RNA–Protein interactions for RNA: ENST00000560673.1

KNSTRN-211, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-211ENST00000560673 SCGB1D2O95969 90 aa8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 MBPP02686 304 aaPredicted RBP8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 GAPDHP04406 335 aaKnown RBP8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 RCC1P18754 421 aaPredicted RBP8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 PVALBP20472 110 aaPredicted RBP8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 P2RY1P47900 373 aa8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 EWSR1Q01844 656 aaKnown RBP eCLIP8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 GNMTQ14749 295 aa8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 HMGN3Q15651 99 aa8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 PRAMEF5Q5TYX0 476 aa8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 TRAT1Q6PIZ9 186 aa8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 ZNF818PQ6ZRF7 136 aa8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 Q8N1X5 172 aa8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 SLC35G3Q8N808 338 aa8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 PLPPR1Q8TBJ4 325 aa8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 RNF141Q8WVD5 230 aa8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 RNF183Q96D59 192 aa8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 CXorf58Q96LI9 332 aa8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 CCL28Q9NRJ3 127 aa8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 CYTL1Q9NRR1 136 aa8.63□□□□□ -1.03
KNSTRN-211ENST00000560673 IGHV4OR15-8A0A075B7B6 117 aa8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 A0A087WW49 117 aa8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 BORCS7-ASMTA0A0B4J1R7 106 aa8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 IGKV1D-13A0A0B4J2D9 117 aa8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 MSGN1A6NI15 193 aa8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 ZNF737O75373 536 aa8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 PGLYRP1O75594 196 aaPredicted RBP8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 FGF2P09038 288 aa8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 IGKV1-13P0DP09 117 aa8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 SLC25A6P12236 298 aa8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 ZP3P21754 424 aa8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 F2RP25116 425 aa8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 HEPN1Q6WQI6 88 aa8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 SELENOHQ8IZQ5 122 aaKnown RBP8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 TPRX1Q8N7U7 411 aa8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 ZBTB34Q8NCN2 500 aa8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 OR4D5Q8NGN0 318 aa8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 PHLDA1Q8WV24 401 aaPredicted RBP8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 IL1F10Q8WWZ1 152 aa8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 WSB1Q9Y6I7 421 aa8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 APOBP04114 4563 aaKnown RBP8.62□□□□□ -1.03
KNSTRN-211ENST00000560673 TEX46H3BTG2 121 aa8.61□□□□□ -1.03
KNSTRN-211ENST00000560673 NDUFB8O95169 186 aa8.61□□□□□ -1.03
KNSTRN-211ENST00000560673 SERPINE2P07093 398 aa8.61□□□□□ -1.03
KNSTRN-211ENST00000560673 RAB9AP51151 201 aa8.61□□□□□ -1.03
KNSTRN-211ENST00000560673 PAX5Q02548 391 aa8.61□□□□□ -1.03
KNSTRN-211ENST00000560673 TNFRSF9Q07011 255 aa8.61□□□□□ -1.03
KNSTRN-211ENST00000560673 MSMO1Q15800 293 aa8.61□□□□□ -1.03
KNSTRN-211ENST00000560673 FAM74A1Q5RGS3 127 aa8.61□□□□□ -1.03
KNSTRN-211ENST00000560673 UQCC3Q6UW78 93 aa8.61□□□□□ -1.03
KNSTRN-211ENST00000560673 LHFPL5Q8TAF8 219 aa8.61□□□□□ -1.03
KNSTRN-211ENST00000560673 GALMQ96C23 342 aa8.61□□□□□ -1.03
KNSTRN-211ENST00000560673 SAT2Q96F10 170 aaPredicted RBP8.61□□□□□ -1.03
KNSTRN-211ENST00000560673 OVOL2Q9BRP0 275 aa8.61□□□□□ -1.03
KNSTRN-211ENST00000560673 TOLLIPQ9H0E2 274 aa8.61□□□□□ -1.03
KNSTRN-211ENST00000560673 GAL3ST2Q9H3Q3 398 aa8.61□□□□□ -1.03
KNSTRN-211ENST00000560673 TAF9BQ9HBM6 251 aa8.61□□□□□ -1.03
KNSTRN-211ENST00000560673 AMMECR1Q9Y4X0 333 aaPredicted RBP8.61□□□□□ -1.03
KNSTRN-211ENST00000560673 RBM7Q9Y580 266 aaKnown RBP8.61□□□□□ -1.03
KNSTRN-211ENST00000560673 A0A1B0GU03 582 aa8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 A0A1W2PPI3 338 aa8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 RAB19A4D1S5 217 aa8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 CEACAM6P40199 344 aa8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 NKX2-1P43699 371 aaPredicted RBP8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 VAMP2P63027 116 aa8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 LCN12Q6JVE5 192 aa8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 Q8N9W7 124 aa8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 ARL11Q969Q4 196 aa8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 MARC2Q969Z3 335 aa8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 FLYWCH2Q96CP2 140 aaKnown RBP8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 SNX22Q96L94 193 aa8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 RASL11BQ9BPW5 248 aa8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 HSPB9Q9BQS6 159 aa8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 SLC25A31Q9H0C2 315 aa8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 SCRT2Q9NQ03 307 aa8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 OR2S2Q9NQN1 319 aa8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 TAS2R3Q9NYW6 316 aa8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 OR1A1Q9P1Q5 309 aa8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 FBXL17Q9UF56 701 aa8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 ZNF580Q9UK33 172 aa8.6□□□□□ -1.03
KNSTRN-211ENST00000560673 IGLV1-40P01703 118 aa8.59□□□□□ -1.03
KNSTRN-211ENST00000560673 LGALS1P09382 135 aaKnown RBP8.59□□□□□ -1.03
KNSTRN-211ENST00000560673 ATF4P18848 351 aaPredicted RBP8.59□□□□□ -1.03
KNSTRN-211ENST00000560673 PPIFP30405 207 aaKnown RBP8.59□□□□□ -1.03
KNSTRN-211ENST00000560673 RAB7AP51149 207 aa8.59□□□□□ -1.03
KNSTRN-211ENST00000560673 CD81P60033 236 aa8.59□□□□□ -1.03
KNSTRN-211ENST00000560673 BLOC1S1P78537 153 aa8.59□□□□□ -1.03
KNSTRN-211ENST00000560673 NMSQ5H8A3 153 aa8.59□□□□□ -1.03
KNSTRN-211ENST00000560673 RPL7L1Q6DKI1 246 aaKnown RBP8.59□□□□□ -1.03
KNSTRN-211ENST00000560673 TCTEX1D1Q8N7M0 179 aa8.59□□□□□ -1.03
KNSTRN-211ENST00000560673 UBAC2Q8NBM4 344 aa8.59□□□□□ -1.03
KNSTRN-211ENST00000560673 OR52M1Q8NGK5 317 aa8.59□□□□□ -1.03
KNSTRN-211ENST00000560673 TMED6Q8WW62 240 aa8.59□□□□□ -1.03
KNSTRN-211ENST00000560673 LSM10Q969L4 123 aaKnown RBP8.59□□□□□ -1.03
KNSTRN-211ENST00000560673 RAB9BQ9NP90 201 aa8.59□□□□□ -1.03
KNSTRN-211ENST00000560673 TPSG1Q9NRR2 321 aa8.59□□□□□ -1.03
KNSTRN-211ENST00000560673 RCL1Q9Y2P8 373 aaKnown RBP8.59□□□□□ -1.03
KNSTRN-211ENST00000560673 LRP1BQ9NZR2 4599 aa8.59□□□□□ -1.03
KNSTRN-211ENST00000560673 TRGV10A0A0A0MS01 117 aa8.58□□□□□ -1.04
KNSTRN-211ENST00000560673 WRBO00258 174 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms