RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 NEURL3Q96EH8 262 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 ZC2HC1AQ96GY0 325 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 AP1S3Q96PC3 154 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 TSPAN32Q96QS1 320 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 MGLLQ99685 303 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 PRADC1Q9BSG0 188 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 ZNF436Q9C0F3 470 aaPredicted RBP1.75□□□□□ -2.13
SPG11-206ENST00000558093 CXorf21Q9HAI6 301 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 TVP23BQ9NYZ1 205 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 OR5AC2Q9NZP5 309 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 METTL1Q9UBP6 276 aaKnown RBP1.75□□□□□ -2.13
SPG11-206ENST00000558093 MARCOQ9UEW3 520 aaPredicted RBP1.75□□□□□ -2.13
SPG11-206ENST00000558093 ANAPC10Q9UM13 185 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 POMPQ9Y244 141 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 KLF13Q9Y2Y9 288 aaPredicted RBP1.75□□□□□ -2.13
SPG11-206ENST00000558093 MED31Q9Y3C7 131 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 F11RQ9Y624 299 aaKnown RBP1.75□□□□□ -2.13
SPG11-206ENST00000558093 HSPE1-MOB4S4R3N1 261 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 DENND4CQ5VZ89 1909 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 NLRC5Q86WI3 1866 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 ARHGEF11O15085 1522 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 PARP14Q460N5 1801 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 MED14O60244 1454 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 MBD5Q9P267 1494 aa1.75□□□□□ -2.13
SPG11-206ENST00000558093 LRRIQ1Q96JM4 1722 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 CHD3Q12873 2000 aaKnown RBP1.74□□□□□ -2.13
SPG11-206ENST00000558093 TONSLQ96HA7 1378 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 ADGBQ8N7X0 1667 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 ZFC3H1O60293 1989 aaKnown RBP1.74□□□□□ -2.13
SPG11-206ENST00000558093 TICRRQ7Z2Z1 1910 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 SYNJ1O43426 1573 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 IGKV1-27A0A075B6S5 117 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 TRAV39A0A0B4J263 110 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 TRAV4A0A0B4J268 109 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 IGHV1-69DA0A0B4J2H0 117 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 IGKV1-8A0A0C4DH67 115 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 SMIM31A0A1B0GVY4 71 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 C4orf51C9J302 202 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 J3QR89 54 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 K7EPK0 472 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 DNASE2O00115 360 aaPredicted RBP1.74□□□□□ -2.13
SPG11-206ENST00000558093 UPK2O00526 184 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 ISLRO14498 428 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 OVOL1O14753 267 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 PSPHP1O15172 72 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 MPC2O95563 127 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 MT-ND4LP03901 98 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 SCTP09683 121 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 BCL2P10415 239 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 CSRP1P21291 193 aaKnown RBP1.74□□□□□ -2.13
SPG11-206ENST00000558093 RPS4Y1P22090 263 aaKnown RBP1.74□□□□□ -2.13
SPG11-206ENST00000558093 GABRA3P34903 492 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 LPAR6P43657 344 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 GNG4P50150 75 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 P2RX1P51575 399 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 ZNF138P52744 262 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 TAS2R20P59543 309 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 C1QTNF8P60827 252 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 S100A10P60903 97 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 PPP1CAP62136 330 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 HERVK_113P63121 156 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 FABP9Q0Z7S8 132 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 ENDOGQ14249 297 aaKnown RBP1.74□□□□□ -2.13
SPG11-206ENST00000558093 BCL2L15Q5TBC7 163 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 Q5XG85 94 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 WDR59Q6PJI9 974 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 UNQ9165/PRO28630Q6UXU0 137 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 TEX43Q6ZNM6 134 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 SLC22A24Q8N4F4 322 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 MMGT1Q8N4V1 131 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 OR11G2Q8NGC1 345 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 OR5A2Q8NGI9 324 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 OR4C16Q8NGL9 310 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 OR52P1PQ8NH57 321 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 OR5K1Q8NHB7 308 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 LMX1AQ8TE12 382 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 GALNT14Q96FL9 552 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 ERMAPQ96PL5 475 aaPredicted RBP1.74□□□□□ -2.13
SPG11-206ENST00000558093 NMNAT3Q96T66 252 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 MRPL57Q9BQC6 102 aaKnown RBP1.74□□□□□ -2.13
SPG11-206ENST00000558093 THTPAQ9BU02 230 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 TMEM243Q9BU79 118 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 SFXN3Q9BWM7 321 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 MRPL20Q9BYC9 149 aaKnown RBP1.74□□□□□ -2.13
SPG11-206ENST00000558093 PRO1933Q9H354 126 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 C11orf68Q9H3H3 251 aaKnown RBP1.74□□□□□ -2.13
SPG11-206ENST00000558093 Q9H521 79 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 RPP21Q9H633 154 aaKnown RBP1.74□□□□□ -2.13
SPG11-206ENST00000558093 ZNF355PQ9NSJ1 428 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 TMEM216Q9P0N5 145 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 LINC00527Q9UJ94 153 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 PCTPQ9UKL6 214 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 BOKQ9UMX3 212 aaPredicted RBP1.74□□□□□ -2.13
SPG11-206ENST00000558093 COQ4Q9Y3A0 265 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 AMMECR1Q9Y4X0 333 aaPredicted RBP1.74□□□□□ -2.13
SPG11-206ENST00000558093 HES2Q9Y543 173 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 PCYT1BQ9Y5K3 369 aaPredicted RBP1.74□□□□□ -2.13
SPG11-206ENST00000558093 TMEM14AQ9Y6G1 99 aa1.74□□□□□ -2.13
SPG11-206ENST00000558093 ANKRD36BQ8N2N9 1353 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 TMEM2Q9UHN6 1383 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 426.7 ms