RNA–Protein interactions for RNA: ENST00000560409.5

SEC11A-210, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 3

Gene SEC11A, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-210ENST00000560409 HOXD3P31249 432 aaPredicted RBP5.54□□□□□ -1.52
SEC11A-210ENST00000560409 MC5RP33032 325 aa5.54□□□□□ -1.52
SEC11A-210ENST00000560409 NKX2-5P52952 324 aaPredicted RBP5.54□□□□□ -1.52
SEC11A-210ENST00000560409 ERVK-16P61578 105 aa5.54□□□□□ -1.52
SEC11A-210ENST00000560409 CYCSP99999 105 aaKnown RBP5.54□□□□□ -1.52
SEC11A-210ENST00000560409 KRTAP1-1Q07627 177 aa5.54□□□□□ -1.52
SEC11A-210ENST00000560409 SMCO1Q147U7 214 aa5.54□□□□□ -1.52
SEC11A-210ENST00000560409 SSX2Q16385 188 aa5.54□□□□□ -1.52
SEC11A-210ENST00000560409 LRRC37A5PQ49AS3 106 aa5.54□□□□□ -1.52
SEC11A-210ENST00000560409 AARDQ4LEZ3 155 aa5.54□□□□□ -1.52
SEC11A-210ENST00000560409 THOC7Q6I9Y2 204 aaKnown RBP5.54□□□□□ -1.52
SEC11A-210ENST00000560409 OR4A47Q6IF82 309 aa5.54□□□□□ -1.52
SEC11A-210ENST00000560409 BRD3OSQ6XYD6 125 aa5.54□□□□□ -1.52
SEC11A-210ENST00000560409 MOB3BQ86TA1 216 aa5.54□□□□□ -1.52
SEC11A-210ENST00000560409 OR8H3Q8N146 312 aa5.54□□□□□ -1.52
SEC11A-210ENST00000560409 PRR26Q8N8Z3 221 aa5.54□□□□□ -1.52
SEC11A-210ENST00000560409 PPP1R1CQ8WVI7 109 aa5.54□□□□□ -1.52
SEC11A-210ENST00000560409 RRNAD1Q96FB5 475 aaKnown RBP5.54□□□□□ -1.52
SEC11A-210ENST00000560409 HARBI1Q96MB7 349 aa5.54□□□□□ -1.52
SEC11A-210ENST00000560409 SMR3AQ99954 134 aa5.54□□□□□ -1.52
SEC11A-210ENST00000560409 COA4Q9NYJ1 87 aa5.54□□□□□ -1.52
SEC11A-210ENST00000560409 RCL1Q9Y2P8 373 aaKnown RBP5.54□□□□□ -1.52
SEC11A-210ENST00000560409 FAM96BQ9Y3D0 163 aa5.54□□□□□ -1.52
SEC11A-210ENST00000560409 CSPG4Q6UVK1 2322 aa5.54□□□□□ -1.52
SEC11A-210ENST00000560409 DOCK11Q5JSL3 2073 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 A0A0U1RQK1 487 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 C15orf61A6NNL5 157 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 SRRM4A7MD48 611 aaKnown RBP5.53□□□□□ -1.52
SEC11A-210ENST00000560409 K7EPK0 472 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 KBTBD11O94819 623 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 MPC2O95563 127 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 HRASP01112 189 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 CLEC3BP05452 202 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 PSMB6P28072 239 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 CD1BP29016 333 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 EIF2B2P49770 351 aaKnown RBP5.53□□□□□ -1.52
SEC11A-210ENST00000560409 OR2B8PP59922 312 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 S100A10P60903 97 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 FGL1Q08830 312 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 CXorf66Q5JRM2 361 aaPredicted RBP5.53□□□□□ -1.52
SEC11A-210ENST00000560409 GPR157Q5UAW9 335 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 CYB5R2Q6BCY4 276 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 PRSS54Q6PEW0 395 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 SSX9Q7RTT3 188 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 H2BFWTQ7Z2G1 175 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 NOXA1Q86UR1 476 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 FOXRED2Q8IWF2 684 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 PUSL1Q8N0Z8 303 aaKnown RBP5.53□□□□□ -1.52
SEC11A-210ENST00000560409 FAM71E2Q8N5Q1 922 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 Q8N6K4 173 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 DMBX1Q8NFW5 382 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 OR4C13Q8NGP0 309 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 OR1S1Q8NH92 325 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 GRPEL2Q8TAA5 225 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 FLYWCH2Q96CP2 140 aaKnown RBP5.53□□□□□ -1.52
SEC11A-210ENST00000560409 MALSU1Q96EH3 234 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 C11orf1Q9H5F2 150 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 OR5AC2Q9NZP5 309 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 GSKIPQ9P0R6 139 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 MBD2Q9UBB5 411 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 POMT1Q9Y6A1 747 aa5.53□□□□□ -1.52
SEC11A-210ENST00000560409 FN1P02751 2386 aaKnown RBP5.53□□□□□ -1.52
SEC11A-210ENST00000560409 ANK3Q12955 4377 aaKnown RBP5.53□□□□□ -1.52
SEC11A-210ENST00000560409 FXYD6-FXYD2A0A087WZ82 144 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 TRAV3A0A0B4J244 114 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 IGHV4-28A0A0C4DH34 117 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 USP17L23D6RBM5 183 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 UPK2O00526 184 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 ST8SIA3O43173 380 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 DEDDO75618 318 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 NDUFB4O95168 129 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 IGKV1D-33P01593 117 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 IGKV1-33P01594 117 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 SNRNP70P08621 437 aaKnown RBP5.52□□□□□ -1.53
SEC11A-210ENST00000560409 PET100P0DJ07 73 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 SLC25A4P12235 298 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 CD24P25063 80 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 CNTFRP26992 372 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 NKX2-1P43699 371 aaPredicted RBP5.52□□□□□ -1.53
SEC11A-210ENST00000560409 ARHGDIBP52566 201 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 UBE2KP61086 200 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 POLR2GP62487 172 aaKnown RBP eCLIP5.52□□□□□ -1.53
SEC11A-210ENST00000560409 EBI3Q14213 229 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 PSG5Q15238 335 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 MRGPRG-AS1Q2M3A8 158 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 SPNS3Q6ZMD2 512 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 C9orf62Q8N4C0 152 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 TMEM167AQ8TBQ9 72 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 RNF126Q9BV68 326 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 MAGT1Q9H0U3 335 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 TMEM14BQ9NUH8 114 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 BET1LQ9NYM9 111 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 TNFSF18Q9UNG2 199 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 FOXA2Q9Y261 457 aaPredicted RBP5.52□□□□□ -1.53
SEC11A-210ENST00000560409 NSG2Q9Y328 171 aa5.52□□□□□ -1.53
SEC11A-210ENST00000560409 LSM5Q9Y4Y9 91 aaKnown RBP5.52□□□□□ -1.53
SEC11A-210ENST00000560409 SOX21Q9Y651 276 aaPredicted RBP5.52□□□□□ -1.53
SEC11A-210ENST00000560409 NIPBLQ6KC79 2804 aaeCLIP5.52□□□□□ -1.53
SEC11A-210ENST00000560409 NSD1Q96L73 2696 aaPredicted RBP5.52□□□□□ -1.53
SEC11A-210ENST00000560409 C2CD3Q4AC94 2353 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms