RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 C3orf56Q8N813 242 aa9.41□□□□□ -0.9
HMGB1P8-201ENST00000558211 LRTM2Q8N967 370 aa9.41□□□□□ -0.9
HMGB1P8-201ENST00000558211 OR1L8Q8NGR8 309 aa9.41□□□□□ -0.9
HMGB1P8-201ENST00000558211 MITD1Q8WV92 249 aa9.41□□□□□ -0.9
HMGB1P8-201ENST00000558211 LSM10Q969L4 123 aaKnown RBP9.41□□□□□ -0.9
HMGB1P8-201ENST00000558211 SPIN2AQ99865 258 aa9.41□□□□□ -0.9
HMGB1P8-201ENST00000558211 SPIN2BQ9BPZ2 258 aa9.41□□□□□ -0.9
HMGB1P8-201ENST00000558211 PDCD10Q9BUL8 212 aa9.41□□□□□ -0.9
HMGB1P8-201ENST00000558211 GON7Q9BXV9 100 aa9.41□□□□□ -0.9
HMGB1P8-201ENST00000558211 GPN1Q9HCN4 374 aaPredicted RBP9.41□□□□□ -0.9
HMGB1P8-201ENST00000558211 FKBP11Q9NYL4 201 aa9.41□□□□□ -0.9
HMGB1P8-201ENST00000558211 PIGBOS1A0A0B4J2F0 54 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 A0A1B0GW64 132 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 DUXBA0A1W2PPF3 345 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 CGB1A6NKQ9 187 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 ST8SIA3O43173 380 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 IFNA21P01568 189 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 REG1AP05451 166 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 TRAPPC2P0DI81 140 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 TRAPPC2BP0DI82 140 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 SULT1A3P0DMM9 295 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 SULT1A4P0DMN0 295 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 CD28P10747 220 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 AKIRIN2Q53H80 203 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 KHDC1LQ5JSQ8 128 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 ASPHD1Q5U4P2 390 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 CADM3Q8N126 398 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 OR10W1Q8NGF6 305 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 OR1S1Q8NH92 325 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 MS4A10Q96PG2 267 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 TMEM14BQ9NUH8 114 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 COA4Q9NYJ1 87 aa9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 FOXA2Q9Y261 457 aaPredicted RBP9.4□□□□□ -0.9
HMGB1P8-201ENST00000558211 C13orf42A0A1B0GVH6 325 aa9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 FAM25EA8MYX2 175 aa9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 TEX22C9J3V5 150 aa9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 CCSO14618 274 aa9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 PRAF2O60831 178 aa9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 AREGP15514 252 aa9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 PPIFP30405 207 aaKnown RBP9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 CRIP2P52943 208 aaPredicted RBP9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 HSPE1P61604 102 aaKnown RBP9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 CD83Q01151 205 aa9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 SMCO1Q147U7 214 aa9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 NMSQ5H8A3 153 aa9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 THOC7Q6I9Y2 204 aaKnown RBP9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 TEX38Q6PEX7 206 aa9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 C19orf35Q6ZS72 473 aa9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 NUDT10Q8NFP7 164 aa9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 OR4X2Q8NGF9 303 aa9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 OR5B3Q8NH48 314 aa9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 NUDT11Q96G61 164 aa9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 NDUFA4L2Q9NRX3 87 aa9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 TMED3Q9Y3Q3 217 aa9.39□□□□□ -0.91
HMGB1P8-201ENST00000558211 COL6A5A8TX70 2615 aa9.38□□□□□ -0.91
HMGB1P8-201ENST00000558211 A0A1B0GU03 582 aa9.38□□□□□ -0.91
HMGB1P8-201ENST00000558211 A0A1W2PRX2 142 aa9.38□□□□□ -0.91
HMGB1P8-201ENST00000558211 TCRBV4S1A1TA0A5B7 111 aa9.38□□□□□ -0.91
HMGB1P8-201ENST00000558211 MPTX1A8MV57 137 aa9.38□□□□□ -0.91
HMGB1P8-201ENST00000558211 SOX15O60248 233 aa9.38□□□□□ -0.91
HMGB1P8-201ENST00000558211 PRH1P02810 166 aa9.38□□□□□ -0.91
HMGB1P8-201ENST00000558211 FGF2P09038 288 aa9.38□□□□□ -0.91
HMGB1P8-201ENST00000558211 OR13C7P0DN81 318 aa9.38□□□□□ -0.91
HMGB1P8-201ENST00000558211 HOXA5P20719 270 aa9.38□□□□□ -0.91
HMGB1P8-201ENST00000558211 CFHR3Q02985 330 aa9.38□□□□□ -0.91
HMGB1P8-201ENST00000558211 TMEM65Q6PI78 240 aa9.38□□□□□ -0.91
HMGB1P8-201ENST00000558211 ZNF429Q86V71 674 aa9.38□□□□□ -0.91
HMGB1P8-201ENST00000558211 MINDY2Q8NBR6 621 aa9.38□□□□□ -0.91
HMGB1P8-201ENST00000558211 TMEM68Q96MH6 324 aa9.38□□□□□ -0.91
HMGB1P8-201ENST00000558211 KLK15Q9H2R5 256 aa9.38□□□□□ -0.91
HMGB1P8-201ENST00000558211 ENY2Q9NPA8 101 aa9.38□□□□□ -0.91
HMGB1P8-201ENST00000558211 IGLC7A0M8Q6 106 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 C5orf51A6NDU8 294 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 CEBPZOSA8MTT3 80 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 SNRPGP15A8MWD9 76 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 SSNA1O43805 119 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 IGHG4P01861 327 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 DEFA4P12838 97 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 PSMB6P28072 239 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 HOXA1P49639 335 aaPredicted RBP9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 PRCDQ00LT1 54 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 DEFA5Q01523 94 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 TATDN3Q17R31 274 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 KRTAP21-3Q3LHN1 58 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 C19orf54Q5BKX5 351 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 TCTEX1D4Q5JR98 221 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 CXorf66Q5JRM2 361 aaPredicted RBP9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 TTC9CQ8N5M4 171 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 OR5M8Q8NGP6 311 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 FAM110DQ8TAY7 271 aaPredicted RBP9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 WIPF2Q8TF74 440 aaPredicted RBP9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 CITED2Q99967 270 aaPredicted RBP9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 ZNF747Q9BV97 191 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 PLEKHA3Q9HB20 300 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 GSKIPQ9P0R6 139 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 ZNF580Q9UK33 172 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 ZNF257Q9Y2Q1 563 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 ALG5Q9Y673 324 aa9.37□□□□□ -0.91
HMGB1P8-201ENST00000558211 GOSR2O14653 212 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms