RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 SPANXN5Q5MJ07 72 aa14.23□□□□□ -0.13
CLPX-203ENST00000558958 Q8N2B8 174 aa14.23□□□□□ -0.13
CLPX-203ENST00000558958 OR4C12Q96R67 309 aa14.23□□□□□ -0.13
CLPX-203ENST00000558958 FAM24AA6NFZ4 105 aa14.22□□□□□ -0.13
CLPX-203ENST00000558958 HMSDA8MTL9 139 aa14.22□□□□□ -0.13
CLPX-203ENST00000558958 AP4M1O00189 453 aa14.22□□□□□ -0.13
CLPX-203ENST00000558958 IFNA10P01566 189 aa14.22□□□□□ -0.13
CLPX-203ENST00000558958 SNCAP37840 140 aa14.22□□□□□ -0.13
CLPX-203ENST00000558958 CAV2P51636 162 aa14.22□□□□□ -0.13
CLPX-203ENST00000558958 RPP30P78346 268 aaKnown RBP14.22□□□□□ -0.13
CLPX-203ENST00000558958 AKIRIN2Q53H80 203 aa14.22□□□□□ -0.13
CLPX-203ENST00000558958 C19orf54Q5BKX5 351 aa14.22□□□□□ -0.13
CLPX-203ENST00000558958 NOXA1Q86UR1 476 aa14.22□□□□□ -0.13
CLPX-203ENST00000558958 TTC9CQ8N5M4 171 aa14.22□□□□□ -0.13
CLPX-203ENST00000558958 ZNF114Q8NC26 417 aa14.22□□□□□ -0.13
CLPX-203ENST00000558958 SLC24A4Q8NFF2 622 aa14.22□□□□□ -0.13
CLPX-203ENST00000558958 TMEM170AQ8WVE7 144 aa14.22□□□□□ -0.13
CLPX-203ENST00000558958 HYLS1Q96M11 299 aa14.22□□□□□ -0.13
CLPX-203ENST00000558958 TMEM68Q96MH6 324 aa14.22□□□□□ -0.13
CLPX-203ENST00000558958 ZNF580Q9UK33 172 aa14.22□□□□□ -0.13
CLPX-203ENST00000558958 TNFSF18Q9UNG2 199 aa14.22□□□□□ -0.13
CLPX-203ENST00000558958 STRAPQ9Y3F4 350 aaKnown RBP14.22□□□□□ -0.13
CLPX-203ENST00000558958 C15orf62A8K5M9 175 aa14.21□□□□□ -0.13
CLPX-203ENST00000558958 NPIPB5A8MRT5 1133 aa14.21□□□□□ -0.13
CLPX-203ENST00000558958 G3V318 75 aa14.21□□□□□ -0.13
CLPX-203ENST00000558958 CRYGCP07315 174 aa14.21□□□□□ -0.13
CLPX-203ENST00000558958 RNASE2P10153 161 aaKnown RBP14.21□□□□□ -0.13
CLPX-203ENST00000558958 CTRB1P17538 263 aa14.21□□□□□ -0.13
CLPX-203ENST00000558958 TMEM267Q0VDI3 215 aaPredicted RBP14.21□□□□□ -0.13
CLPX-203ENST00000558958 ECSCRQ19T08 205 aa14.21□□□□□ -0.13
CLPX-203ENST00000558958 CTRB2Q6GPI1 263 aa14.21□□□□□ -0.13
CLPX-203ENST00000558958 UNQ5815/PRO19632Q6UWF5 114 aa14.21□□□□□ -0.13
CLPX-203ENST00000558958 TMEM14EPQ6UXP3 125 aa14.21□□□□□ -0.13
CLPX-203ENST00000558958 P2RX4Q99571 388 aa14.21□□□□□ -0.13
CLPX-203ENST00000558958 LINC00527Q9UJ94 153 aa14.21□□□□□ -0.13
CLPX-203ENST00000558958 TRAV41A0A0B4J266 112 aa14.2□□□□□ -0.14
CLPX-203ENST00000558958 IGSF23A1L1A6 192 aa14.2□□□□□ -0.14
CLPX-203ENST00000558958 ARPC5O15511 151 aa14.2□□□□□ -0.14
CLPX-203ENST00000558958 HKR1P10072 659 aa14.2□□□□□ -0.14
CLPX-203ENST00000558958 NPY1RP25929 384 aa14.2□□□□□ -0.14
CLPX-203ENST00000558958 RPL12P30050 165 aaKnown RBP14.2□□□□□ -0.14
CLPX-203ENST00000558958 ATP5IP56385 69 aaPredicted RBP14.2□□□□□ -0.14
CLPX-203ENST00000558958 TMEM95Q3KNT9 176 aa14.2□□□□□ -0.14
CLPX-203ENST00000558958 C2orf83Q53S99 150 aa14.2□□□□□ -0.14
CLPX-203ENST00000558958 C19orf35Q6ZS72 473 aa14.2□□□□□ -0.14
CLPX-203ENST00000558958 TMEM252Q8N6L7 170 aa14.2□□□□□ -0.14
CLPX-203ENST00000558958 PPP1R14BQ96C90 147 aa14.2□□□□□ -0.14
CLPX-203ENST00000558958 NOL4LQ96MY1 436 aaPredicted RBP14.2□□□□□ -0.14
CLPX-203ENST00000558958 RNF222A6NCQ9 220 aa14.19□□□□□ -0.14
CLPX-203ENST00000558958 BOLA2-SMG1P6H3BVE0 249 aa14.19□□□□□ -0.14
CLPX-203ENST00000558958 FBXO24O75426 580 aa14.19□□□□□ -0.14
CLPX-203ENST00000558958 TSPAN9O75954 239 aa14.19□□□□□ -0.14
CLPX-203ENST00000558958 CRYBA1P05813 215 aa14.19□□□□□ -0.14
CLPX-203ENST00000558958 SUB1P53999 127 aaKnown RBP eCLIP14.19□□□□□ -0.14
CLPX-203ENST00000558958 Q6ZSV7 163 aa14.19□□□□□ -0.14
CLPX-203ENST00000558958 STPG2Q8N412 459 aa14.19□□□□□ -0.14
CLPX-203ENST00000558958 INO80EQ8NBZ0 244 aaPredicted RBP14.19□□□□□ -0.14
CLPX-203ENST00000558958 OR5T1Q8NG75 326 aa14.19□□□□□ -0.14
CLPX-203ENST00000558958 OR1P1Q8NH06 330 aa14.19□□□□□ -0.14
CLPX-203ENST00000558958 FAM110DQ8TAY7 271 aaPredicted RBP14.19□□□□□ -0.14
CLPX-203ENST00000558958 AQP10Q96PS8 301 aa14.19□□□□□ -0.14
CLPX-203ENST00000558958 WNT10AQ9GZT5 417 aa14.19□□□□□ -0.14
CLPX-203ENST00000558958 SLC25A31Q9H0C2 315 aa14.19□□□□□ -0.14
CLPX-203ENST00000558958 F11RQ9Y624 299 aaKnown RBP14.19□□□□□ -0.14
CLPX-203ENST00000558958 METTL15P1P0C7V9 234 aa14.18□□□□□ -0.14
CLPX-203ENST00000558958 NUP62P37198 522 aaPredicted RBP14.18□□□□□ -0.14
CLPX-203ENST00000558958 MFAP2P55001 183 aa14.18□□□□□ -0.14
CLPX-203ENST00000558958 EWSR1Q01844 656 aaKnown RBP eCLIP14.18□□□□□ -0.14
CLPX-203ENST00000558958 ARSJQ5FYB0 599 aaPredicted RBP14.18□□□□□ -0.14
CLPX-203ENST00000558958 PVRIGQ6DKI7 326 aa14.18□□□□□ -0.14
CLPX-203ENST00000558958 ACOT7LQ6ZUV0 252 aa14.18□□□□□ -0.14
CLPX-203ENST00000558958 PAIP2BQ9ULR5 123 aaKnown RBP14.18□□□□□ -0.14
CLPX-203ENST00000558958 HNRNPCP07910 306 aaKnown RBP eCLIP14.18□□□□□ -0.14
CLPX-203ENST00000558958 OR8U8P0C7N1 319 aa14.18□□□□□ -0.14
CLPX-203ENST00000558958 SULT1A1P50225 295 aa14.18□□□□□ -0.14
CLPX-203ENST00000558958 RAB11AP62491 216 aa14.18□□□□□ -0.14
CLPX-203ENST00000558958 STX12Q86Y82 276 aa14.18□□□□□ -0.14
CLPX-203ENST00000558958 TAF15Q92804 592 aaKnown RBP eCLIP14.18□□□□□ -0.14
CLPX-203ENST00000558958 MFFQ9GZY8 342 aa14.18□□□□□ -0.14
CLPX-203ENST00000558958 DMRT1Q9Y5R6 373 aa14.18□□□□□ -0.14
CLPX-203ENST00000558958 PMS2P5A8MQ11 134 aa14.17□□□□□ -0.14
CLPX-203ENST00000558958 CST7O76096 145 aa14.17□□□□□ -0.14
CLPX-203ENST00000558958 DEFA4P12838 97 aa14.17□□□□□ -0.14
CLPX-203ENST00000558958 PPIFP30405 207 aaKnown RBP14.17□□□□□ -0.14
CLPX-203ENST00000558958 EIF2B2P49770 351 aaKnown RBP14.17□□□□□ -0.14
CLPX-203ENST00000558958 NKX2-5P52952 324 aaPredicted RBP14.17□□□□□ -0.14
CLPX-203ENST00000558958 NHLH2Q02577 135 aa14.17□□□□□ -0.14
CLPX-203ENST00000558958 CFHR3Q02985 330 aa14.17□□□□□ -0.14
CLPX-203ENST00000558958 BAXQ07812 192 aa14.17□□□□□ -0.14
CLPX-203ENST00000558958 HAPLN4Q86UW8 402 aa14.17□□□□□ -0.14
CLPX-203ENST00000558958 OR1L6Q8NGR2 347 aa14.17□□□□□ -0.14
CLPX-203ENST00000558958 OR2T6Q8NHC8 308 aa14.17□□□□□ -0.14
CLPX-203ENST00000558958 SERTAD4Q9NUC0 356 aa14.17□□□□□ -0.14
CLPX-203ENST00000558958 SOX15O60248 233 aa14.16□□□□□ -0.14
CLPX-203ENST00000558958 PRH1P02810 166 aa14.16□□□□□ -0.14
CLPX-203ENST00000558958 IFNA4P05014 189 aa14.16□□□□□ -0.14
CLPX-203ENST00000558958 CXCL2P19875 107 aa14.16□□□□□ -0.14
CLPX-203ENST00000558958 OR2F1Q13607 317 aa14.16□□□□□ -0.14
CLPX-203ENST00000558958 KLK9Q2XQG4 91 aa14.16□□□□□ -0.14
CLPX-203ENST00000558958 SLC25A24Q6NUK1 477 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms