RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 LOC100506127A0A0U1RQW1 187 aa11.75□□□□□ -0.53
SCFD1-224ENST00000557713 XRCC3O43542 346 aa11.75□□□□□ -0.53
SCFD1-224ENST00000557713 KRASP01116 189 aa11.75□□□□□ -0.53
SCFD1-224ENST00000557713 RLN1P04808 185 aa11.75□□□□□ -0.53
SCFD1-224ENST00000557713 FCGR2BP31994 310 aaPredicted RBP11.75□□□□□ -0.53
SCFD1-224ENST00000557713 RFX2P48378 723 aa11.75□□□□□ -0.53
SCFD1-224ENST00000557713 APRG1Q8IVJ8 170 aa11.75□□□□□ -0.53
SCFD1-224ENST00000557713 RPP25LQ8N5L8 163 aaKnown RBP11.75□□□□□ -0.53
SCFD1-224ENST00000557713 UBAC2Q8NBM4 344 aa11.75□□□□□ -0.53
SCFD1-224ENST00000557713 DGCR14Q96DF8 476 aaKnown RBP11.75□□□□□ -0.53
SCFD1-224ENST00000557713 RNF2Q99496 336 aa11.75□□□□□ -0.53
SCFD1-224ENST00000557713 ZNF2Q9BSG1 426 aaPredicted RBP11.75□□□□□ -0.53
SCFD1-224ENST00000557713 EHFQ9NZC4 300 aa11.75□□□□□ -0.53
SCFD1-224ENST00000557713 ANAPC10Q9UM13 185 aa11.75□□□□□ -0.53
SCFD1-224ENST00000557713 CHEK1O14757 476 aa11.74□□□□□ -0.53
SCFD1-224ENST00000557713 TMEM127O75204 238 aa11.74□□□□□ -0.53
SCFD1-224ENST00000557713 SNAPC5O75971 98 aa11.74□□□□□ -0.53
SCFD1-224ENST00000557713 G6PCP35575 357 aa11.74□□□□□ -0.53
SCFD1-224ENST00000557713 Q56UQ5 140 aa11.74□□□□□ -0.53
SCFD1-224ENST00000557713 PHLDA1Q8WV24 401 aaPredicted RBP11.74□□□□□ -0.53
SCFD1-224ENST00000557713 RHPN1-AS1Q9BWJ2 59 aa11.74□□□□□ -0.53
SCFD1-224ENST00000557713 KRTAP17-1Q9BYP8 105 aa11.74□□□□□ -0.53
SCFD1-224ENST00000557713 IGHV7-4-1A0A0J9YVY3 117 aa11.73□□□□□ -0.53
SCFD1-224ENST00000557713 DBX1A6NMT0 343 aa11.73□□□□□ -0.53
SCFD1-224ENST00000557713 PMP2P02689 132 aa11.73□□□□□ -0.53
SCFD1-224ENST00000557713 NAT1P18440 290 aa11.73□□□□□ -0.53
SCFD1-224ENST00000557713 CMC4P56277 68 aaPredicted RBP11.73□□□□□ -0.53
SCFD1-224ENST00000557713 ZNF124Q15973 351 aa11.73□□□□□ -0.53
SCFD1-224ENST00000557713 LGALS9CQ6DKI2 356 aa11.73□□□□□ -0.53
SCFD1-224ENST00000557713 OR1P1Q8NH06 330 aa11.73□□□□□ -0.53
SCFD1-224ENST00000557713 S100A16Q96FQ6 103 aaKnown RBP11.73□□□□□ -0.53
SCFD1-224ENST00000557713 OR10C1Q96KK4 312 aa11.73□□□□□ -0.53
SCFD1-224ENST00000557713 TMEM56Q96MV1 263 aa11.73□□□□□ -0.53
SCFD1-224ENST00000557713 CSTL1Q9H114 145 aa11.73□□□□□ -0.53
SCFD1-224ENST00000557713 IFT46Q9NQC8 304 aa11.73□□□□□ -0.53
SCFD1-224ENST00000557713 TMEM14BQ9NUH8 114 aa11.73□□□□□ -0.53
SCFD1-224ENST00000557713 FKBP11Q9NYL4 201 aa11.73□□□□□ -0.53
SCFD1-224ENST00000557713 PRNDQ9UKY0 176 aa11.73□□□□□ -0.53
SCFD1-224ENST00000557713 I3L2K1 104 aa11.72□□□□□ -0.53
SCFD1-224ENST00000557713 FAM90A2PQ658T7 463 aa11.72□□□□□ -0.53
SCFD1-224ENST00000557713 CMTM1Q8IZ96 169 aa11.72□□□□□ -0.53
SCFD1-224ENST00000557713 TMEM116Q8NCL8 245 aa11.72□□□□□ -0.53
SCFD1-224ENST00000557713 GATAD1Q8WUU5 269 aa11.72□□□□□ -0.53
SCFD1-224ENST00000557713 TXN2Q99757 166 aa11.72□□□□□ -0.53
SCFD1-224ENST00000557713 C6orf62Q9GZU0 229 aaPredicted RBP11.72□□□□□ -0.53
SCFD1-224ENST00000557713 FXYD6Q9H0Q3 95 aa11.72□□□□□ -0.53
SCFD1-224ENST00000557713 C15orf61A6NNL5 157 aa11.71□□□□□ -0.53
SCFD1-224ENST00000557713 MPTX1A8MV57 137 aa11.71□□□□□ -0.53
SCFD1-224ENST00000557713 GPR31O00270 319 aa11.71□□□□□ -0.53
SCFD1-224ENST00000557713 MFAP4P55083 255 aa11.71□□□□□ -0.53
SCFD1-224ENST00000557713 RELQ04864 619 aaPredicted RBP11.71□□□□□ -0.53
SCFD1-224ENST00000557713 LYSMD2Q8IV50 215 aa11.71□□□□□ -0.53
SCFD1-224ENST00000557713 TSPAN14Q8NG11 270 aa11.71□□□□□ -0.53
SCFD1-224ENST00000557713 OR5H2Q8NGV7 314 aa11.71□□□□□ -0.53
SCFD1-224ENST00000557713 OR6F1Q8NGZ6 308 aa11.71□□□□□ -0.53
SCFD1-224ENST00000557713 SLC25A46Q96AG3 418 aa11.71□□□□□ -0.53
SCFD1-224ENST00000557713 TSC22D3Q99576 134 aa11.71□□□□□ -0.53
SCFD1-224ENST00000557713 RARRES2Q99969 163 aa11.71□□□□□ -0.53
SCFD1-224ENST00000557713 IGHV3-49A0A0A0MS15 119 aa11.7□□□□□ -0.54
SCFD1-224ENST00000557713 TRAV14DV4A0A0A6YYC5 116 aa11.7□□□□□ -0.54
SCFD1-224ENST00000557713 NUPL2O15504 423 aaKnown RBP11.7□□□□□ -0.54
SCFD1-224ENST00000557713 DEDDO75618 318 aa11.7□□□□□ -0.54
SCFD1-224ENST00000557713 TFPI2P48307 235 aa11.7□□□□□ -0.54
SCFD1-224ENST00000557713 TAS2R46P59540 309 aa11.7□□□□□ -0.54
SCFD1-224ENST00000557713 TAS2R20P59543 309 aa11.7□□□□□ -0.54
SCFD1-224ENST00000557713 CROCCP3Q8IVE0 287 aa11.7□□□□□ -0.54
SCFD1-224ENST00000557713 NXF2Q9GZY0 626 aaKnown RBP11.7□□□□□ -0.54
SCFD1-224ENST00000557713 Q9H521 79 aa11.7□□□□□ -0.54
SCFD1-224ENST00000557713 FAM212BQ9NTI7 297 aaPredicted RBP11.7□□□□□ -0.54
SCFD1-224ENST00000557713 HERC2O95714 4834 aa11.7□□□□□ -0.54
SCFD1-224ENST00000557713 VPS13DQ5THJ4 4388 aa11.7□□□□□ -0.54
SCFD1-224ENST00000557713 YIF1AO95070 293 aa11.69□□□□□ -0.54
SCFD1-224ENST00000557713 TGFBR1P36897 503 aa11.69□□□□□ -0.54
SCFD1-224ENST00000557713 NEDD8Q15843 81 aa11.69□□□□□ -0.54
SCFD1-224ENST00000557713 UBE2NLQ5JXB2 153 aa11.69□□□□□ -0.54
SCFD1-224ENST00000557713 TMEM69Q5SWH9 247 aa11.69□□□□□ -0.54
SCFD1-224ENST00000557713 ZNF114Q8NC26 417 aa11.69□□□□□ -0.54
SCFD1-224ENST00000557713 MISP3Q96FF7 219 aa11.69□□□□□ -0.54
SCFD1-224ENST00000557713 SEC22AQ96IW7 307 aa11.69□□□□□ -0.54
SCFD1-224ENST00000557713 IGKV3-7A0A075B6H7 116 aa11.68□□□□□ -0.54
SCFD1-224ENST00000557713 IGHV3OR16-13A0A075B7E8 117 aa11.68□□□□□ -0.54
SCFD1-224ENST00000557713 IGHV3-74A0A0B4J1X5 117 aa11.68□□□□□ -0.54
SCFD1-224ENST00000557713 ATP6V1G2O95670 118 aa11.68□□□□□ -0.54
SCFD1-224ENST00000557713 MT-CO2P00403 227 aa11.68□□□□□ -0.54
SCFD1-224ENST00000557713 IGKV1-39P01597 117 aa11.68□□□□□ -0.54
SCFD1-224ENST00000557713 IGKV1D-39P04432 117 aa11.68□□□□□ -0.54
SCFD1-224ENST00000557713 PRSS3P35030 304 aa11.68□□□□□ -0.54
SCFD1-224ENST00000557713 RPS19P39019 145 aaKnown RBP11.68□□□□□ -0.54
SCFD1-224ENST00000557713 NANOS2P60321 138 aaKnown RBP11.68□□□□□ -0.54
SCFD1-224ENST00000557713 PHLDA2Q53GA4 152 aa11.68□□□□□ -0.54
SCFD1-224ENST00000557713 GBGT1Q8N5D6 347 aa11.68□□□□□ -0.54
SCFD1-224ENST00000557713 SAMD12Q8N8I0 201 aa11.68□□□□□ -0.54
SCFD1-224ENST00000557713 OR11H2Q8NH07 326 aa11.68□□□□□ -0.54
SCFD1-224ENST00000557713 C11orf45Q8TAV5 145 aa11.68□□□□□ -0.54
SCFD1-224ENST00000557713 CMTM3Q96MX0 182 aa11.68□□□□□ -0.54
SCFD1-224ENST00000557713 C11orf68Q9H3H3 251 aaKnown RBP11.68□□□□□ -0.54
SCFD1-224ENST00000557713 IGHV3-48P01763 117 aa11.67□□□□□ -0.54
SCFD1-224ENST00000557713 HLA-DMAP28067 261 aa11.67□□□□□ -0.54
SCFD1-224ENST00000557713 HRH1P35367 487 aa11.67□□□□□ -0.54
SCFD1-224ENST00000557713 PRCDQ00LT1 54 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms