RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 RITA1Q96K30 269 aa8.51□□□□□ -1.05
CRTC3-209ENST00000560320 JMJD1CQ15652 2540 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 NSD1Q96L73 2696 aaPredicted RBP8.5□□□□□ -1.05
CRTC3-209ENST00000560320 PLXNB1O43157 2135 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 IGHV3OR16-10A0A075B7F0 116 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 A0A096LNT2 108 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 RPS10-NUDT3A0A1W2PQS6 291 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 PMS2P5A8MQ11 134 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 UMAD1C9J7I0 102 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 TRIM77I1YAP6 450 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 ATP6V1G1O75348 118 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 NDUFA3O95167 84 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 CA2P00918 260 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 NMBP08949 121 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 FBP1P09467 338 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 OR13C7P0DN81 318 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 FGF7P21781 194 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 CAMLGP49069 296 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 COMPP49747 757 aaPredicted RBP8.5□□□□□ -1.05
CRTC3-209ENST00000560320 C5orf64Q2M2E5 130 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 LRRC75BQ2VPJ9 315 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 C2orf83Q53S99 150 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 RUSC1-AS1Q66K80 236 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 CYB5R2Q6BCY4 276 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 HAPLN4Q86UW8 402 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 SLC7A5P1Q8MH63 180 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 DYNAPQ8N1N2 210 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 PCNPQ8WW12 178 aaKnown RBP8.5□□□□□ -1.05
CRTC3-209ENST00000560320 RBMXL1Q96E39 390 aaKnown RBP8.5□□□□□ -1.05
CRTC3-209ENST00000560320 RASL11BQ9BPW5 248 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 SRSF8Q9BRL6 282 aaKnown RBP8.5□□□□□ -1.05
CRTC3-209ENST00000560320 TPSG1Q9NRR2 321 aa8.5□□□□□ -1.05
CRTC3-209ENST00000560320 FNDC10F2Z333 226 aa8.49□□□□□ -1.05
CRTC3-209ENST00000560320 CYB5BO43169 146 aa8.49□□□□□ -1.05
CRTC3-209ENST00000560320 FGF16O43320 207 aa8.49□□□□□ -1.05
CRTC3-209ENST00000560320 SOX15O60248 233 aa8.49□□□□□ -1.05
CRTC3-209ENST00000560320 MPDU1O75352 247 aa8.49□□□□□ -1.05
CRTC3-209ENST00000560320 IGHV4-31P0DP07 118 aa8.49□□□□□ -1.05
CRTC3-209ENST00000560320 CD24P25063 80 aa8.49□□□□□ -1.05
CRTC3-209ENST00000560320 PJVKQ0ZLH3 352 aa8.49□□□□□ -1.05
CRTC3-209ENST00000560320 RAB31Q13636 194 aa8.49□□□□□ -1.05
CRTC3-209ENST00000560320 TMEM249Q2WGJ8 235 aa8.49□□□□□ -1.05
CRTC3-209ENST00000560320 TMEM182Q6ZP80 229 aaPredicted RBP8.49□□□□□ -1.05
CRTC3-209ENST00000560320 COMMD7Q86VX2 200 aa8.49□□□□□ -1.05
CRTC3-209ENST00000560320 TEX29Q8N6K0 151 aa8.49□□□□□ -1.05
CRTC3-209ENST00000560320 OR10W1Q8NGF6 305 aa8.49□□□□□ -1.05
CRTC3-209ENST00000560320 C17orf50Q8WW18 174 aa8.49□□□□□ -1.05
CRTC3-209ENST00000560320 SRSF12Q8WXF0 261 aaKnown RBP8.49□□□□□ -1.05
CRTC3-209ENST00000560320 TAF15Q92804 592 aaKnown RBP eCLIP8.49□□□□□ -1.05
CRTC3-209ENST00000560320 PSMG3Q9BT73 122 aaPredicted RBP8.49□□□□□ -1.05
CRTC3-209ENST00000560320 TMUB1Q9BVT8 246 aa8.49□□□□□ -1.05
CRTC3-209ENST00000560320 WDR61Q9GZS3 305 aaKnown RBP8.49□□□□□ -1.05
CRTC3-209ENST00000560320 KCNIP2Q9NS61 270 aa8.49□□□□□ -1.05
CRTC3-209ENST00000560320 FBXO7Q9Y3I1 522 aa8.49□□□□□ -1.05
CRTC3-209ENST00000560320 TIMM9Q9Y5J7 89 aa8.49□□□□□ -1.05
CRTC3-209ENST00000560320 NUDT19A8MXV4 375 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 TEX46H3BTG2 121 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 CORTO00230 105 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 RNASE2P10153 161 aaKnown RBP8.48□□□□□ -1.05
CRTC3-209ENST00000560320 CD99P14209 185 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 S100A1P23297 94 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 PAX6P26367 422 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 RAB2AP61019 212 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 SERF2P84101 59 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 AKR1C1Q04828 323 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 FXYD3Q14802 87 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 VWC2Q2TAL6 325 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 TUSC1Q2TAM9 212 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 C10orf55Q5SWW7 151 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 ETFRF1Q6IPR1 90 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 DPPA3Q6W0C5 159 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 BRD3OSQ6XYD6 125 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 PIP4P2Q8N4L2 257 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 Q8N6K4 173 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 RNASEH2CQ8TDP1 164 aaKnown RBP8.48□□□□□ -1.05
CRTC3-209ENST00000560320 C22orf15Q8WYQ4 148 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 SLC35E1Q96K37 410 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 MEGF9Q9H1U4 602 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 SH3BGRL3Q9H299 93 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 NPVFQ9HCQ7 196 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 MED9Q9NWA0 146 aa8.48□□□□□ -1.05
CRTC3-209ENST00000560320 PRRC2AP48634 2157 aaKnown RBP8.47□□□□□ -1.05
CRTC3-209ENST00000560320 MBP02144 154 aa8.47□□□□□ -1.05
CRTC3-209ENST00000560320 IGHV4-38-2P0DP08 117 aa8.47□□□□□ -1.05
CRTC3-209ENST00000560320 GPX4P36969 197 aaPredicted RBP8.47□□□□□ -1.05
CRTC3-209ENST00000560320 RUNX1Q01196 453 aa8.47□□□□□ -1.05
CRTC3-209ENST00000560320 BSXQ3C1V8 233 aa8.47□□□□□ -1.05
CRTC3-209ENST00000560320 BTNL8Q6UX41 500 aa8.47□□□□□ -1.05
CRTC3-209ENST00000560320 ZNF562Q6V9R5 426 aa8.47□□□□□ -1.05
CRTC3-209ENST00000560320 Q6ZRG5 221 aa8.47□□□□□ -1.05
CRTC3-209ENST00000560320 MAPK1IP1LQ8NDC0 245 aa8.47□□□□□ -1.05
CRTC3-209ENST00000560320 OR1L6Q8NGR2 347 aa8.47□□□□□ -1.05
CRTC3-209ENST00000560320 NANPQ8TBE9 248 aa8.47□□□□□ -1.05
CRTC3-209ENST00000560320 FAM213BQ8TBF2 198 aa8.47□□□□□ -1.05
CRTC3-209ENST00000560320 SSMEM1Q8WWF3 244 aa8.47□□□□□ -1.05
CRTC3-209ENST00000560320 CACNG8Q8WXS5 425 aa8.47□□□□□ -1.05
CRTC3-209ENST00000560320 CXorf58Q96LI9 332 aa8.47□□□□□ -1.05
CRTC3-209ENST00000560320 SSX3Q99909 188 aa8.47□□□□□ -1.05
CRTC3-209ENST00000560320 FOXC2Q99958 501 aa8.47□□□□□ -1.05
CRTC3-209ENST00000560320 PARP11Q9NR21 331 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms