00000560962 IGHV1-69P01742 117 aa14.23□□□□□ -0.13
USP3-AS1-208ENST00000560962 REG1AP05451 166 aa14.23□□□□□ -0.13
USP3-AS1-208ENST00000560962 MDKP21741 143 aaPredicted RBP14.23□□□□□ -0.13
USP3-AS1-208ENST00000560962 BSXQ3C1V8 233 aa14.23□□□□□ -0.13
USP3-AS1-208ENST00000560962 OR2T10Q8NGZ9 312 aa14.23□□□□□ -0.13
USP3-AS1-208ENST00000560962 RAB19A4D1S5 217 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 INS-IGF2F8WCM5 200 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 APELAP0DMC3 54 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 MAS1LP35410 378 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 COMPP49747 757 aaPredicted RBP14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 SRSF3P84103 164 aaKnown RBP14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 AKR1C1Q04828 323 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 EBI3Q14213 229 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 ARSJQ5FYB0 599 aaPredicted RBP14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 RUSC1-AS1Q66K80 236 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 IL34Q6ZMJ4 242 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 LYPD6BQ8NI32 183 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 Q96MF0 132 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 NPCDR1Q9BY65 106 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 RPRMQ9NS64 109 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 KIAA1456Q9P272 454 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 WDR83OSQ9Y284 106 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 TIMM9Q9Y5J7 89 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 NUDT19A8MXV4 375 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 SERF2P84101 59 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 FAM120AOSQ5T036 256 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 TREML4Q6UXN2 200 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 CENPVQ7Z7K6 275 aaPredicted RBP14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 ZNF709Q8N972 641 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 NPBQ8NG41 125 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 LINC00052Q96N35 136 aa14.22□□□□□ -0.13
USP3-AS1-208ENST00000560962 GCN1Q92616 2671 aaKnown RBP14.21□□□□□ -0.13
USP3-AS1-208ENST00000560962 NAV3Q8IVL0 2385 aa14.21□□□□□ -0.13
USP3-AS1-208ENST00000560962 TRAV40A0A0B4J280 105 aa14.21□□□□□ -0.13
USP3-AS1-208ENST00000560962 MLANAQ16655 118 aa14.21□□□□□ -0.13
USP3-AS1-208ENST00000560962 ACSM6Q6P461 480 aa14.21□□□□□ -0.13
USP3-AS1-208ENST00000560962 BPIFCQ8NFQ6 507 aa14.21□□□□□ -0.13
USP3-AS1-208ENST00000560962 TMEM231Q9H6L2 316 aa14.21□□□□□ -0.13
USP3-AS1-208ENST00000560962 IGLC7A0M8Q6 106 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 NDUFA3O95167 84 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 H2AFB1P0C5Y9 115 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 ATP5IP56385 69 aaPredicted RBP14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 SSBP2P81877 361 aaPredicted RBP14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 Q8N6K4 173 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 MAPK1IP1LQ8NDC0 245 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 FAM210AQ96ND0 272 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 P2RX4Q99571 388 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 NPVFQ9HCQ7 196 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 NCBP2LA6PVI3 153 aaKnown RBP14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 J3QLI3 93 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 CNIH1O95406 144 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 AREGP15514 252 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 TMEM11P17152 192 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 BRS3P32247 399 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 RAB2AP61019 212 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 TMEM249Q2WGJ8 235 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 TMEM41BQ5BJD5 291 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 FFAR4Q5NUL3 377 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 DPPA3Q6W0C5 159 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 BRD3OSQ6XYD6 125 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 SRSF12Q8WXF0 261 aaKnown RBP14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 NARS2Q96I59 477 aaKnown RBP14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 FAM96BQ9Y3D0 163 aa14.2□□□□□ -0.14
USP3-AS1-208ENST00000560962 C17orf112F2Z3M2 114 aa14.19□□□□□ -0.14
USP3-AS1-208ENST00000560962 IGHV4-31P0DP07 118 aa14.19□□□□□ -0.14
USP3-AS1-208ENST00000560962 IGHV4-38-2P0DP08 117 aa14.19□□□□□ -0.14
USP3-AS1-208ENST00000560962 C19orf35Q6ZS72 473 aa14.19□□□□□ -0.14
USP3-AS1-208ENST00000560962 SFT2D1Q8WV19 159 aa14.19□□□□□ -0.14
USP3-AS1-208ENST00000560962 MGST2Q99735 147 aa14.19□□□□□ -0.14
USP3-AS1-208ENST00000560962 TEX22C9J3V5 150 aa14.18□□□□□ -0.14
USP3-AS1-208ENST00000560962 EIF3GO75821 320 aaKnown RBP eCLIP14.18□□□□□ -0.14
USP3-AS1-208ENST00000560962 TGFAP01135 160 aa14.18□□□□□ -0.14
USP3-AS1-208ENST00000560962 AVPP01185 164 aa14.18□□□□□ -0.14
USP3-AS1-208ENST00000560962 FAM106CPP0CH98 169 aa14.18□□□□□ -0.14
USP3-AS1-208ENST00000560962 SUB1P53999 127 aaKnown RBP eCLIP14.18□□□□□ -0.14
USP3-AS1-208ENST00000560962 CCL20P78556 96 aa14.18□□□□□ -0.14
USP3-AS1-208ENST00000560962 C5orf64Q2M2E5 130 aa14.18□□□□□ -0.14
USP3-AS1-208ENST00000560962 SPSB3Q6PJ21 355 aa14.18□□□□□ -0.14
USP3-AS1-208ENST00000560962 UQCC3Q6UW78 93 aa14.18□□□□□ -0.14
USP3-AS1-208ENST00000560962 TREM1Q9NP99 234 aa14.18□□□□□ -0.14
USP3-AS1-208ENST00000560962 MPDU1O75352 247 aa14.18□□□□□ -0.14
USP3-AS1-208ENST00000560962 CD69Q07108 199 aa14.18□□□□□ -0.14
USP3-AS1-208ENST00000560962 ZNF726P1Q15940 193 aa14.18□□□□□ -0.14
USP3-AS1-208ENST00000560962 SSX7Q7RTT5 188 aa14.18□□□□□ -0.14
USP3-AS1-208ENST00000560962 MRPL41Q8IXM3 137 aaKnown RBP14.18□□□□□ -0.14
USP3-AS1-208ENST00000560962 SSMEM1Q8WWF3 244 aa14.18□□□□□ -0.14
USP3-AS1-208ENST00000560962 LSM4Q9Y4Z0 139 aaKnown RBP14.18□□□□□ -0.14
USP3-AS1-208ENST00000560962 ZP3P21754 424 aa14.17□□□□□ -0.14
USP3-AS1-208ENST00000560962 KLF17Q5JT82 389 aaPredicted RBP14.17□□□□□ -0.14
USP3-AS1-208ENST00000560962 TEPPQ6URK8 271 aa14.17□□□□□ -0.14
USP3-AS1-208ENST00000560962 ABHD5Q8WTS1 349 aa14.17□□□□□ -0.14
USP3-AS1-208ENST00000560962 RCC1LQ96I51 464 aaKnown RBP14.17□□□□□ -0.14
USP3-AS1-208ENST00000560962 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.16□□□□□ -0.14
USP3-AS1-208ENST00000560962 KRBOX1C9JBD0 128 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms