RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 TMEM65Q6PI78 240 aa11.9□□□□□ -0.5
NEDD1-213ENST00000557644 C18orf65Q6ZTR6 163 aa11.9□□□□□ -0.5
NEDD1-213ENST00000557644 OR2C3Q8N628 320 aa11.9□□□□□ -0.5
NEDD1-213ENST00000557644 ZBTB8BQ8NAP8 495 aaPredicted RBP11.9□□□□□ -0.5
NEDD1-213ENST00000557644 A0A1W2PRX2 142 aa11.9□□□□□ -0.51
NEDD1-213ENST00000557644 TCRBV4S1A1TA0A5B7 111 aa11.9□□□□□ -0.51
NEDD1-213ENST00000557644 TRGV3P03979 118 aa11.9□□□□□ -0.51
NEDD1-213ENST00000557644 DEFA4P12838 97 aa11.9□□□□□ -0.51
NEDD1-213ENST00000557644 MFAP2P55001 183 aa11.9□□□□□ -0.51
NEDD1-213ENST00000557644 TPPP2P59282 170 aa11.9□□□□□ -0.51
NEDD1-213ENST00000557644 KIAA0141Q14154 515 aaPredicted RBP11.9□□□□□ -0.51
NEDD1-213ENST00000557644 COMMD1Q8N668 190 aa11.9□□□□□ -0.51
NEDD1-213ENST00000557644 RNF152Q8N8N0 203 aa11.9□□□□□ -0.51
NEDD1-213ENST00000557644 FANCD2OSQ96PS1 177 aa11.9□□□□□ -0.51
NEDD1-213ENST00000557644 SCGB1D2O95969 90 aa11.89□□□□□ -0.51
NEDD1-213ENST00000557644 GSG1LQ6UXU4 331 aa11.89□□□□□ -0.51
NEDD1-213ENST00000557644 HSD17B13Q7Z5P4 300 aaPredicted RBP11.89□□□□□ -0.51
NEDD1-213ENST00000557644 WDR89Q96FK6 387 aaPredicted RBP11.89□□□□□ -0.51
NEDD1-213ENST00000557644 P2RX4Q99571 388 aa11.89□□□□□ -0.51
NEDD1-213ENST00000557644 ENY2Q9NPA8 101 aa11.89□□□□□ -0.51
NEDD1-213ENST00000557644 DNHD1Q96M86 4753 aa11.89□□□□□ -0.51
NEDD1-213ENST00000557644 H2BFSP57053 126 aa11.89□□□□□ -0.51
NEDD1-213ENST00000557644 POLR2GP62487 172 aaKnown RBP eCLIP11.89□□□□□ -0.51
NEDD1-213ENST00000557644 ERHP84090 104 aaKnown RBP11.89□□□□□ -0.51
NEDD1-213ENST00000557644 ID3Q02535 119 aa11.89□□□□□ -0.51
NEDD1-213ENST00000557644 DTD1Q8TEA8 209 aa11.89□□□□□ -0.51
NEDD1-213ENST00000557644 HEYLQ9NQ87 328 aaPredicted RBP11.89□□□□□ -0.51
NEDD1-213ENST00000557644 F11RQ9Y624 299 aaKnown RBP11.89□□□□□ -0.51
NEDD1-213ENST00000557644 OR2J3O76001 311 aa11.88□□□□□ -0.51
NEDD1-213ENST00000557644 IAPPP10997 89 aa11.88□□□□□ -0.51
NEDD1-213ENST00000557644 NKX2-1P43699 371 aaPredicted RBP11.88□□□□□ -0.51
NEDD1-213ENST00000557644 MYOZ3Q8TDC0 251 aa11.88□□□□□ -0.51
NEDD1-213ENST00000557644 C2orf50Q96LR7 162 aa11.88□□□□□ -0.51
NEDD1-213ENST00000557644 MGAT4CQ9UBM8 478 aa11.88□□□□□ -0.51
NEDD1-213ENST00000557644 TRBV9A0A0B4J1U6 114 aa11.87□□□□□ -0.51
NEDD1-213ENST00000557644 ADARB2-AS1A8MUL3 147 aa11.87□□□□□ -0.51
NEDD1-213ENST00000557644 FAM90A26D6RGX4 464 aa11.87□□□□□ -0.51
NEDD1-213ENST00000557644 INS-IGF2F8WCM5 200 aa11.87□□□□□ -0.51
NEDD1-213ENST00000557644 H3BUA1 57 aa11.87□□□□□ -0.51
NEDD1-213ENST00000557644 CXCL3P19876 107 aa11.87□□□□□ -0.51
NEDD1-213ENST00000557644 RHOGP84095 191 aa11.87□□□□□ -0.51
NEDD1-213ENST00000557644 OR5B12Q96R08 314 aa11.87□□□□□ -0.51
NEDD1-213ENST00000557644 SLA2Q9H6Q3 261 aa11.87□□□□□ -0.51
NEDD1-213ENST00000557644 VWFP04275 2813 aa11.87□□□□□ -0.51
NEDD1-213ENST00000557644 IGLV11-55A0A075B6I3 123 aa11.87□□□□□ -0.51
NEDD1-213ENST00000557644 SYNGR2O43760 224 aa11.87□□□□□ -0.51
NEDD1-213ENST00000557644 IGHV3-11P01762 117 aa11.87□□□□□ -0.51
NEDD1-213ENST00000557644 MBPP02686 304 aaPredicted RBP11.87□□□□□ -0.51
NEDD1-213ENST00000557644 SNCAP37840 140 aa11.87□□□□□ -0.51
NEDD1-213ENST00000557644 FCN2Q15485 313 aa11.87□□□□□ -0.51
NEDD1-213ENST00000557644 NSUN5P1Q3KNT7 163 aa11.87□□□□□ -0.51
NEDD1-213ENST00000557644 SLC25A24Q6NUK1 477 aa11.87□□□□□ -0.51
NEDD1-213ENST00000557644 ZNF491Q8N8L2 437 aa11.87□□□□□ -0.51
NEDD1-213ENST00000557644 CACFD1Q9UGQ2 172 aa11.87□□□□□ -0.51
NEDD1-213ENST00000557644 WRBO00258 174 aa11.86□□□□□ -0.51
NEDD1-213ENST00000557644 NDUFB8O95169 186 aa11.86□□□□□ -0.51
NEDD1-213ENST00000557644 RNASE2P10153 161 aaKnown RBP11.86□□□□□ -0.51
NEDD1-213ENST00000557644 RPL23AP62750 156 aaKnown RBP11.86□□□□□ -0.51
NEDD1-213ENST00000557644 MRPL41Q8IXM3 137 aaKnown RBP11.86□□□□□ -0.51
NEDD1-213ENST00000557644 OR11H7Q8NGC8 314 aa11.86□□□□□ -0.51
NEDD1-213ENST00000557644 MED28Q9H204 178 aa11.86□□□□□ -0.51
NEDD1-213ENST00000557644 GNB4Q9HAV0 340 aa11.86□□□□□ -0.51
NEDD1-213ENST00000557644 TSSC4Q9Y5U2 329 aaPredicted RBP11.86□□□□□ -0.51
NEDD1-213ENST00000557644 S4R3C0 116 aa11.86□□□□□ -0.51
NEDD1-213ENST00000557644 SSSCA1O60232 199 aa11.86□□□□□ -0.51
NEDD1-213ENST00000557644 BRI3O95415 125 aa11.86□□□□□ -0.51
NEDD1-213ENST00000557644 IL15RAQ13261 267 aa11.86□□□□□ -0.51
NEDD1-213ENST00000557644 SHISA2Q6UWI4 295 aa11.86□□□□□ -0.51
NEDD1-213ENST00000557644 ZNF114Q8NC26 417 aa11.86□□□□□ -0.51
NEDD1-213ENST00000557644 OR1P1Q8NH06 330 aa11.86□□□□□ -0.51
NEDD1-213ENST00000557644 TMEM170AQ8WVE7 144 aa11.86□□□□□ -0.51
NEDD1-213ENST00000557644 HIPK2Q9H2X6 1198 aa11.86□□□□□ -0.51
NEDD1-213ENST00000557644 FBXL7Q9UJT9 491 aa11.86□□□□□ -0.51
NEDD1-213ENST00000557644 RCL1Q9Y2P8 373 aaKnown RBP11.86□□□□□ -0.51
NEDD1-213ENST00000557644 IGHV3-21A0A0B4J1V1 117 aa11.85□□□□□ -0.51
NEDD1-213ENST00000557644 C15orf32Q32M92 178 aa11.85□□□□□ -0.51
NEDD1-213ENST00000557644 BSXQ3C1V8 233 aa11.85□□□□□ -0.51
NEDD1-213ENST00000557644 MED6O75586 246 aa11.85□□□□□ -0.51
NEDD1-213ENST00000557644 TMEM50AO95807 157 aa11.85□□□□□ -0.51
NEDD1-213ENST00000557644 NECAP1Q8NC96 275 aa11.85□□□□□ -0.51
NEDD1-213ENST00000557644 KLHL30-AS1Q8NEE0 82 aa11.85□□□□□ -0.51
NEDD1-213ENST00000557644 SLC24A4Q8NFF2 622 aa11.85□□□□□ -0.51
NEDD1-213ENST00000557644 MISP3Q96FF7 219 aa11.85□□□□□ -0.51
NEDD1-213ENST00000557644 UBE2E2Q96LR5 201 aa11.85□□□□□ -0.51
NEDD1-213ENST00000557644 ZFP57Q9NU63 452 aa11.85□□□□□ -0.51
NEDD1-213ENST00000557644 LSM5Q9Y4Y9 91 aaKnown RBP11.85□□□□□ -0.51
NEDD1-213ENST00000557644 H3BP45 60 aa11.84□□□□□ -0.51
NEDD1-213ENST00000557644 IGHV3-23P01764 117 aa11.84□□□□□ -0.51
NEDD1-213ENST00000557644 HTR2BP41595 481 aa11.84□□□□□ -0.51
NEDD1-213ENST00000557644 CDX1P47902 265 aaPredicted RBP11.84□□□□□ -0.51
NEDD1-213ENST00000557644 RRAS2P62070 204 aaPredicted RBP11.84□□□□□ -0.51
NEDD1-213ENST00000557644 RAB32Q13637 225 aa11.84□□□□□ -0.51
NEDD1-213ENST00000557644 KLK9Q2XQG4 91 aa11.84□□□□□ -0.51
NEDD1-213ENST00000557644 DEFB136Q30KP8 78 aa11.84□□□□□ -0.51
NEDD1-213ENST00000557644 C8orf86Q6ZUL3 223 aa11.84□□□□□ -0.51
NEDD1-213ENST00000557644 KLK9Q9UKQ9 250 aa11.84□□□□□ -0.51
NEDD1-213ENST00000557644 MFSD2BA6NFX1 497 aa11.84□□□□□ -0.51
NEDD1-213ENST00000557644 K7EPK0 472 aa11.84□□□□□ -0.51
NEDD1-213ENST00000557644 IFNA10P01566 189 aa11.84□□□□□ -0.51
NEDD1-213ENST00000557644 IGHV3-48P01763 117 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms