RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 LPAR6P43657 344 aa10.94□□□□□ -0.66
PKNOX1-209ENST00000560448 GNB1P62873 340 aa10.94□□□□□ -0.66
PKNOX1-209ENST00000560448 SSBP2P81877 361 aaPredicted RBP10.94□□□□□ -0.66
PKNOX1-209ENST00000560448 PJVKQ0ZLH3 352 aa10.94□□□□□ -0.66
PKNOX1-209ENST00000560448 EXOSC2Q13868 293 aaKnown RBP10.94□□□□□ -0.66
PKNOX1-209ENST00000560448 MRGPRG-AS1Q2M3A8 158 aa10.94□□□□□ -0.66
PKNOX1-209ENST00000560448 ZNF585BQ52M93 769 aa10.94□□□□□ -0.66
PKNOX1-209ENST00000560448 KHDC1LQ5JSQ8 128 aa10.94□□□□□ -0.66
PKNOX1-209ENST00000560448 HSD17B13Q7Z5P4 300 aaPredicted RBP10.94□□□□□ -0.66
PKNOX1-209ENST00000560448 OR1S1Q8NH92 325 aa10.94□□□□□ -0.66
PKNOX1-209ENST00000560448 TMEM140Q9NV12 185 aa10.94□□□□□ -0.66
PKNOX1-209ENST00000560448 FBXO7Q9Y3I1 522 aa10.94□□□□□ -0.66
PKNOX1-209ENST00000560448 WSB1Q9Y6I7 421 aa10.94□□□□□ -0.66
PKNOX1-209ENST00000560448 ADARB2-AS1A8MUL3 147 aa10.93□□□□□ -0.66
PKNOX1-209ENST00000560448 IFNA7P01567 189 aa10.93□□□□□ -0.66
PKNOX1-209ENST00000560448 PF4V1P10720 104 aa10.93□□□□□ -0.66
PKNOX1-209ENST00000560448 RAB9AP51151 201 aa10.93□□□□□ -0.66
PKNOX1-209ENST00000560448 AP2S1P53680 142 aaPredicted RBP10.93□□□□□ -0.66
PKNOX1-209ENST00000560448 NMSQ5H8A3 153 aa10.93□□□□□ -0.66
PKNOX1-209ENST00000560448 C10orf99Q6UWK7 81 aa10.93□□□□□ -0.66
PKNOX1-209ENST00000560448 TREML4Q6UXN2 200 aa10.93□□□□□ -0.66
PKNOX1-209ENST00000560448 SLC51BQ86UW2 128 aa10.93□□□□□ -0.66
PKNOX1-209ENST00000560448 ZNF695Q8IW36 515 aa10.93□□□□□ -0.66
PKNOX1-209ENST00000560448 VKORC1L1Q8N0U8 176 aa10.93□□□□□ -0.66
PKNOX1-209ENST00000560448 OR4D5Q8NGN0 318 aa10.93□□□□□ -0.66
PKNOX1-209ENST00000560448 OR5B3Q8NH48 314 aa10.93□□□□□ -0.66
PKNOX1-209ENST00000560448 DCUN1D4Q92564 292 aa10.93□□□□□ -0.66
PKNOX1-209ENST00000560448 COMMD5Q9GZQ3 224 aa10.93□□□□□ -0.66
PKNOX1-209ENST00000560448 PRNDQ9UKY0 176 aa10.93□□□□□ -0.66
PKNOX1-209ENST00000560448 A0A0G2JLM5 398 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 UPK2O00526 184 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 BCL2L11O43521 198 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 DEDDO75618 318 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 MBPP02686 304 aaPredicted RBP10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 PET100P0DJ07 73 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 HTR2BP41595 481 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 RPL27AP46776 148 aaKnown RBP10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 FAM209BQ5JX69 171 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 SSX9Q7RTT3 188 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 FAM219AQ8IW50 185 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 MRPL41Q8IXM3 137 aaKnown RBP10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 INO80EQ8NBZ0 244 aaPredicted RBP10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 FAM110DQ8TAY7 271 aaPredicted RBP10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 C4orf3Q8WVX3 66 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 RBPMSQ93062 196 aaKnown RBP10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 AQP10Q96PS8 301 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 FAM103A1Q9BTL3 118 aaKnown RBP10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 CACFD1Q9UGQ2 172 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 PLXNB1O43157 2135 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 FBN3Q75N90 2809 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 RPS10-NUDT3A0A1W2PQS6 291 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 MSGN1A6NI15 193 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 K7EPK0 472 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 KRASP01116 189 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 IGKV1-39P01597 117 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 IGKV1D-39P04432 117 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 RUNX1Q01196 453 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 NSUN5P1Q3KNT7 163 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 H2BFWTQ7Z2G1 175 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 TTC9CQ8N5M4 171 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 C11orf1Q9H5F2 150 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 UBQLN2Q9UHD9 624 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 ZNF257Q9Y2Q1 563 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 TNCP24821 2201 aa10.92□□□□□ -0.66
PKNOX1-209ENST00000560448 NPIPB5A8MRT5 1133 aa10.91□□□□□ -0.66
PKNOX1-209ENST00000560448 NUDT19A8MXV4 375 aa10.91□□□□□ -0.66
PKNOX1-209ENST00000560448 RPLP1P05386 114 aaKnown RBP10.91□□□□□ -0.66
PKNOX1-209ENST00000560448 OR9G9P0C7N8 305 aa10.91□□□□□ -0.66
PKNOX1-209ENST00000560448 G6PCP35575 357 aa10.91□□□□□ -0.66
PKNOX1-209ENST00000560448 MYCNOSP40205 109 aa10.91□□□□□ -0.66
PKNOX1-209ENST00000560448 S100A10P60903 97 aa10.91□□□□□ -0.66
PKNOX1-209ENST00000560448 ZNF491Q8N8L2 437 aa10.91□□□□□ -0.66
PKNOX1-209ENST00000560448 KLHL30-AS1Q8NEE0 82 aa10.91□□□□□ -0.66
PKNOX1-209ENST00000560448 OR1L8Q8NGR8 309 aa10.91□□□□□ -0.66
PKNOX1-209ENST00000560448 USMG5Q96IX5 58 aa10.91□□□□□ -0.66
PKNOX1-209ENST00000560448 QTRT1Q9BXR0 403 aaKnown RBP10.91□□□□□ -0.66
PKNOX1-209ENST00000560448 KANTRA0A1W2PQU2 76 aa10.9□□□□□ -0.66
PKNOX1-209ENST00000560448 C15orf61A6NNL5 157 aa10.9□□□□□ -0.66
PKNOX1-209ENST00000560448 CYB5BO43169 146 aa10.9□□□□□ -0.66
PKNOX1-209ENST00000560448 SOX15O60248 233 aa10.9□□□□□ -0.66
PKNOX1-209ENST00000560448 TSPAN15O95858 294 aa10.9□□□□□ -0.66
PKNOX1-209ENST00000560448 PF4P02776 101 aa10.9□□□□□ -0.66
PKNOX1-209ENST00000560448 SLC25A6P12236 298 aa10.9□□□□□ -0.66
PKNOX1-209ENST00000560448 AKR1C2P52895 323 aa10.9□□□□□ -0.66
PKNOX1-209ENST00000560448 CLLU1Q5K131 121 aa10.9□□□□□ -0.66
PKNOX1-209ENST00000560448 ZNF429Q86V71 674 aa10.9□□□□□ -0.66
PKNOX1-209ENST00000560448 ST8SIA2Q92186 375 aa10.9□□□□□ -0.66
PKNOX1-209ENST00000560448 LSM10Q969L4 123 aaKnown RBP10.9□□□□□ -0.66
PKNOX1-209ENST00000560448 ARPC5LQ9BPX5 153 aa10.9□□□□□ -0.66
PKNOX1-209ENST00000560448 CYTL1Q9NRR1 136 aa10.9□□□□□ -0.66
PKNOX1-209ENST00000560448 LSM5Q9Y4Y9 91 aaKnown RBP10.9□□□□□ -0.66
PKNOX1-209ENST00000560448 A0A0G2JRQ6 117 aa10.89□□□□□ -0.67
PKNOX1-209ENST00000560448 FAM223BA6NKX1 122 aa10.89□□□□□ -0.67
PKNOX1-209ENST00000560448 ST8SIA3O43173 380 aa10.89□□□□□ -0.67
PKNOX1-209ENST00000560448 PITX3O75364 302 aa10.89□□□□□ -0.67
PKNOX1-209ENST00000560448 RLN2P04090 185 aa10.89□□□□□ -0.67
PKNOX1-209ENST00000560448 CRYGCP07315 174 aa10.89□□□□□ -0.67
PKNOX1-209ENST00000560448 OR2B8PP59922 312 aa10.89□□□□□ -0.67
PKNOX1-209ENST00000560448 KLK9Q2XQG4 91 aa10.89□□□□□ -0.67
PKNOX1-209ENST00000560448 ASPHD1Q5U4P2 390 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms