RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 CD33P20138 364 aa12.79□□□□□ -0.36
AP4E1-202ENST00000558439 ZNF137PP52743 207 aa12.79□□□□□ -0.36
AP4E1-202ENST00000558439 LHFPL4Q7Z7J7 247 aa12.79□□□□□ -0.36
AP4E1-202ENST00000558439 OR2T6Q8NHC8 308 aa12.79□□□□□ -0.36
AP4E1-202ENST00000558439 SERTM2A0A1B0GWG4 89 aa12.79□□□□□ -0.36
AP4E1-202ENST00000558439 FOXH1O75593 365 aa12.79□□□□□ -0.36
AP4E1-202ENST00000558439 AMBPP02760 352 aa12.79□□□□□ -0.36
AP4E1-202ENST00000558439 CD3EP07766 207 aa12.79□□□□□ -0.36
AP4E1-202ENST00000558439 WDR73Q6P4I2 378 aa12.79□□□□□ -0.36
AP4E1-202ENST00000558439 SNRNP40Q96DI7 357 aaKnown RBP12.79□□□□□ -0.36
AP4E1-202ENST00000558439 TIMD4Q96H15 378 aa12.79□□□□□ -0.36
AP4E1-202ENST00000558439 GCGP01275 180 aa12.78□□□□□ -0.36
AP4E1-202ENST00000558439 DUX4L9Q6RFH8 374 aaPredicted RBP12.78□□□□□ -0.36
AP4E1-202ENST00000558439 MGST2Q99735 147 aa12.78□□□□□ -0.36
AP4E1-202ENST00000558439 RNASE7Q9H1E1 156 aaKnown RBP12.78□□□□□ -0.36
AP4E1-202ENST00000558439 SLC25A15Q9Y619 301 aa12.78□□□□□ -0.36
AP4E1-202ENST00000558439 ARL2-SNX15V9GYD0 113 aa12.78□□□□□ -0.36
AP4E1-202ENST00000558439 C15orf61A6NNL5 157 aa12.78□□□□□ -0.36
AP4E1-202ENST00000558439 SAA1P0DJI8 122 aaPredicted RBP12.78□□□□□ -0.36
AP4E1-202ENST00000558439 PRB4P10163 310 aaPredicted RBP12.78□□□□□ -0.36
AP4E1-202ENST00000558439 TMEM183BQ1AE95 376 aa12.78□□□□□ -0.36
AP4E1-202ENST00000558439 C10orf55Q5SWW7 151 aa12.78□□□□□ -0.36
AP4E1-202ENST00000558439 LINC01551Q86U37 167 aa12.78□□□□□ -0.36
AP4E1-202ENST00000558439 TMEM242Q9NWH2 141 aa12.78□□□□□ -0.36
AP4E1-202ENST00000558439 PGPA6NDG6 321 aa12.78□□□□□ -0.36
AP4E1-202ENST00000558439 PRRX1P54821 245 aa12.78□□□□□ -0.36
AP4E1-202ENST00000558439 PRR7Q8TB68 274 aa12.78□□□□□ -0.36
AP4E1-202ENST00000558439 NOL4LQ96MY1 436 aaPredicted RBP12.78□□□□□ -0.36
AP4E1-202ENST00000558439 DCAF16Q9NXF7 216 aa12.78□□□□□ -0.36
AP4E1-202ENST00000558439 M0R143 59 aa12.77□□□□□ -0.36
AP4E1-202ENST00000558439 TDGF1P13385 188 aa12.77□□□□□ -0.36
AP4E1-202ENST00000558439 AMMECR1Q9Y4X0 333 aaPredicted RBP12.77□□□□□ -0.36
AP4E1-202ENST00000558439 ETFRF1Q6IPR1 90 aa12.77□□□□□ -0.36
AP4E1-202ENST00000558439 SEBOXQ9HB31 216 aaPredicted RBP12.77□□□□□ -0.36
AP4E1-202ENST00000558439 K7EQM0 130 aa12.77□□□□□ -0.37
AP4E1-202ENST00000558439 DLL1O00548 723 aa12.77□□□□□ -0.37
AP4E1-202ENST00000558439 GFRA3O60609 400 aa12.77□□□□□ -0.37
AP4E1-202ENST00000558439 IGHV1-46P01743 117 aa12.77□□□□□ -0.37
AP4E1-202ENST00000558439 CT45A10P0DMU9 189 aa12.77□□□□□ -0.37
AP4E1-202ENST00000558439 BSPH1Q075Z2 132 aa12.77□□□□□ -0.37
AP4E1-202ENST00000558439 CDPF1Q6NVV7 123 aa12.77□□□□□ -0.37
AP4E1-202ENST00000558439 TNFRSF19Q9NS68 423 aa12.77□□□□□ -0.37
AP4E1-202ENST00000558439 CFAP54Q96N23 3096 aa12.77□□□□□ -0.37
AP4E1-202ENST00000558439 TCAPO15273 167 aa12.77□□□□□ -0.37
AP4E1-202ENST00000558439 RPL27AP46776 148 aaKnown RBP12.77□□□□□ -0.37
AP4E1-202ENST00000558439 ZNF474Q6S9Z5 364 aaPredicted RBP12.77□□□□□ -0.37
AP4E1-202ENST00000558439 TMEM170AQ8WVE7 144 aa12.77□□□□□ -0.37
AP4E1-202ENST00000558439 SFXN3Q9BWM7 321 aa12.77□□□□□ -0.37
AP4E1-202ENST00000558439 HILPDAQ9Y5L2 63 aa12.77□□□□□ -0.37
AP4E1-202ENST00000558439 SCGB2A1O75556 95 aa12.76□□□□□ -0.37
AP4E1-202ENST00000558439 APCSP02743 223 aa12.76□□□□□ -0.37
AP4E1-202ENST00000558439 RNF224P0DH78 156 aa12.76□□□□□ -0.37
AP4E1-202ENST00000558439 SRIP30626 198 aa12.76□□□□□ -0.37
AP4E1-202ENST00000558439 LCN2P80188 198 aa12.76□□□□□ -0.37
AP4E1-202ENST00000558439 RELBQ01201 579 aa12.76□□□□□ -0.37
AP4E1-202ENST00000558439 KRTCAP3Q53RY4 240 aa12.76□□□□□ -0.37
AP4E1-202ENST00000558439 OR4C13Q8NGP0 309 aa12.76□□□□□ -0.37
AP4E1-202ENST00000558439 GNB4Q9HAV0 340 aa12.76□□□□□ -0.37
AP4E1-202ENST00000558439 A0A1B0GUS0 222 aa12.76□□□□□ -0.37
AP4E1-202ENST00000558439 IGHG3P01860 377 aa12.76□□□□□ -0.37
AP4E1-202ENST00000558439 LMO1P25800 156 aa12.76□□□□□ -0.37
AP4E1-202ENST00000558439 PRR31Q5SQ13 230 aa12.76□□□□□ -0.37
AP4E1-202ENST00000558439 KLF2Q9Y5W3 355 aaPredicted RBP12.76□□□□□ -0.37
AP4E1-202ENST00000558439 TIMP3P35625 211 aa12.76□□□□□ -0.37
AP4E1-202ENST00000558439 TMEM256Q8N2U0 113 aa12.76□□□□□ -0.37
AP4E1-202ENST00000558439 ABHD17AQ96GS6 310 aa12.76□□□□□ -0.37
AP4E1-202ENST00000558439 IFI27L2Q9H2X8 130 aa12.76□□□□□ -0.37
AP4E1-202ENST00000558439 WASHC3Q9Y3C0 194 aa12.76□□□□□ -0.37
AP4E1-202ENST00000558439 C20orf202A1L168 122 aa12.75□□□□□ -0.37
AP4E1-202ENST00000558439 DIRC3C9JPN6 131 aa12.75□□□□□ -0.37
AP4E1-202ENST00000558439 BRS3P32247 399 aa12.75□□□□□ -0.37
AP4E1-202ENST00000558439 MMDQ15546 238 aa12.75□□□□□ -0.37
AP4E1-202ENST00000558439 MBNL2Q5VZF2 373 aaKnown RBP12.75□□□□□ -0.37
AP4E1-202ENST00000558439 CHRDL1Q9BU40 450 aa12.75□□□□□ -0.37
AP4E1-202ENST00000558439 STAG3L2P0CL84 134 aa12.75□□□□□ -0.37
AP4E1-202ENST00000558439 STAG3L3P0CL85 134 aa12.75□□□□□ -0.37
AP4E1-202ENST00000558439 ZNF430Q9H8G1 570 aaPredicted RBP12.75□□□□□ -0.37
AP4E1-202ENST00000558439 CUL9Q8IWT3 2517 aa12.75□□□□□ -0.37
AP4E1-202ENST00000558439 TRAV5A0A0B4J249 113 aa12.75□□□□□ -0.37
AP4E1-202ENST00000558439 CA1P00915 261 aaPredicted RBP12.75□□□□□ -0.37
AP4E1-202ENST00000558439 IGKV1-16P04430 117 aa12.75□□□□□ -0.37
AP4E1-202ENST00000558439 WT1P19544 449 aaPredicted RBP12.75□□□□□ -0.37
AP4E1-202ENST00000558439 ADMP35318 185 aa12.75□□□□□ -0.37
AP4E1-202ENST00000558439 HNRNPA3P51991 378 aaKnown RBP12.75□□□□□ -0.37
AP4E1-202ENST00000558439 ZNF134P52741 427 aa12.75□□□□□ -0.37
AP4E1-202ENST00000558439 REC114Q7Z4M0 266 aa12.75□□□□□ -0.37
AP4E1-202ENST00000558439 FAM222BQ8WU58 562 aa12.75□□□□□ -0.37
AP4E1-202ENST00000558439 RNF2Q99496 336 aa12.75□□□□□ -0.37
AP4E1-202ENST00000558439 ATG101Q9BSB4 218 aa12.75□□□□□ -0.37
AP4E1-202ENST00000558439 MUC6Q6W4X9 2439 aa12.74□□□□□ -0.37
AP4E1-202ENST00000558439 LYNX1G3V0Z9 82 aa12.74□□□□□ -0.37
AP4E1-202ENST00000558439 M0R2Z0 102 aa12.74□□□□□ -0.37
AP4E1-202ENST00000558439 NDUFS6O75380 124 aaKnown RBP12.74□□□□□ -0.37
AP4E1-202ENST00000558439 LYNX1P0DP58 116 aa12.74□□□□□ -0.37
AP4E1-202ENST00000558439 COL8A1P27658 744 aa12.74□□□□□ -0.37
AP4E1-202ENST00000558439 C11orf53Q8IXP5 236 aa12.74□□□□□ -0.37
AP4E1-202ENST00000558439 PERPQ96FX8 193 aa12.74□□□□□ -0.37
AP4E1-202ENST00000558439 UPK2O00526 184 aa12.74□□□□□ -0.37
AP4E1-202ENST00000558439 RBFOX2O43251 390 aaKnown RBP eCLIP12.74□□□□□ -0.37
AP4E1-202ENST00000558439 TEX38Q6PEX7 206 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms